NA ----> NA
Intron 1 GTAGGCAATA ... GTTACTATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 25 | 9 | 4 | 2 |
| A2 | 15.15 | 14 | 1 | 4 |
| A3 | 20 | 2 | 1 | 0 |
| A4 | 7.69 | 6 | 0 | 1 |
| A5 | 33.33 | 2 | 0 | 2 |
| A6 | 24.14 | 11 | 1 | 6 |
| A7 | 25.37 | 25 | 5 | 12 |
| A8 | 9.68 | 14 | 0 | 3 |
| A9 | 16.67 | 15 | 1 | 5 |
| A10 | 16.67 | 30 | 3 | 9 |
>TRINITY_DN39036_c0_g1_i1 from sample A7 / Example spliced isoformGGAAAGCCGAATCCTTCATTCATGTAATCTTGTTTCTTATGCGCGATGGTGTGCAACTTCTGCAACGCTTAACAGGCACTCTCGGACGATTTGGGTGTTTTCGTTGCATTGATTCTGCTCTGCAGGCTTCAAAATTCTTCAAAGAAGGATTTGAAGGAGAATTTTATATGCGTACTACTCATCAGTTTCTCTGTTGTTTG
AATCCTTTATGGCTATGAGGTATCAAGGCGTTAATTCGGAGATTCTGCATCATTATCCAAGCAATAATGGGAAGAAACCCCTTGTGAAAATATGCAGCAAGGATAATAATGTTGAGAACGGCAGTAGTAGGCATCTGAATAGAGGAAGTTTGGAAGGAAAAGGAACGATGAACATTCCGGGACTGAGGATCAAAGGAGCA
TCCTCATCAAAGAGAAGTCCTGACAATGTTGGCATCGTTAAAGAGCAAGAACATGATAACAGAAATGGGAACGCGAATGCTGTGCCTGACCCATCGGAGCAGCCTGTTGAAGGGAATCAACCCTCCAAGGATCCAAAAGAAGGTGGTAATGTGCTGTTTCAGTGGTGTACAAAGAAGAGGCCTCGAGGCCACAGAACTGA
ATCCAGAAGTTTGCTGGAGGATTCTAACATTCAGAGTAGGAAATCTATAAAAGTAGAACGCCAAGCTACGAAATCTGAAAAACAGCGAGTGCAAACCCATGTAACGATTCATTCAAGGAGCACCACTTTAAGGCCTTGCACTCCTCTCCGAGAGCCTAGTCATGGATTCATCAAAAGGAGTTCTGAAGATTTTAATGGTG
CCCACCTTCTAAACAATGGGCTTCAGCAAAGGGTTGATAGGCATTCATCATCACCTATAGAGAAACATACCAAAGCAGTTGGTTGCTTCAGTCAAAATGCCATTGGGACCACGAGAGCATTTGATGCGGTCCGGAATTCCACACCATCTGATACAGAGGCCTGTGCACCTCCAGAGAAGATAGATATGGAAACATTTGAA
TGGCCAAGAATTTTGCTACAATTGTCCCGGAAAGAAAAGGAGGATGATTTTCTTATCATGAAAGGCACCAAACTTTCCCAGCGACCTAAAAAGCGGCCCAAGCATGTTGAGAAGGTTATACAGAATTGCTTTCCTGGGAATTGGCTCTCAGATTTAGCAAAGGGACGCTATGAAGTGAGAGAGAAAAAATGTAATAAGAA
GAAACCAAGGGGTCTGAAGGCAATGGAAAGTTCAGACAGTGATTCAGACTGATGTGGCTGTGCATGAACAAATACCCAAGTTCTGCTAATTAATTCTACAGATTCCAGCTAAGTCTTTGTACTCTGTAAAATAGCGGTGGATTGATTGCAAATTTTTGAGGGAGAGTTCTGCTGGAAAGCTGCTCTGCAGTTGCAATCAA
TGTGGCATTTACTTTGACTACATTTTTCAAATGATCTGGTGAGATCTGCTTTGAAAATCATGTATAAAATCTAGAATCTAGATCTTTAGGATTATATGTCATTGTAGCCATCAATGGCCTTCCTGCACAAGTTTTAAAGGTGACCTGCAGGGAATGAGTTCCGGCACAGCCATTCAAGACAGTGAGAATGGCTTCTTGTA
TTTACTTCTGGATTTGTAGAGATTTTGAACAATAAATTCATTCTATTTCTAAAATCATTTAATCTTTGTGTTGGGCAACTGGTTGTCTTGTAAGCAAGACAATTCTTTGTAGATATGTTGGGAGATTTGTTGGATGATATTCATTTCACAGGTTAAACATAAAATTGTAGGCAACTATTGTGAGGATTAACTAATTGTTT
ATCCGACAGGGTTTTATTTGACACACAGAACTTTATCGATGAACAATGACCCAATGATTTACCTATTATGGCTTGGTGTTGTAATTTGATTATGGCAAGCTTGGAAAAATGAAATCGTGTTGCCAACCTTCTCAAGCAATACAGGTCTGTGGTTTGTACTGCAATGTACCTTTGAGAAAACTGTTTTATGGGCATTCAAT
GTCATGGACAGCTTGGGTCCTTCAATTGCAACGCAAAACAATAGCATGTGATCTGGTCTTGTTCTTTTTTCGTTCCTATGAAAACAGTCAAAGTAGAATAGGTTAAGTATTCTAGTAACAACTCCAACCACATCACATAAGGTTGCTATTTTTTTCATGAGGTCACAATATGGTCTTATTTCTGTGAGGATGAACCAATT
TTGTGAATTTTGTCCTTGATTAACTAAATATCATCCATGTTCTTCCACATATAATATTCAATTTTTAATTTATTGAAAGACATTTAGTGGATTTCTTTCAAGTTCATTTCAGCAATAGCAGGAATAGATACGAG
>TRINITY_DN39036_c0_g1_i2 from sample A7 / Example unspliced isoform:GGAAAGCCGAATCCTTCATTCATGTAATCTTGTTTCTTATGCGCGATGGTGTGCAACTTCTGCAACGCTTAACAGGCACTCTCGGACGATTTGGGTGTTTTCGTTGCATTGATTCTGCTCTGCAGGCTTCAAAATTCTTCAAAGAAGGATTTGAAGGAGAATTTTATATGCGTACTACTCATCAGTTTCTCTGTTGTTTG
AATCCTTTATGGCTATGAGGTATCAAGGCGTTAATTCGGAGATTCTGCATCATTATCCAAGCAATAATGGGAAGAAACCCCTTGTGAAAATATGCAGCAAGGATAATAATGTTGAGAACGGCAGTAGTAGGCATCTGAATAGAGGAAGTTTGGAAGGAAAAGGAACGATGAACATTCCGGGACTGAGGATCAAAGGAGCA
TCCTCATCAAAGAGAAGTCCTGACAATGTTGGCATCGTTAAAGAGCAAGAACATGATAACAGAAATGGGAACGCGAATGCTGTGCCTGACCCATCGGAGCAGCCTGTTGAAGGGAATCAACCCTCCAAGGATCCAAAAGAAGGTGGTAATGTGCTGTTTCAGTGGTGTACAAAGAAGAGGCCTCGAGGCCACAGAACTGA
ATCCAGAAGTTTGCTGGAGGATTCTAACATTCAGAGTAGGAAATCTATAAAAGTAGAACGCCAAGCTACGAAATCTGAAAAACAGCGAGTGCAAACCCATGTAACGATTCATTCAAGGAGCACCACTTTAAGGCCTTGCACTCCTCTCCGAGAGCCTAGTCATGGATTCATCAAAAGGAGTTCTGAAGATTTTAATGGTG
CCCACCTTCTAAACAATGGGCTTCAGCAAAGGGTTGATAGGCATTCATCATCACCTATAGAGAAACATACCAAAGCAGTTGGTTGCTTCAGTCAAAATGCCATTGGGACCACGAGAGCATTTGATGCGGTCCGGAATTCCACACCATCTGATACAGAGGCCTGTGCACCTCCAGAGAAGATAGATATGGAAACATTTGAA
TGGCCAAGAATTTTGCTACAATTGTCCCGGAAAGAAAAGGAGGATGATTTTCTTATCATGAAAGGCACCAAACTTTCCCAGCGACCTAAAAAGCGGCCCAAGCATGTTGAGAAGGTTATACAGgtaggcaatacagtggatacatctcaattaattgtcattctattttctttatgtacacaagcatggaaggaaggagt
gtttatagctgacatgctttttgttctgttactatagAATTGCTTTCCTGGGAATTGGCTCTCAGATTTAGCAAAGGGACGCTATGAAGTGAGAGAGAAAAAATGTAATAAGAAGAAACCAAGGGGTCTGAAGGCAATGGAAAGTTCAGACAGTGATTCAGACTGATGTGGCTGTGCATGAACAAATACCCAAGTTCTGC
TAATTAATTCTACAGATTCCAGCTAAGTCTTTGTACTCTGTAAAATAGCGGTGGATTGATTGCAAATTTTTGAGGGAGAGTTCTGCTGGAAAGCTGCTCTGCAGTTGCAATCAATGTGGCATTTACTTTGACTACATTTTTCAAATGATCTGGTGAGATCTGCTTTGAAAATCATGTATAAAATCTAGAATCTAGATCTT
TAGGATTATATGTCATTGTAGCCATCAATGGCCTTCCTGCACAAGTTTTAAAGGTGACCTGCAGGGAATGAGTTCCGGCACAGCCATTCAAGACAGTGAGAATGGCTTCTTGTATTTACTTCTGGATTTGTAGAGATTTTGAACAATAAATTCATTCTATTTCTAAAATCATTTAATCTTTGTGTTGGGCAACTGGTTGT
CTTGTAAGCAAGACAATTCTTTGTAGATATGTTGGGAGATTTGTTGGATGATATTCATTTCACAGGTTAAACATAAAATTGTAGGCAACTATTGTGAGGATTAACTAATTGTTTATCCGACAGGGTTTTATTTGACACACAGAACTTTATCGATGAACAATGACCCAATGATTTACCTATTATGGCTTGGTGTTGTAATT
TGATTATGGCAAGCTTGGAAAAATGAAATCGTGTTGCCAACCTTCTCAAGCAATACAGGTCTGTGGTTTGTACTGCAATGTACCTTTGAGAAAACTGTTTTATGGGCATTCAATGTCATGGACAGCTTGGGTCCTTCAATTGCAACGCAAAACAATAGCATGTGATCTGGTCTTGTTCTTTTTTCGTTCCTATGAAAACA
GTCAAAGTAGAATAGGTTAAGTATTCTAGTAACAACTCCAACCACATCACATAAGGTTGCTATTTTTTTCATGAGGTCACAATATGGTCTTATTTCTGTGAGGATGAACCAATTTTGTGAATTTTGTCCTTGATTAACTAAATATCATCCATGTTCTTCCACATATAATATTCAATTTTTAATTTATTGAAAGACATTTA
GTGGATTTCTTTCAAGTTCATTTCAGCAATAGCAGGAATAGATACGAG