NA ----> NA
Intron 1 GTAAACCAAT ... TGGGATTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 1 | 6 |
| A2 | 50 | 3 | 0 | 3 |
| A3 | 100 | 0 | 0 | 3 |
| A4 | 60 | 2 | 1 | 3 |
| A5 | 100 | 0 | 0 | 4 |
| A6 | 62.07 | 11 | 2 | 18 |
| A7 | 66 | 17 | 4 | 33 |
| A8 | 66.67 | 3 | 0 | 6 |
| A9 | 58.62 | 12 | 3 | 17 |
| A10 | 55.17 | 13 | 0 | 16 |
>TRINITY_DN36362_c0_g1_i2 from sample A7 / Example spliced isoformGGTAGATAGAACTTGTTGTACGTGACCGAAAAAGAAGAAAGTGAACGTCAAGAGATAAACTTGGAGGATGGTCGATGAAGATTCCAAAAATAACCCGGAAAAACAAGCCAGAGAAGTGAGTACAGAAGTATTCTGTTCCTTCTGAAGTATGTAATACGCTGATTCTGTCAGACTTTGGTGGCTTTTGGATATTCAGATCT
CTCCATGTGGAAAATCATTATTTAATTTACGAGCTAGGATCTGCGTGAAAAAGGGATATATGCAACCATAAGAAGAAACAGTAGAAGATGAAAAGATGGGATCCTTAAATTTACGGCCTTTTTGAGCTTTGGATCCAGATGATTACAGATTCAAGCAATCAAGTTTAGGATTTAGATTTTAATAGTGGCCTTTCTACCAA
ACTTGACAAAATTATCTGCAAGATGCACTTCAGAAACCTAGAAGAGTTTTGGGCATTTTATATGAACCAGCACAGTAAGGCTTCGACAAGACGTTGGCATTTTTGTGGCATGTTGGCAGCTGGGTTCTTCTTGCTTGCAGCTATCTTGATTAAATGGTGGCTTGGCTTCTTTGTTCCAATTTTTGGGTATGGGCTTGCCT
GGTACAGCCATTTTTTCATTGAGGGCAATGTTCCTGCTAGCTTTGGGCATCCTGTTTGGTCATTTTTATGTGACTTTAAAATGTTTGGATTAATGCTTACTGGTAAAATGGACCGAGAAATCAAGAGACTTGGGAAGAGGCCTATATTGCAGGTCTTATAGGAATCGCAGGACATTCATATAATAGGGAATGGTACTTAG
GTGACTTTATCGTAATAGATTCTAATGTCTGCAACTTCTCAAGCTAAAAGAGTCCACAGTTGGAAAAACAAGATGTGATCGGGGCAGAACTCTGTAAAAAGTTCCGTTGTAAGGTATGTCTGGTATTTTCTGATTGTGAAAGTAGGCCTCGTTGCAGGTATTGCAACATAAATATGTCCCTCAATAAGAAAATTTGACTT
CAAAGAGCTCTGAAGTGTAGCAGTTCTGATAAAGATTTAAAATGTCATTGGATTTCAAAGGCAAAATGACACTGTTGAAATTTGCAAATATAGGTGTATTTTGTGG
>TRINITY_DN36362_c0_g1_i3 from sample A7 / Example unspliced isoform:GGTAGATAGAACTTGTTGTACGTGACCGAAgtaaaccaataactaaacttcttcgcatgttgtaccatgatttctggaattttattataataccgattttttgattcattgatttgtttgttgggatttagAAAGAAGAAAGTGAACGTCAAGAGATAAACTTGGAGGATGGTCGATGAAGATTCCAAAAATAACCCGGA
AAAACAAGCCAGAGAAGTGAGTACAGAAGTATTCTGTTCCTTCTGAAGTATGTAATACGCTGATTCTGTCAGACTTTGGTGGCTTTTGGATATTCAGATCTCTCCATGTGGAAAATCATTATTTAATTTACGAGCTAGGATCTGCGTGAAAAAGGGATATATGCAACCATAAGAAGAAACAGTAGAAGATGAAAAGATGG
GATCCTTAAATTTACGGCCTTTTTGAGCTTTGGATCCAGATGATTACAGATTCAAGCAATCAAGTTTAGGATTTAGATTTTAATAGTGGCCTTTCTACCAAACTTGACAAAATTATCTGCAAGATGCACTTCAGAAACCTAGAAGAGTTTTGGGCATTTTATATGAACCAGCACAGTAAGGCTTCGACAAGACGTTGGCA
TTTTTGTGGCATGTTGGCAGCTGGGTTCTTCTTGCTTGCAGCTATCTTGATTAAATGGTGGCTTGGCTTCTTTGTTCCAATTTTTGGGTATGGGCTTGCCTGGTACAGCCATTTTTTCATTGAGGGCAATGTTCCTGCTAGCTTTGGGCATCCTGTTTGGTCATTTTTATGTGACTTTAAAATGTTTGGATTAATGCTTA
CTGGTAAAATGGACCGAGAAATCAAGAGACTTGGGAAGAGGCCTATATTGCAGGTCTTATAGGAATCGCAGGACATTCATATAATAGGGAATGGTACTTAGGTGACTTTATCGTAATAGATTCTAATGTCTGCAACTTCTCAAGCTAAAAGAGTCCACAGTTGGAAAAACAAGATGTGATCGGGGCAGAACTCTGTAAAA
AGTTCCGTTGTAAGGTATGTCTGGTATTTTCTGATTGTGAAAGTAGGCCTCGTTGCAGGTATTGCAACATAAATATGTCCCTCAATAAGAAAATTTGACTTCAAAGAGCTCTGAAGTGTAGCAGTTCTGATAAAGATTTAAAATGTCATTGGATTTCAAAGGCAAAATGACACTGTTGAAATTTGCAAATATAGGTGTAT
TTTGTGG