NA ----> NA
Intron 1 GCGCCAGGCT ... CTTTGAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 38.47 | 21.8 | 8.3 | 13.7 |
| A2 | 18.75 | 26 | 5.8 | 6 |
| A3 | 19.05 | 34 | 16.2 | 8 |
| A4 | 22.22 | 21 | 3.3 | 6 |
| A5 | 7.69 | 12 | 5.8 | 1 |
| A6 | 21.71 | 165.8 | 45.5 | 46 |
| A7 | 19.74 | 107 | 29.2 | 26.3 |
| A8 | 27.41 | 120 | 30.2 | 45.3 |
| A9 | 22.25 | 121.2 | 27.5 | 34.7 |
| A10 | 19.18 | 99 | 27.7 | 23.5 |
>TRINITY_DN111401_c0_g1_i1 from sample A1 / Example spliced isoformCTACAATCATCACCCACCAGTCTACTCCTGCACTGTTCCATATCAGAATGGAATCATCCTCCACTTCCTCTCCCAACAAAATACTAGTCTGCGGAGGAGGGGTTATAGGCGCCTGCACCGCTTACTTCCTTGCCAAGAGAGGAGCCCAGGTGACCCTGGTGGAGAAATCCGACATAGCATGCGCGGCCTCGGGCAAGGCT
GGGGGTTTCCTGGCCTTAGACTGGTGCGACGGGGGCCCGGTCTCCTCTCTTGCCAGGGCCAGCTTCCTTTTACACCAACAGCTTGCCGAGGAACTCGACGGTCCTTCCACTTACGGCTATCGGCGATTGAACACTCTCAGTCTCGGCATTCAAGAACAACCCACCTCGAATTCAGAGAAATCGGAGCTCATTCCATCGTG
GGTCGATGGCGATGGTGCTGCCAATCCTGTATCCATCGGAACCCCTCAGACGACTGCGCAAGTTCATCCCCAGCTCTTTACCAGTGCGGTTCTCTCGGCCGCGGTTGAGAAGTATAAGGTTAACGTGGTCATGGGGGAAGTTCAGAAGCTGGAATTGGAGGGGGGCAATGTGGTTCGTGGGGTGGTTGTTGATGGAAAAC
TGTTGCGGGGGGATTCTGTTGTTCTGGCACTTGGGCCCTGGTCTTCCAAGAACGAAGTGATTTCGGGTCTGTTCAGGATATCGGGATTGAAGGCTCACAGCATTGTCCTCAGGCCACAGAACCCGGCGGCTATCGGACCACATGCTCTGTTTCTCAAGTACATGACTGCTCAGGGAAGATCCTTGGATCCTGAGGTGTAC
CCCCGTCCTACAGGTGAAGTATACATTTGTGGCATGTCAGAGGAAGTAGAAGTCCCAGATGATCCCCAGCAAGTTTTACCTAGAAAGGAATCTATAACAATGCTTCAGAGGGTAGCTCAAGCAGTATCAAGTCAATTAGCAAATGCAGAACTTCAAGCAGAACAGGCTTGCCTTTTGCCATGTTCTGATGATGGCAGGCC
AGTTATTGGTAAAATACCTGATATAAATGGTGCTTATGTAGCTACAGGTCACAGCTGCTGGGGCATACTCAATGCACCTGCTACTGGTGCATCTTTGGCAGAACTTATTGTAGATGGTCATTCAAAAATTATAGATTTGAAGCCCTTTGATCCTGCTAGGTTTAGGAGGGCAACTCGGAAGATTTAAATATTTTAGTACT
ACAAGAACATCGTGTTTATCCTACCTTTCTTATGTCTATAGTGGTCAATCTCCAAAGAAACACATTATGTACTTATAGAATTGGTAGTAAAATAATTAAACCTCCATGTTGCTTCAGTCATTAGCAACTATTTTAGGGTTTTGTTGTAACCTTCTACACTTGCTTATTGTGTAAATTGTTTAAAGAAATCAGAGGAATCC
ATACCTTTTGACTTCAATGTTTATGCACCTCTTCCGTTGAAGTAGATATCCAAGTTGATTAATGTTCATGCTGTG
>TRINITY_DN111401_c0_g1_i3 from sample A1 / Example unspliced isoform:CTACAATCATCACCCACCAGTCTACTCCTGCACTGTTCCATATCAGAATGGAATCATCCTCCACTTCCTCTCCCAACAAAATACTAGTCTGCGGAGGAGGGGTTATAGGCGCCTGCACCGCTTACTTCCTTGCCAAGAGAGGAGCCCAGGTGACCCTGGTGGAGAAATCCGACATAGCATGCGCGGCCTCGGGCAAGGCT
GGGGGTTTCCTGGCCTTAGACTGGTGCGACGGGGGCCCGGTCTCCTCTCTTGCCAGGGCCAGCTTCCTTTTACACCAACAGCTTGCCGAGGAACTCGACGGTCCTTCCACTTACGGCTATCGGCGATTGAACACTCTCAGTCTCGGCATTCAAGAACAACCCACCTCGAATTCAGAGAAATCGGAGCTCATTCCATCGTG
GGTCGATGGCGATGGTGCTGCCAATCCTGTATCCATCGGAACCCCTCAGACGACTGCGCAAGTTCATCCCCAGCTCTTTACCAGTGCGGTTCTCTCGGCCGCGGTTGAGAAGTATAAGGTTAACGTGGTCATGGGGGAAGTTCAGAAGCTGGAATTGGAGGGGGGCAATGTGGTTCGTGGGGTGGTTGTTGATGGAAAAC
TGTTGCGGGGGGATTCTGTTGTTCTGGCACTTGGGCCCTGGTCTTCCAAGAACGAAGTGATTTCGGGTCTGTTCAGGATATCGGGATTGAAGGCTCACAGCATTGTCCTCAGGCCACAGAACCCGGCGGCTATCGGACCACATGCTCTGTTTCTCAAGTACATGACTGCTCAGGGAAGATCCTTGGATCCTGAGGTGTAC
CCCCGTCCTACAGgcgccaggctcttattttatttatcttggggagaaaatacttgggcaactttgaacagGTGAAGTATACATTTGTGGCATGTCAGAGGAAGTAGAAGTCCCAGATGATCCCCAGCAAGTTTTACCTAGAAAGGAATCTATAACAATGCTTCAGAGGGTAGCTCAAGCAGTATCAAGTCAATTAGCAA
ATGCAGAACTTCAAGCAGAACAGGCTTGCCTTTTGCCATGTTCTGATGATGGCAGGCCAGTTATTGGTAAAATACCTGATATAAATGGTGCTTATGTAGCTACAGGTCACAGCTGCTGGGGCATACTCAATGCACCTGCTACTGGTGCATCTTTGGCAGAACTTATTGTAGATGGTCATTCAAAAATTATAGATTTGAAG
CCCTTTGATCCTGCTAGGTTTAGGAGGGCAACTCGGAAGATTTAAATATTTTAGTACTACAAGAACATCGTGTTTATCCTACCTTTCTTATGTCTATAGTGGTCAATCTCCAAAGAAACACATTATGTACTTATAGAATTGGTAGTAAAATAATTAAACCTCCATGTTGCTTCAGTCATTAGCAACTATTTTAGGGTTTT
GTTGTAACCTTCTACACTTGCTTATTGTGTAAATTGTTTAAAGAAATCAGAGGAATCCATACCTTTTGACTTCAATGTTTATGCACCTCTTCCGTTGAAGTAGATATCCAAGTTGATTAATGTTCATGCTGTG