sp|Q84X53|MTEF1_ARATH ----> Transcription termination factor MTEF1, chloroplastic
Intron 1 GTACAGAAGA ... CTTGTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 0 | 2 |
| A2 | 66.48 | 1.8 | 4 | 2.8 |
| A3 | 77.78 | 1 | 3 | 4 |
| A4 | 42.86 | 2 | 3 | 0 |
| A5 | 100 | 0 | 6 | 3 |
| A6 | 52.1 | 19.8 | 28 | 14.8 |
| A7 | 68.03 | 7 | 15 | 14 |
| A8 | 40.65 | 8.8 | 7 | 4.8 |
| A9 | 54.77 | 16.3 | 23 | 14.5 |
| A10 | 48.53 | 12.8 | 15 | 8.8 |
>TRINITY_DN42269_c0_g2_i2 from sample A6 / Example spliced isoformCTCTTCTGCGATTTGTTATGAACGAAAGATCACTCTCATCAAAATATTTGTTATGAACGAAAGATCATATCTAATGCGATGACCATGTCCGCCAAGTACTTGGCTTCATCTCTGGGATCTCAGCGTTGGCCCCTGCCGCCGCCGGCGGCGGCGTTGGCATTTCCCCAAATTATTTAATTTTGTTAAGATTGTCACGGCTT
TCTACAACTATCGCTGGTAACGACAAGTCCACAGGCTACCAAGAAACAAAGAATACAAACCCCGTTTTAGAATTCTTACTCAATGAATGTGGCCTGTGTCAGTCTGAGCTCTCAACTATCCTTAAAATAAGGCCATCTTTGGTTGCGAGACGATCTACTCATACAGCCCGTCAAGCGGTTCACTTATTGAGGGATTCAGG
ATTCACAGAACAGCAGGTAAGGAAGGCTATTACCAGAAACCCATCTATTCTTTGTCTCAATGCTGATCGACATTTAAAACCCAAGTTTGAGTTCATGAAAACACTGGGCCTCACTGAACACGACTTCGGAAGTGTCATATCCAATGGATCCAGATTGCTTAGTAGCAACCTCGAGAAAACTCTATGTCCCAGGTTAATGC
TTCCAGTATCTTCAAAACCTGTTCGGATCAGAGGTTAATGCTTCCAATGTTTTCAAATCCGCACCTCAAATTCTAGTTAAAAGCAACGGGCCTGAAGTTTGGGAAAAGAAATTGAAGCATTTGACAAGTTTTGGCCTCCTGGAAGATGAGATCAAGGAGCTTGTTAGGAAGCACCCACTTATATTAAATGCTTCCATGGA
TAAGCTTGGAGTGTAGGATAAAGCCTCGCCACAAGGTGTTGAGTGCTGTTAGTGAAATGCAACCTTCCAAGCGTCCTCCTGGTGTCATCAATGCGCTTCGTTTAAGCGAGAAGAAGTTCCTCGAAAAATATGTCCACTGCAGTCCTCATGCCAAAAAGTTACTTGAAATTTACCGTGCCCCTCTTCCAAAAGACTAGATA
TTCGGGTTTCTGTTTTGGTCAGGGTTAGATTGTCTTGTATTGCTCTTATTGATTGAAAGAGATTCAAGTACATTAAGCAAGAAATTATCGGGTTTCTATTTTGGTCAGGGTTAGATTGTCTTGTATTGCTCTTATTGATTGAAAGAGATTCAAGTACATTAAGCAAGAAATTATC
>TRINITY_DN42269_c0_g2_i1 from sample A6 / Example unspliced isoform:CTCTTCTGCGATTTGTTATGAACGAAAGATCACTCTCATCAAAATATTTGTTATGAACGAAAGATCATATCTAATGCGATGACCATGTCCGCCAAGTACTTGGCTTCATCTCTGGGATCTCAGCGTTGGCCCCTGCCGCCGCCGGCGGCGGCGTTGGCATTTCCCCAAATTATTTAATTTTGTTAAGATTGTCACGGCTT
TCTACAACTATCGCTGGTAACGACAAGTCCACAGGCTACCAAGAAACAAAGAATACAAACCCCGTTTTAGAATTCTTACTCAATGAATGTGGCCTGTGTCAGTCTGAGCTCTCAACTATCCTTAAAATAAGGCCATCTTTGGTTGCGAGACGATCTACTCATACAGCCCGTCAAGCGGTTCACTTATTGAGGGATTCAGG
ATTCACAGAACAGCAGGTAAGGAAGGCTATTACCAGAAACCCATCTATTCTTTGTCTCAATGCTGATCGACATTTAAAACCCAAGTTTGAGTTCATGAAAACACTGGGCCTCACTGAACACGACTTCGGAAGTGTCATATCCAATGGATCCAGATTGCTTAGTAGCAACCTCGAGAAAACTCTATGTCCCAGGTTAATGC
TTCCAGTATCTTCAAAACCTGTTCGGATCAGAGGTTAATGCTTCCAATGTTTTCAAATCCGCACCTCAAATTCTAGTTAAAAGCAACGGGCCTGAAGTTTGGGAAAAGAAATTGAAGCATTTGACAAGTTTTGGCCTCCTGGAAGATGAGATCAAGGAGCTTGTTAGGAAGCACCCACTTATATTAAATGCTTCCATGGA
TAAGgtacagaagaatatggactttctcattcatactgcagggcttcctgcaaagtttcttttgacagatccaattttagtgtcttgtttcagCTTGGAGTGTAGGATAAAGCCTCGCCACAAGGTGTTGAGTGCTGTTAGTGAAATGCAACCTTCCAAGCGTCCTCCTGGTGTCATCAATGCGCTTCGTTTAAGCGAGA
AGAAGTTCCTCGAAAAATATGTCCACTGCAGTCCTCATGCCAAAAAGTTACTTGAAATTTACCGTGCCCCTCTTCCAAAAGACTAGATATTCGGGTTTCTGTTTTGGTCAGGGTTAGATTGTCTTGTATTGCTCTTATTGATTGAAAGAGATTCAAGTACATTAAGCAAGAAATTATCGGGTTTCTATTTTGGTCAGGGT
TAGATTGTCTTGTATTGCTCTTATTGATTGAAAGAGATTCAAGTACATTAAGCAAGAAATTATC