sp|Q9LT23|BH121_ARATH ----> Transcription factor bHLH121


Intron 1 GTTAGTACCT ... TCTGTTTCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A116.672537
A218.18913
A318.751324
A411.111221
A5-1000
A614.633539
A724.85621427
A818.071021530
A920.36881431
A1018.9245714



>TRINITY_DN37304_c0_g1_i1 from sample A7 / Example spliced isoform
CAAAAAGGTCCGGAGACAAAGATCCTCCACTTTGTAAAAGAATGTAGCTACTGTGAAATTCATTTAAATGGTCCCTTCCGAGTCCCGACCACTACTGGCCATGCAAACGGACATTCTTTCATCCATCGGCATTGCCAGCAACTGGCCGCAGACGCGGAATTCGAAGGATAAAATCTAATCTTCTTAAAAATGCCGGCAAA
TTCGATCGACGCCCACGTATCATCTTGCCAACCTATCAGCGAAAATCTTCTTGCCGACTTTAATGAGATTCCTGAGTTTTGCCCCTGTGAAAGCACTGATCAAATCCTGGACTTTGATGTCCAGTTCTGCAATGCCAAATCCTGATCGGCCGAAAAATGACAAGGCTTCAATACTGATAGAGAGTGTGCAAGTCATCAAG
GAGCTTAGAGTTGAGTTAAAGCGGCTACAAGATGAGCATGCTTTGCTTATGGATGAATCTCGGGAATTGACTGAAGAAAAAAATGAGCTTAAAGGGGAGAAGGCAGCTATAAAGAGTGAGACAGATCAGCTACAAGATCAGTTCCAGCAACACTTACAGATCATTTCATCATGGATGATGATGGACCCTGCTGTCATAAT
GAGTGCTGCATCTTTTCCTTATCCTTTGGCTGTTCCTCAAGTGGCACCTGTGCCTTCATCAAACTGTCAGCAACCATTCGCATCAAACCAAGCTCAAAGGCCACTTGTTGCACCTCCTCCATATGTTCCCCTTGCAACCATAGGTGCTTTTCCACTTCATCCTGGACTGCATACATATGCTGCCTTTGGAAACAGCCATG
CAGATGGGAGCAGCCCCTATCTACCGTTTCCAAATTATGGTCAATCCTTGAATGTCCATTCCCATGTTGAAAGGCCATATGTGCAGCACTCTTCACAATTGCATCCTATGCCTTCATGTCTTGCCCAGATGCAATCTCACCAAGGCTATCAATCTCCAGTTTCTTCATCTGGTCCAGGTTTAGAAATATGTAAACCTTGT
GCATCTGTTGCATCCAGTGCTGCAGTCAAAATTCAAGATAAGTCCAGTCCTGCAAGCTCCCAAAATCTGGATGATGAAGGTGGTGGAAAGTATGCAAGCTCCCTATCCCCAGTAGATGATGCTGTCATGGAGCATAGAGACTCTTGCAGAATTGCAGTTAGCTGTGGTTCTGAGACTTTGGCAAACGATATGGACAAGCA
ACTTTTATCATCCTCTTCTTCTTCCTTTTCAGAAGCCCTTTATGGATCCACTGTAGAGGTTACTGATGTGAAACTAGAAGATAAAACAACTGTTGAGCAAGGAACTATTGGACAAGTACGTGAAATAACAGCTGAACAGGGAATATTATTAGCTAGAGTGGATAAACCAAAAGCAGATAGTAGGAATGATATTCAGTCAG
GGAATATGGAATAGAAAATATGGGATGAGTTAGCATATCCTATCATTTATGCCAAATCAAGTCTCAGAGTAGAACCCTGTGCAAGTTCAAGAAGAGTTCTATTTGCAGATTATGATATTGGATCAAGTTGGGTTTTTAGCTTCATTGTACTTACAATTATAGTAATAGCCATTTCATCACTAGATACAAAAGGGTTGGAA
GCATTTCATTTATTTATAAATAATTTTAAGAACTAAATTTAGAAGAGAAGAAAATCAGTTAAAATGAGTTTTTAAAACTATGATTGCAGTAATTTTCCTCAAATGATAGATCATTGGAGTGGTGTATTGCATTGACTTAGCCATAGGTAAACATCAGCTTAGATAATATTTTGTATTGATTCGAAGAAGAAGTGTTTAAA
GTCTTGATTATTTTTTTGTGATTCAGAGGAAGG


>TRINITY_DN37304_c0_g1_i2 from sample A7 / Example unspliced isoform:
CAAAAAGGTCCGGAGACAAAGATCCTCCACTTTGTAAAAGAATGTAGCTACTGTGAAATTCATTTAAATGGTCCCTTCCGAGTCCCGACCACTACTGGCCATGCAAACGGACATTCTTTCATCCATCGGCATTGCCAGCAACTGGCCGCAGACGCGGAATTCGAAGGATAAAATCTAATCTTCTTAAAAATGCCGGCAAA
TTCGATCGACGCCCACGTATCATCTTGCCAACCTATCAGCGAAAATCTTCTTGCCGACTTTAATGAGATTCCTGAGTTTTGCCCCTGTGAAAGCACTGATCAAATCCTGGACTTTGATGTCCAGTTCTGCAATGCCAATGGTGGTAACAGAGTATTTTCTAGAAAATCACACAAGGCAGACAGGGAGAAGCTGAGAAGAG
AGAAAATAAATGAGCAATTTGCTGAGCTGGCCTCTGCGCTGGATCCTGATCGGCCGAAAAATGACAAGGCTTCAATACTGATAGAGAGTGTGCAAGTCATCAAGGAGCTTAGAGTTGAGTTAAAGCGGCTACAAGATGAGCATGCTTTGCTTATGGATGAATCTCGGGAATTGACTGAAGAAAAAAATGAGCTTAAAGGG
GAGAAGGCAGCTATAAAGAGTGAGACAGATCAGCTACAAGATCAGTTCCAGCAACACTTACAGATCATTTCATCATGGATGATGATGGACCCTGCTGTCATAATGAGTGCTGCATCTTTTCCTTATCCTTTGGCTGTTCCTCAAGTGGCACCTGTGCCTTCATCAAACTGTCAGCAACCATTCGCATCAAACCAAGCTCA
AAGGCCACTTGTTGCACCTCCTCCATATGTTCCCCTTGCAACCATAGGTGCTTTTCCACTTCATCCTGGACTGCATACATATGCTGCCTTTGGAAACAGCCATGCAGATGGGAGCAGCCCCTATCTACCGTTTCCAAATTATGGTCAATCCTTGAATGTCCATTCCCATGTTGAAAGGCCATATGTGCAGCACTCTTCAC
AATTGCATCCTATGCCTTCATGTCTTGCCCAGATGCAATCTCACCAAGGCTATCAATCTCCAGTTTCTTCATCTGGTCCAGGTTTAGAAATATGTAAACCTTGTGCATCTGTTGCATCCAGTGCTGCAGTCAAAATTCAAGATAAGTCCAGTCCTGCAAGCTCCCAAAATCTGGATGATGAAGGTGGTGGAAAGTATGCA
AGCTCCCTATCCCCAGTAGATGATGCTGTCATGGAGCATAGAGACTCTTGCAGAATTGCAGTTAGCTGTGGTTCTGAGACTTTGGCAAACGATATGGACAAGCAACTTTTATCATCCTCTTCTTCTTCCTTTTCAGAAGCCCTTTATGGATCCACTGTAGAGgttagtaccttatttatcattttggacttttacattca
tcatggaatttttttcctcatatgggatgcctataatgtaaaatgttctctcttcatttcattctctcaatagaaatcagaatgatatctctgtttcagGTTACTGATGTGAAACTAGAAGATAAAACAACTGTTGAGCAAGGAACTATTGGACAAGTACGTGAAATAACAGCTGAACAGGGAATATTATTAGCTAGAGT
GGATAAACCAAAAGCAGATAGTAGGAATGATATTCAGTCAGGGAATATGGAATAGAAAATATGGGATGAGTTAGCATATCCTATCATTTATGCCAAATCAAGTCTCAGAGTAGAACCCTGTGCAAGTTCAAGAAGAGTTCTATTTGCAGATTATGATATTGGATCAAGTTGGGTTTTTAGCTTCATTGTACTTACAATTA
TAGTAATAGCCATTTCATCACTAGATACAAAAGGGTTGGAAGCATTTCATTTATTTATAAATAATTTTAAGAACTAAATTTAGAAGAGAAGAAAATCAGTTAAAATGAGTTTTTAAAACTATGATTGCAGTAATTTTCCTCAAATGATAGATCATTGGAGTGGTGTATTGCATTGACTTAGCCATAGGTAAACATCAGCT
TAGATAATATTTTGTATTGATTCGAAGAAGAAGTGTTTAAAGTCTTGATTATTTTTTTGTGATTCAGAGGAAGG



Intron 2 GTTGGTTATA ... TTATTTGCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A129.8280234
A223.5881225
A316.2872014
A429.2970029
A516.6750010
A630.312920127
A727.333434129
A826.59243088
A924.8285194
A1026.34274098



>TRINITY_DN40191_c2_g1_i2 from sample A6 / Example spliced isoform
TTTAGCTGTCATACATTTGTATGAGATTGGGCGTCAAATTTCAAGGAGAGTCTTTGAAATCCCATGTGGCATGCAATATTCTCGCTGCCCATTCCCCACCTAAAAGCATCGGGCAGTATAAAGTGCCCCATCACCTCAAACACTCAAAAAGAAATTCATTTCCCGAGCTTGTTGCTTTTCTTGATCTTATTGTTTGATGG
TGTTTGATTTTGCCCTCTGCTAAATGATACCTGCCCTTGATTGATCACTGGGGTTGCTTTCCACATACCCTTTCACCCAAATCCACATATACATTCTAAGTGGGCTCTTGAGTGCATCTGAAGCAGGGCTGTACTCAGTCTTGCTTTCCTTGTAATTCTGGATATATAGCTTTATCTGCTGCTTTTAACCTTCATACATT
CTATATTGCATTGGGGATTATTGGGAGTTGGGAATCCTTGCAGAGGCACATACATTGTTGGGCATTCTTGCAGATAGAGATATACATTGTTGGGCATTCGAGATGGCCGCAGCAGCAAACATAGGGATGATGGACAGTGCCTATTTTGTAGGCAGGAATGAGATTCTGTCATGGATCAACACTACTCTGCAACTCAACCT
CGGCAAAGTGGAGGAGGCAGCTTCAGGTGCAGTTCAGTGCCAAATGATGGATATGATTCACCCAGGAGTTGTCCCTATGCACAAGGTGAATTTCGAAGCAAAGACAGAATACGATATGATCCAGAATTACAAATTGCTGCAAGAAGTATTTTCAAAATTAAAAATAGAGAAGCATATAGAGGTTAATAAACTTGTTAAAG
GTCGACCGTTGGACAATCTGGAACTTCTCCAGTGGTTGAAGCGGTACTGTGATTCTGCAACAGGTGGAATAATGAATAGCAATTATAATCCTGTGGAGAGAAGATGTAAAGGAGGAAAGGAAGTCCACAGAAAGGGAGTGTCTTCAATGCAATGCTTGTCCCAAAATAAGGGCATTGGAGGAATTTTAAAATCAGTTCAA
TCTAGCTCATCTTCAGCAATTCGACGTACAGATGGATCTGGGGCTGGTCCAAGTGGAATTAAGCAAGGGAAGCATGTTTCAGTGCCTCCTGGGTATGTTTCTGTAGAGCACGTTCAAGCTGTGAGTGAACAGGTTTCAGAATTAAAGCTTTCTGTGAGCAATTTAGAGAAGGAAAGGGATTTCTACTTTGCTAAACTTCG
AGATATAGAAATCCTCATTCAAAATGAGGAGTTGGAGCAGCTTCCAGTATGTGCTGTATATAATTTAATGATATCTTTTTGTAGGGTT


>TRINITY_DN40191_c2_g1_i10 from sample A6 / Example unspliced isoform:
GGCTGGTCCAAGTGgttggttatattttaactagaaacattctcattgccttgggtcaagagctcccattctgcagcatctattagtgagcagttctactgatctgaataattgaatttatcttttttaatttatttgcagGAATTAAGCAAGGGAAGCATGTTTCAGTGCCTCCTGGGTATGTTTCTGTAGAGCACGTT
CAAGCTGTGAGTGAACAGGTTTCAGAATTAAAGCTTTCTGTGAGCAATTTAGAGAAGGAAAGGGATTTCTACTTTGCTAAACTTCGAGATATAGAAATCCTCATTCAAAATGAGGAGTTGGAGCAGCTTCCAGTGGTAGCAGCCATTCAGAAAATTTTGTATGCTGTAGATGATAACGATTCAGTGATTGCTGATGCTCA
GGCAATACTTGGCAAATCTCTGTTGCCTGAGAACGGGCCAAAGGACACCAACGAAAAGGGTTCCTTCAACGAGAGAAGTGAGATGGATACCCTTGCACCAGTAGACAGATCTGAATCAGAAAGTGGGGGACAGACTAACCTTTCTCCACGAAAGCTTAGAAACTTATTTGTTTATTCTACCAGCAGTGGTGATCAAGTGC
AGCCTGTTTCCCCTGTAAGTGTGCAATGATATAGCTGATCTACGTGGGTGTAAAAATACTACCACTGGAACTTTACTACAGATTGCACATAAACATGGTATATTCTTACTTGAGTAATGACTTTTCTGACAAAAGAAGACTATTAAGGGAACTCTTGCATGGACAAATTAACCAGCTGATAAAAGGCCTTTAATAGCCTG
AGTTTTGTATCTAGTCCACAATGAAGTTATTTTCATTCTTCTGGGCTATCAAAGGGTGTTCTGGAAGTTTGTAGATATGCTTAGCTACATTACGAAAAATAATCCTCAGCTACTGTGATATTTACAAAAGCATTGATGTAACATAAAACTATTCAGTTTTGTTCCTCTGTTAAATTTTTGACATGCGAGAATATGATCTG
GAAGGTTTTTTGTTGTCTTTGTTGTGTTTTTTACCGTTATATTTGTGCAGTACAAGGATTGTTTTGACACTAGTTAAGTGTGACACCATGC