NA ----> NA
Intron 1 GTAAGTAATA ... ATCTGTATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 3 | 0 | 3 |
| A2 | 52.38 | 5 | 3 | 8 |
| A3 | 23.08 | 5 | 0 | 3 |
| A4 | 33.33 | 4 | 3 | 1 |
| A5 | 33.33 | 1 | 1 | 0 |
| A6 | 27.5 | 29 | 12 | 10 |
| A7 | 28.3 | 38 | 13 | 17 |
| A8 | 29.59 | 69 | 23 | 35 |
| A9 | 22.54 | 55 | 13 | 19 |
| A10 | 25.81 | 46 | 14 | 18 |
>TRINITY_DN48405_c0_g1_i1 from sample A10 / Example spliced isoformCAAACGTCTCTGTTGTGTTTTCTTGGAAGTGCTTTCATTGTGTGTATATCTGCTTGGGCGCCTCGGTCTAAGTCCTGAGTTTGTCTGTGTGTGGGTTTTAATGTCTGTCATGTGTCTGTATGCGATAGAAGAGGCTGGACTGAAGGGGAATTGTTTTTGGGAGCAGACAACTTTAAGGGACAGGCGGGCCGCGGAAGGAC
GCGGTCAGGTTGCTCGAGAGTGTTTTTTTGCTCTTTATATTTGCTTTGCCTTTGTCTTGGCGGGCTTGGCTTGGGTTGGCTTTCCTCTGTCCCGATGGAAAGCTAAGAAGAAAATAAAAACTGAGCATGAGGCTGGATTCGTTTCCCTTTCCTTTGGAAGGAAGGCATAATCAGATCGGGTAATCCGATTGGTTGTTCAA
AACGCTCGTCTTTCCCTGAACATGCTACTGAAACTCCAGGATTTCGATCTCAAATTCTGGATCTGCATTGTTTGATTAACCTGCTGACTCTGTTTTAGGGTTTGAGATCTGTTTTAGTAGGAGCTAGACTGGAAGGGAATTGATTTTGAGCCGCAAACAACTTCATTAAGGGAAGGCGCAAAAAGACGTGGTCGGGATTT
TAGCTTATGGATATTAGTGCCCTCTGTCAAATGGTGTGTATTTATTTAAAGATCTGCTCTGCTTTGCTCTGGTATGTATCCATTTAACGCTCTCTTTTCTTGTGTAAATTTATCAGGAATCTTGATTTAATCTGTGCGATCTCTCTATTTTAAATTTCATTCCCAATCATTTCTTTGTTTCTTCATTACACTTTCCTGAG
GGTTGGGTTTGACTTTGTTCACTTCCTATGGAGAGATGGGAAGAAAGTACTGAATCAGTCCAACGCGTGTTTGATTTAAGATTTGAGATGTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAAAATGTTTTTTGAGATCTGTTATTAATAATTTTTAAACTTTTTTTTGCCTCTTC
CTATATTCTGGACAAGAGCCAGCAGAATCCAATCTGTTTGTGTTATAGTCTGTATCTCAAATCCCAGCGCTCTGTTTGTGTAGGTTTACTTCCATATTGTTATTGTGTTAGTCTGCATACATCCACCTCCACCTATTTTAAGATTGTTACAACATTTCTTTCTTAGTTTGTATATTATATATGCTTTAAGAATTTATATG
TCGACCTATGTATTTGCTCTCTGTTTATTTTTTATTTGTTATATACGATTCGGTCTCTTACTTCATATTTTTAAATGTTCTCTTACTATTTTATAGCAATGATGAAATGTGTTATCCCTTGCAACAATAAGTAAATAGTTTAAGTAAAAACGCTGGGGACC
>TRINITY_DN48405_c0_g1_i2 from sample A10 / Example unspliced isoform:CAAACGTCTCTGTTGTGTTTTCTTGGAAGTGCTTTCATTGTGTGTATATCTGCTTGGGCGCCTCGGTCTAAGTCCTGAGTTTGTCTGTGTGTGGGTTTTAATGTCTGTCATGTGTCTGTATGCGATAGAAGAGGCTGGACTGAAGGGGAATTGTTTTTGGGAGCAGACAACTTTAAGGGACAGGCGGGCCGCGGAAGGAC
GCGGTCAGGTTGCTCGAGAGTGTTTTTTTGCTCTTTATATTTGCTTTGCCTTTGTCTTGGCGGGCTTGGCTTGGGTTGGCTTTCCTCTGTCCCGATGGAAAGCTAAGAAGAAAATAAAAACTGAGCATGAGGCTGGATTCGTTTCCCTTTCCTTTGGAAGGAAGGCATAATCAGATCGGGTAATCCGATTGGTTGTTCAA
AACGCTCGTCTTTCCCTGAACATGCTACTGAAACTCCAGGATTTCGATCTCAAATTCTGGATCTGCATTGTTTGATTAACCTGCTGACTCTGTTTTAGGGTTTGAGATCTGTTTTAGgtaagtaataaattttatgttgatcatatatgcctgagatctgttatgtttgagatctgtatagTAGGAGCTAGACTGGAAGG
GAATTGATTTTGAGCCGCAAACAACTTCATTAAGGGAAGGCGCAAAAAGACGTGGTCGGGATTTTAGCTTATGGATATTAGTGCCCTCTGTCAAATGGTGTGTATTTATTTAAAGATCTGCTCTGCTTTGCTCTG
Intron 2 GTATATATGT ... GTCTGTATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.71 | 59 | 29 | 14 |
| A2 | 40.21 | 29 | 25 | 14 |
| A3 | 32.47 | 26 | 15 | 10 |
| A4 | 40.19 | 32 | 24 | 19 |
| A5 | 21.13 | 28 | 8 | 7 |
| A6 | 26.83 | 155.5 | 80 | 34 |
| A7 | 26.38 | 213.5 | 100 | 53 |
| A8 | 27.68 | 196 | 100 | 50 |
| A9 | 24.93 | 143 | 67 | 28 |
| A10 | 24.64 | 182 | 89 | 30 |
>TRINITY_DN121661_c0_g1_i3 from sample A2 / Example spliced isoformCCTCTATCAAATGTCTCTGTTGTGTTTTTTTGGAAGCGCTTCCATTGTGTGTTGGGCGTCTGGGTCTGAGTTCTGTGTTTGTCTGTGTTTGCGGTTTAATGTTTGTCATCTGTTTGTATGGGATAGAGGAGGCTGGCCTGAAAGAGAATTGTGTCTGGGAGCAAACAACTTCAAGGGACGGGCGGAAGGACGCGGTCAGG
TTGCTCAAGGGTTTTTTTGGTCAGAAAGATCTATGATCTTTATATTTGCTAGCTTCCTCTTTAATTTAGACATCAGATCTGCTTTGCCAAGGCCTGGTTTAGTTCTCTCTTTCTCTTGGTGAATTCATTTGAGGATTCTTTATTTAATTTCTTTGTCATTTCATCTTTGCCTTTTCCTTGGGGTTTGGGCTTGGCTTTCC
TCTGTTCTGATGGAAAGCTAAGAAGAAAAGAATAGCTGAGTACGAGGCCGAAGTCGTTGTCCTTGCTTTTGGAATGAAAGCATAATCAGATCGGCTAATCTGGTCCTTGCTGCAACTCCAGAATAGGGAGGATCTAGACTGGAGAGGGATTGATTTTGAGCCGCAAATAACTTCAAAGGAAGGGCAAAAAGACGTGGTCA
GGTTTTTAGCTGATGGAAATGAGTGCTCTCTGTCAAATGGTTAAAGATCTGCTCTGCTTTGCTCAGGTATGTATCGATCATAAAACTAAAACATAGACTTTGGATTATGTTCTCAGGCTACCACATACTTCAATACAAACTGAAAATTCAAATACCTAAAAATAAATCTCATTTAGTGATGAAAGAAGCACGATCCTCAA
AATCGTATTACAATCTAAAATCAAAATGCCGAAGTACTTATTCAGCGATCAGCTGCCACAGAAACCCTACTCAGCCTGCTCGGCTTTCTCTGGAAATTTCTTCTGCGGATCTTCTGAGAGCCCGAAGGACGGATCGATAACAGCAAAGCCCTCCGCGCAACTTCTCCCTGGACGGAAATTACTCCCGGC
>TRINITY_DN121661_c0_g1_i5 from sample A2 / Example unspliced isoform:CCTCTATCAAATGTCTCTGTTGTGTTTTTTTGGAAGCGCTTCCATTGTGTGTTGGGCGTCTGGGTCTGAGTTCTGTGTTTGTCTGTGTTTGCGGTTTAATGTTTGTCATCTGTTTGTATGGGATAGAGGAGGCTGGCCTGAAAGAGAATTGTGTCTGGGAGCAAACAACTTCAAGGGACGGGCGGAAGGACGCGGTCAGG
TTGCTCAAGGGTTTTTTTGGTCAGAAAGATCTATGATCTTTATATTTGCTAGCTTCCTCTTTAATTTAGACATCAGATCTGCTTTGCCAAGGCCTGGTTTAGTTCTCTCTTTCTCTTGGTGAATTCATTTGAGGATTCTTTATTTAATTTCTTTGTCATTTCATCTTTGCCTTTTCCTTGGGGTTTGGGCTTGGCTTTCC
TCTGTTCTGATGGAAAGCTAAGAAGAAAAGAATAGCTGAGTACGAGGCCGAAGTCGTTGTCCTTGCTTTTGGAATGAAAGCATAATCAGATCGGCTAATCTGGTCCTTGCTGCAACTCCAGgtatatatgtatttcaatctcaaattatggatctgcattgtttgattaacctgctgactctgttttagggtttgagatc
tgttttaggtacgtaataaatttaatgtttgccatatgtctgtatagAATAGGGAGGATCTAGACTGGAGAGGGATTGATTTTGAGCCGCAAATAACTTCAAAGGAAGGGCAAAAAGACGTGGTCGGGTTTTTATCTTATGGAAATCAATGCTCTCTGTCAAATGGTTAAAGATCTGCTCTGCTTTGCTCTGACTTGCCT
GAGGGTTGGGTTCGACTTTGTTCTGTTCCTATGGAGGACTGGGAAGAAAGTTCAAAGGACTGAATCAGATTTCGGAGGCTTGGGTTTGATTTAAGTTTG
Intron 3 GTATGTATCG ... GCTGCCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 1 | 0 | 1 |
| A2 | 62.5 | 6 | 6 | 14 |
| A3 | 42.86 | 4 | 5 | 1 |
| A4 | 33.33 | 4 | 2 | 2 |
| A5 | 31.03 | 10 | 0 | 9 |
| A6 | 51.48 | 41 | 15 | 72 |
| A7 | 46.74 | 49 | 25 | 61 |
| A8 | 44.33 | 54 | 31 | 55 |
| A9 | 56.36 | 36 | 32 | 61 |
| A10 | 41.79 | 39 | 14 | 42 |
>TRINITY_DN44953_c0_g1_i7 from sample A9 / Example spliced isoformGTCTCTGTTGTGTTTTCTTGGAAGTGCTTTCATTGTGTGTATATCTGCTTGGGCGCCTCGGTCTAAGTCCTGAGTTTGTCTGTGTGTGGGTTTTAATGTCTGTCATGTGTCTGTATGCGATAGAAGAGGCTGGACTGAAGGGGAATTGTTTTTGGGAGCAGACAACTTTAAGGGACAGGCGGGCCGCGGAAGGACGCGGT
CAGGTTGCTCGAGAGTGTTTTTTTGCTCTTTATATTTGCTTTGCCTTTGTCTTGGCGGGCTTGGCTTGGGTTGGCTTTCCTCTGTCCCGATGGAAAGCTAAGAAGAAAATAAAAACTGAGCATGAGGCTGGATTCGTTTCCCTTTCCTTTGGAAGGAAGGCATAATCAGATCGGGTAATCCGATTGGTTGTTCAAAACGC
TCGTCTTTCCCTGAACATGCTACTGAAACTCCAGGATTTCGATCTCAAATTCTGGATCTGCATTGTTTGATTAACCTGCTGACTCTGTTTTAGGGTTTGAGATCTGTTTTAGTAGGAGCTAGACTGGAAGGGAATTGATTTTGAGCCGCAAACAACTTCATTAAGGGAAGGCGCAAAAAGACGTGGTCGGGATTTTAGCT
TATGGATATTAGTGCCCTCTGTCAAATGGTGTGTATTTATTTAAAGATCTGCTCTGCTTTGCTCAGAAACCCTACTCAGCCTGCTCGGCTTTCTCTGGAAATTTCTTCTGCGGATCTTCTGAGAGCCCGAAGGACGGATCGATAACAGCAAAGCCCTCCGCGCAACTTCTCCCTGGACGGAAATTACTCCCGATCTCCGC
GCAGGCGACTGATCTGATCCCTCTTTCTTCCATGACCTGTTACCACTCAGCTGATGGCGTCTCAGCCCCTGGCCGCATCCCGTCTCAGGCATCGGAATTCTGGGCCTGTGGAGGCCACATCTCATCGAAGGAGAACACATGCATGCCGTTCTTGCCATTGATTTTCTTTGTCTGGACCGGCTTGATGATCTGACAAGCTA
TTAACTAGAACTAATGCGGCGCGGTTCGATCCCTAGACCTGCAGGAGCTCTTGACCGAAAGGAGATAATGTAAAAAGGAGAGAATACTGCGGAGTATTATAGCCATCGGATTATGAAATGCGTACGGGCGTTGAAGCCATCGAGAATGTGCGCGCTGAAGTGGCTTGCAGCCTGCAGGGTTTATGGAAAGCGTGAGGGGG
CCAAATTGCCAATGGCCATGGCGTGGTTGAATACCTAGTTTAAATTCTTAATGTCCTTAGGAGAATTATGTGGTTGGTAAATGTCTAATCAATTTTTCGGTTGGAGGGAGTTGTCGGAATGGGCGCGTTTTCAAAAGCTATTTCAAATCTTTTGTTTAGTCTAAAGTTTTCGGTGATAAATATGGTACAATAATTTTAAA
GTTTCAAGAGAGGGTTTTGAGGGTGTTACATTATTAGAAATCCCCAAAATTATTAATCGAAT
>TRINITY_DN44953_c0_g1_i2 from sample A9 / Example unspliced isoform:GTCTCTGTTGTGTTTTCTTGGAAGTGCTTTCATTGTGTGTATATCTGCTTGGGCGCCTCGGTCTAAGTCCTGAGTTTGTCTGTGTGTGGGTTTTAATGTCTGTCATGTGTCTGTATGCGATAGAAGAGGCTGGACTGAAGGGGAATTGTTTTTGGGAGCAGACAACTTTAAGGGACAGGCGGGCCGCGGAAGGACGCGGT
CAGGTTGCTCGAGAGTGTTTTTTTGCTCTTTATATTTGGTAGCTTCCTTTAACTGAGATATCAGATCTGCTTTTCCATGCCCTGGTTCAGCTCTCTCTTTCTTTATTTAGTTTCTCTGTCATTTCAGCTTTGCCTTTGTCTTGGGGAATTCATTTGAGGATTCTTGATTTAATTTCTGTGTCATTTCAGCTTTGCCTTTG
TCTTGGCGGGCTTGGCTTGGGTTGGCTTTCCTCTGTCCCGATGGAAAGCTAAGAAGAAAATAAAAACTGAGCATGAGGCTGGATTCGTTTCCCTTTCCTTTGGAAGGAAGGCATAATCAGATCGGGTAATCCGATTGGTTGTTCAAAACGCTCGTCTTTCCCTGAACATGCTACTGAAACTCCAGGATTTCGATCTCAAA
TTCTGGATCTGCATTGTTTGATTAACCTGCTGACTCTGTTTTAGGGTTTGAGATCTGTTTTAGTAGGAGCTAGACTGGAAGGGAATTGATTTTGAGCCGCAAACAACTTCATTAAGGGAAGGCGCAAAAAGACGTGGTCGGGATTTTAGCTTATGGATATTAGTGCCCTCTGTCAAATGGTGTGTATTTATTTAAAGATC
TGCTCTGCTTTGCTCAGgtatgtatcgatcataaaactaaaacatagactttggattatgttctcaggctaccacatacttcaatacaaactgaaaattcaaatacctaaaaataaatctcatttagtgatgaaagaagcacgatcctcaaaatcgtattacaatctaaaatcaaaatgccgaagtacttattcagcgat
cagctgccacagAAACCCTACTCAGCCTGCTCGGCTTTCTCTGGAAATTTCTTCTGCGGATCTTCTGAGAGCCCGAAGGACGGATCGATAACAGCAAAGCCCTCCGCGCAACTTCTCCCTGGACGGAAATTACTCCCGATCTCCGCGCAGGCGACTGATCTGATCCCTCTTTCTTCCATGACCTGTTACCACTCAGCTGA
TGGCGTCTCAGCCCCTGGCCGCATCCCGTCTCAGGCATCGGAATTCTGGGCCTGTGGAGGCCACATCTCATCGAAGGAGAACACATGCATGCCGTTCTTGCCATTGATTTTCTTTGTCTGGACCGGCTTGATGATCTGACAAGCTATTAACTAGAACTAATGCGGCGCGGTTCGATCCCTAGACCTGCAGGAGCTCTTGA
CCGAAAGGAGATAATGTAAAAAGGAGAGAATACTGCGGAGTATTATAGCCATCGGATTATGAAATGCGTACGGGCGTTGAAGCCATCGAGAATGTGCGCGCTGAAGTGGCTTGCAGCCTGCAGGGTTTATGGAAAGCGTGAGGGGGCCAAATTGCCAATGGCCATGGCGTGGTTGAATACCTAGTTTAAATTCTTAATGT
CCTTAGGAGAATTATGTGGTTGGTAAATGTCTAATCAATTTTTCGGTTGGAGGGAGTTGTCGGAATGGGCGCGTTTTCAAAAGCTATTTCAAATCTTTTGTTTAGTCTAAAGTTTTCGGTGATAAATATGGTACAATAATTTTAAAGTTTCAAGAGAGGGTTTTGAGGGTGTTACATTATTAGAAATCCCCAAAATTATT
AATCGAAT
Intron 4 GTATGTATCA ... GTTTCTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 68.18 | 35 | 77 | 73 |
| A2 | 54.91 | 39 | 46 | 49 |
| A3 | 33.33 | 62 | 27 | 35 |
| A4 | 45.05 | 25 | 21 | 20 |
| A5 | 44 | 14 | 5 | 17 |
| A6 | 29.28 | 646 | 166 | 369 |
| A7 | 41.44 | 407 | 234 | 342 |
| A8 | 35.54 | 653 | 241 | 479 |
| A9 | 29.12 | 662 | 167 | 377 |
| A10 | 34.94 | 365 | 171 | 221 |
>TRINITY_DN49031_c2_g1_i26 from sample A7 / Example spliced isoformCTAGAATGGAAGGGATTTAATTTTGAGCCGCAAACAACTTCAAGGTTTGCTTATGCAAATCAATGCACTCTGTCAAATGGTTAAAGATCTGCTCTGCTTTGCTCTGTAGACTTGCCTGAGGGTTGGGTTAGACTTTGTTCTGTTCCTATGGAGGACTGGGAAGAAAGTTCAAAGGACTGAATCAGATTTCGGAGGCTTGG
GTTTGATTTAAGTTTGGGATCTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAAAATGTTTTTTGAGATCTGTTATTAATAATTTTTAAACTTTTTTTTGCCTCTTCCTATATTCTGGACAAGAGCCAGCAGAATCCAATCTGTTTGTGTTATAGTCTGTATCTCAAATCCCAGCG
CTCTGTTTGTGTAGGTTTACTTCCATATTGTTATTGTGTTAGTCTGCATACATCCACCTCCACCTATTTTAAGATTGTTACAACATTTCTTTCTTAGTTTGTATAT
>TRINITY_DN49031_c2_g1_i23 from sample A7 / Example unspliced isoform:CTAGAATGGAAGGGATTTAATTTTGAGCCGCAAACAACTTCAAGGTTTGCTTATGCAAATCAATGCACTCTGTCAAATGGTTAAAGATCTGCTCTGCTTTGCTCTGgtatgtatcatttaacgctctatttttctgtgtaaatttatcaggaatcttgatttaatctgtgagatccctctattttaaatttcattcccaa
tcaacctttatttgtttcttcagTAGACTTGCCTGAGGGTTGGGTTAGACTTTGTTCTGTTCCTATGGAGGACTGGGAAGAAAGTTCAAAGGACTGAATCAGATTTCGGAGGCTTGGGTTTGATTTAAGTTTGGGATCTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAAAATGT
TTTTTGAGATCTGTTATTAATAATTTTTAAACTTTTTTTTGCCTCTTCCTATATTCTGGACAAGAGCCAGCAGAATCCAATCTGTTTGTGTTATAGTCTGTATCTCAAATCCCAGCGCTCTGTTTGTGTAGGTTTACTTCCATATTGTTATTGTGTTAGTCTGCATACATCCACCTCCACCTATTTTAAGATTGTTACAA
CATTTCTTTCTTAGTTTGTATATTATATATGCTTTAAGAATTTATATGTCGACCTATGTATTTGCTCTCTCTTTATTTTTTATTTGTTATATTCGATTCGGTCTCTTACTTCATATTTTTAAATGTTCATTTATTATTTTATAGAATCTGGAATTACAATGATGAAATATGTGTAGTGTGACCTTATTTTTAGTTATCCC
CTCCTCCAGAATATTGCAACAATAAATAAATAGTTGCATGGGTTTTTTAAAACTTTGATGACATTCGCACTTCAACTTTAGTATTTTGTTTTGTTTTCGTTTCGTTGGCAGTGCAGTAGATTCAATGACAAAATACCACTTGGTGCGTCTCTATATTTTGCATTGATAAATCGATCCCAACTTGTCTTCTTTTTTCAAAT
GAAAATTTAGCTATACTTTATACACACAAAGCCACCAGCAATAAATGAAGCATATGCCGAGCATATAAAATGCCACCAGCAATAACCAGAAACAGTCCAAACTGGACAGAATACATGCCACAGAACCCAGCCCAACTTGTCTTCCTATTCGTATTCTCAGCGTCTTTGTTTTTCTCATTAGTTGTATGCCTTCATTTAAA
CTCCGATCATAGGAAGTTGATATTTAACACGAATTCAATAAGGTTTG
Intron 5 GTAGCTTCCT ... GTCATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 56.16 | 16 | 30 | 11 |
| A2 | 74.19 | 4 | 15 | 8 |
| A3 | 55.56 | 10 | 16 | 9 |
| A4 | 82.61 | 4 | 21 | 17 |
| A5 | 47.37 | 5 | 7 | 2 |
| A6 | 39.57 | 71 | 61 | 32 |
| A7 | 53.44 | 61 | 90 | 50 |
| A8 | 47.1 | 73 | 93 | 37 |
| A9 | 37.65 | 101 | 92 | 30 |
| A10 | 58.39 | 67 | 130 | 58 |
>TRINITY_DN48405_c0_g1_i2 from sample A10 / Example spliced isoformCAAACGTCTCTGTTGTGTTTTCTTGGAAGTGCTTTCATTGTGTGTATATCTGCTTGGGCGCCTCGGTCTAAGTCCTGAGTTTGTCTGTGTGTGGGTTTTAATGTCTGTCATGTGTCTGTATGCGATAGAAGAGGCTGGACTGAAGGGGAATTGTTTTTGGGAGCAGACAACTTTAAGGGACAGGCGGGCCGCGGAAGGAC
GCGGTCAGGTTGCTCGAGAGTGTTTTTTTGCTCTTTATATTTGCTTTGCCTTTGTCTTGGCGGGCTTGGCTTGGGTTGGCTTTCCTCTGTCCCGATGGAAAGCTAAGAAGAAAATAAAAACTGAGCATGAGGCTGGATTCGTTTCCCTTTCCTTTGGAAGGAAGGCATAATCAGATCGGGTAATCCGATTGGTTGTTCAA
AACGCTCGTCTTTCCCTGAACATGCTACTGAAACTCCAGGATTTCGATCTCAAATTCTGGATCTGCATTGTTTGATTAACCTGCTGACTCTGTTTTAGGGTTTGAGATCTGTTTTAGGTAAGTAATAAATTTTATGTTGATCATATATGCCTGAGATCTGTTATGTTTGAGATCTGTATAGTAGGAGCTAGACTGGAAGG
GAATTGATTTTGAGCCGCAAACAACTTCATTAAGGGAAGGCGCAAAAAGACGTGGTCGGGATTTTAGCTTATGGATATTAGTGCCCTCTGTCAAATGGTGTGTATTTATTTAAAGATCTGCTCTGCTTTGCTCTG
>TRINITY_DN48405_c0_g1_i5 from sample A10 / Example unspliced isoform:CAAACGTCTCTGTTGTGTTTTCTTGGAAGTGCTTTCATTGTGTGTATATCTGCTTGGGCGCCTCGGTCTAAGTCCTGAGTTTGTCTGTGTGTGGGTTTTAATGTCTGTCATGTGTCTGTATGCGATAGAAGAGGCTGGACTGAAGGGGAATTGTTTTTGGGAGCAGACAACTTTAAGGGACAGGCGGGCCGCGGAAGGAC
GCGGTCAGGTTGCTCGAGAGTGTTTTTTTGCTCTTTATATTTGgtagcttcctttaactgagatatcagatctgcttttccatgccctggttcagctctctctttctttatttagtttctctgtcatttcagCTTTGCCTTTGTCTTGGGGAATTCATTTGAGGATTCTTGATTTAATTTCTGTGTCATTTCAGCTTTGC
CTTTGT
Intron 6 GTATGTATCC ... GTTTCTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.22 | 48 | 92 | 73 |
| A2 | 51.96 | 49 | 58 | 48 |
| A3 | 32.38 | 71 | 33 | 35 |
| A4 | 41.61 | 40 | 37 | 20 |
| A5 | 40.85 | 21 | 12 | 17 |
| A6 | 30.1 | 728 | 259 | 368 |
| A7 | 40.97 | 500 | 342 | 352 |
| A8 | 35.73 | 770 | 377 | 479 |
| A9 | 30.62 | 768 | 290 | 388 |
| A10 | 36.52 | 398 | 236 | 222 |
>TRINITY_DN48405_c0_g1_i6 from sample A10 / Example spliced isoformATTGTTTGATTAACCTGCTGACTGTATTTTAGGGTTTGAGATCTGTTCTATGTACGTAATAAATTTTGTGTTGGTCATATATGTCTGTATAGATTATAGCAGGAGCTAGAATGGAAGGGATTTAATTTTGAGCCGCAAACAACTTCAAGGTTTGCTTATGGAAATCAATGCTCTCTGTCAAATGGTTAAAGATCTGCTCT
GCTTTGCTCTGTAGACTTGCCTGAGGGTTGGGTTCGACTTTGTTCTGTTCCTATGGAGGACTGGGAAGAAAGTTCAAAGGACTGAATCAGATTTCGGAGGCTTGGGTTTGATTTAAGTTTGAGATCTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAAAATGTTTTTTGAGATCT
GTTATTAATAATTTTTAAACTTTTTTTTGCCTCTTCCTATATTCTGGACAAGAGCCAGCAGAATCCAATCTGTTTGTGTTATAGTCTGTATCTCAAATCCCAGCGCTCTGTTTGTGTAGGTTTACTTCCATATTGTTATTGTGTTAGTCTGCATACATCCACCTCCACCTATTTTAAGATTGTTACAACATTTCTTTCTT
AGTTTGTATATTATATATGCTTTAAGAATTTATATGTCGACCTATGTATTTGCTCTCTGTTTATTTTTTATTTGTTATATACGATTCGGTCTCTTACTTCATATTTTTAAATGTTCTCTTACTATTTTATAGCAATGATGAAATGTGTTATCCCTTGCAACAATAAGTAAATAGTTTAAGTAAAAACGCTGGGGACC
>TRINITY_DN48405_c0_g1_i7 from sample A10 / Example unspliced isoform:ATTGTTTGATTAACCTGCTGACTGTATTTTAGGGTTTGAGATCTGTTCTATGTACGTAATAAATTTTGTGTTGGTCATATATGTCTGTATAGATTATAGCAGGAGCTAGAATGGAAGGGATTTAATTTTGAGCCGCAAACAACTTCAAGGTTTGCTTATGGAAATCAATGCTCTCTGTCAAATGGTTAAAGATCTGCTCT
GCTTTGCTCTGgtatgtatccatttaacgctctatttttctgtgtaaatttatcaggaatcttgatttaatctgtgagatccctctattttaaatttcattcccaatcaacctttatttgtttcttcagTAGACTTGCCTGAGGGTTGGGTTCGACTTTGTTCTGTTCCTATGGAGGACTGGGAAGAAAGTTCAAAGGAC
TGAATCAGATTTCGGAGGCTTGGGTTTGATTTAAGTTTGAGATCTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAAAATGTTTTTTGAGATCTGTTATTAATAATTTTTAAACTTTTTTTTGCCTCTTCCTATATTCTGGACAAGAGCCAGCAGAATCCAATCTGTTTGTGTTAT
AGTCTGTATCTCAAATCCCAGCGCTCTGTTTGTGTAGGTTTACTTCCATATTGTTATTGTGTTAGTCTGCATACATCCACCTCCACCTATTTTAAGATTGTTACAACATTTCTTTCTTAGTTTGTATATTATATATGCTTTAAGAATTTATATGTCGACCTATGTATTTGCTCTCTGTTTATTTTTTATTTGTTATATAC
GATTCGGTCTCTTACTTCATATTTTTAAATGTTCTCTTACTATTTTATAGCAATGATGAAATGTGTTATCCCTTGCAACAATAAGTAAATAGTTTAAGTAAAAACGCTGGGGACC
Intron 7 GTAGCTTCCT ... GTCATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 65.22 | 16 | 30 | 3 |
| A2 | 78.95 | 4 | 15 | 2 |
| A3 | 61.54 | 10 | 16 | 4 |
| A4 | 84 | 4 | 21 | 19 |
| A5 | 58.33 | 5 | 7 | 2 |
| A6 | 46.21 | 71 | 61 | 15 |
| A7 | 59.6 | 61 | 90 | 30 |
| A8 | 56.02 | 73 | 93 | 36 |
| A9 | 47.67 | 101 | 92 | 22 |
| A10 | 66.16 | 67 | 131 | 19 |
>TRINITY_DN49031_c2_g1_i15 from sample A7 / Example spliced isoformCCACAAGTGTGTATATATACTATTTCTTAACACAACTTCAAATCACTTTCTCCCAAACGTCTCTGTTGTGTTTTCTTGGAAGTGCTTTCATTGTGTGTATATCTGCTTGGGCGCCTCGGTCTAAGTCCTGAGTTTGTCTGTGTGTGGGTTTTAATGTCTGTCATGTGTCTGTATGCGATAGAAGAGGCTGGACTGAAGGG
GAATTGTTTTTGGGAGCAGACAACTTTAAGGGACAGGCGGGCCGCGGAAGGACGCGGTCAGGTTGCTCGAGAGTGTTTTTTTGCTCTTTATATTTGCTTTGCCTTTGTCTTGGCGGGCTTGGCTTGGGTTGGCTTTCCTCTGTCCCGATGGAAAGCTAAGAAGAAAATAAAAACTGAGCATGAGGCTGGATTCGTTTCCC
TTTCCTTTGGAAGGAAGGCATAATCAGATCGGGTAATCCGATTGGTTGTTCAAAACGCTCGTCTTTCCCTGAACATGCTACTGAAACTCCAGGATTTCGATCTCAAATTCTGGATCTGCATTGTTTGATTAACCTGCTGACTCTGTTTTAGGGTTTGAGATCTGTTTTAGTAGGAGCTAGACTGGAAGGGAATTGATTTT
GAGCCGCAAACAACTTCATTAAGGGAAGGCGCAAAAAGACGTGGTCGGGATTTTAGCTTATGGATATTAGTGCCCTCTGTCAAATGGTGTGTATTTATTTAAAGATCTGCTCTGCTTTGCTCTGGTATGTATCCATTTAACGCTCTCTTTTCTTGTGTAAATTTATCAGGAATCTTGATTTAATCTGTGCGATCCCTCTA
TTTTAAATTTCATTCCCAATCATTTCTTTGTTTCTTCATTACACTTTCCTGAGGGTTGGGTTTGACTTTGTTCACTTCCTATGGAGAGATGGGAAGAAAGTACTGAATCAGTCCAACGCGTGTTTGATTTAAGATTTGAGATGTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAA
AATGTTTTTTGAGATCTGTTATTAATAATTTTTAAACTTTTTTTTGCCTCTTCCTATATTCTGGACAAG
>TRINITY_DN49031_c2_g1_i9 from sample A7 / Example unspliced isoform:CCACAAGTGTGTATATATACTATTTCTTAACACAACTTCAAATCACTTTCTCCCAAACGTCTCTGTTGTGTTTTCTTGGAAGTGCTTTCATTGTGTGTATATCTGCTTGGGCGCCTCGGTCTAAGTCCTGAGTTTGTCTGTGTGTGGGTTTTAATGTCTGTCATGTGTCTGTATGCGATAGAAGAGGCTGGACTGAAGGG
GAATTGTTTTTGGGAGCAGACAACTTTAAGGGACAGGCGGGCCGCGGAAGGACGCGGTCAGGTTGCTCGAGAGTGTTTTTTTGCTCTTTATATTTGgtagcttcctttaactgagatatcagatctgcttttccatgccctgtttcagctctctctttctttaattaatttctctgtcatttcagctttgcctttgtctt
ggggaattcatttgaggattcttgatttaatttctgtgtcatttcagCTTTGCCTTTGTCTTGGCGGGCTTGGCTTGGGTTGGCTTTCCTCTGTCCCGATGGAAAGCTAAGAAGAAAATAAAAACTGAGCATGAGGCTGGATTCGTTTCCCTTTCCTTTGGAAGGAAGGCATAATCAGATCGGGTAATCCGATTGGTTGT
TCAAAACGCTCGTCTTTCCCTGAACATGCTACTGAAACTCCAGGATTTCGATCTCAAATTCTGGATCTGCATTGTTTGATTAACCTGCTGACTCTGTTTTAGGGTTTGAGATCTGTTTTAGTAGGAGCTAGACTGGAAGGGAATTGATTTTGAGCCGCAAACAACTTCATTAAGGGAAGGCGCAAAAAGACGTGGTCGGG
ATTTTAGCTTATGGATATTAGTGCCCTCTGTCAAATGGTGTGTATTTATTTAAAGATCTGCTCTGCTTTGCTCTGGTATGTATCCATTTAACGCTCTCTTTTCTTGTGTAAATTTATCAGGAATCTTGATTTAATCTGTGCGATCCCTCTATTTTAAATTTCATTCCCAATCATTTCTTTGTTTCTTCATTACACTTTCC
TGAGGGTTGGGTTTGACTTTGTTCACTTCCTATGGAGAGATGGGAAGAAAGTACTGAATCAGTCCAACGCGTGTTTGATTTAAGATTTGAGATGTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAAAATGTTTTTTGAGATCTGTTATTAATAATTTTTAAACTTTTTTTTGCCT
CTTCCTATATTCTGGACAAG
Intron 8 GTAAGTAATA ... ATCTGTATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50 | 3 | 0 | 3 |
| A2 | 66.67 | 5 | 2 | 10 |
| A3 | 37.5 | 5 | 0 | 3 |
| A4 | 20 | 4 | 2 | 1 |
| A5 | 0 | 1 | 0.7 | 0 |
| A6 | 29.27 | 29 | 12 | 12 |
| A7 | 35.59 | 38 | 9.3 | 21 |
| A8 | 33.65 | 69 | 17.3 | 35 |
| A9 | 26.49 | 55.5 | 12 | 20 |
| A10 | 28.13 | 46 | 9.3 | 18 |
>TRINITY_DN49031_c2_g1_i9 from sample A7 / Example spliced isoformCCACAAGTGTGTATATATACTATTTCTTAACACAACTTCAAATCACTTTCTCCCAAACGTCTCTGTTGTGTTTTCTTGGAAGTGCTTTCATTGTGTGTATATCTGCTTGGGCGCCTCGGTCTAAGTCCTGAGTTTGTCTGTGTGTGGGTTTTAATGTCTGTCATGTGTCTGTATGCGATAGAAGAGGCTGGACTGAAGGG
GAATTGTTTTTGGGAGCAGACAACTTTAAGGGACAGGCGGGCCGCGGAAGGACGCGGTCAGGTTGCTCGAGAGTGTTTTTTTGCTCTTTATATTTGGTAGCTTCCTTTAACTGAGATATCAGATCTGCTTTTCCATGCCCTGTTTCAGCTCTCTCTTTCTTTAATTAATTTCTCTGTCATTTCAGCTTTGCCTTTGTCTT
GGGGAATTCATTTGAGGATTCTTGATTTAATTTCTGTGTCATTTCAGCTTTGCCTTTGTCTTGGCGGGCTTGGCTTGGGTTGGCTTTCCTCTGTCCCGATGGAAAGCTAAGAAGAAAATAAAAACTGAGCATGAGGCTGGATTCGTTTCCCTTTCCTTTGGAAGGAAGGCATAATCAGATCGGGTAATCCGATTGGTTGT
TCAAAACGCTCGTCTTTCCCTGAACATGCTACTGAAACTCCAGGATTTCGATCTCAAATTCTGGATCTGCATTGTTTGATTAACCTGCTGACTCTGTTTTAGGGTTTGAGATCTGTTTTAGTAGGAGCTAGACTGGAAGGGAATTGATTTTGAGCCGCAAACAACTTCATTAAGGGAAGGCGCAAAAAGACGTGGTCGGG
ATTTTAGCTTATGGATATTAGTGCCCTCTGTCAAATGGTGTGTATTTATTTAAAGATCTGCTCTGCTTTGCTCTGGTATGTATCCATTTAACGCTCTCTTTTCTTGTGTAAATTTATCAGGAATCTTGATTTAATCTGTGCGATCCCTCTATTTTAAATTTCATTCCCAATCATTTCTTTGTTTCTTCATTACACTTTCC
TGAGGGTTGGGTTTGACTTTGTTCACTTCCTATGGAGAGATGGGAAGAAAGTACTGAATCAGTCCAACGCGTGTTTGATTTAAGATTTGAGATGTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAAAATGTTTTTTGAGATCTGTTATTAATAATTTTTAAACTTTTTTTTGCCT
CTTCCTATATTCTGGACAAG
>TRINITY_DN49031_c2_g1_i8 from sample A7 / Example unspliced isoform:ATCATATATGCCTGAGATCTGTTTTAGgtaagtaataaattttatgttgatcatatatgcctgagatctgttttaggtaagtaataaattttatgttgatcatatatgcctgagatctgttatgtttgagatctgtatagTAGGAGCTAGACTGGAAGGGAATTGATTTTGAGCCGCAAACAACTTCATTAAGGGAAGGC
GCAAAAAGACGTGGTCGGGATTTTAGCTTATGGATATTAGTGCCCTCTGTCAAATGGTGTGTATTTATTTAAAGATCTGCTCTGCTTTGCTCTGGTATGTATCCATTTAACGCTCTCTTTTCTTGTGTAAATTTATCAGGAATCTTGATTTAATCTGTGCGATCCCTCTATTTTAAATTTCATTCCCAATCATTTCTTTG
TTTCTTCATTACACTTTCCTGAGGGTTGGGTTTGACTTTGTTCACTTCCTATGGAGAGATGGGAAGAAAGTACTGAATCAGTCCAACGCGTGTTTGATTTAAGATTTGAGATGTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAAAATGTTTTTTGAGATCTGTTATTAATAATT
TTTAAACTTTTTTTTGCCTCTTCCTATATTCTGGACAAG
Intron 9 GTGTGTATTT ... AATTTATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 91.43 | 3 | 17 | 47 |
| A2 | 71.15 | 15 | 21 | 53 |
| A3 | 100 | 0 | 11 | 17 |
| A4 | 90.48 | 1 | 7 | 12 |
| A5 | 100 | 0 | 4 | 7 |
| A6 | 83.58 | 22 | 67 | 157 |
| A7 | 81.19 | 41 | 116 | 238 |
| A8 | 77.21 | 58 | 139 | 254 |
| A9 | 80.16 | 37 | 109 | 190 |
| A10 | 84.34 | 22 | 86 | 151 |
>TRINITY_DN49031_c2_g1_i6 from sample A7 / Example spliced isoformATCATATATGCCTGAGATCTGTTTTAGGTAAGTAATAAATTTTATGTTGATCATATATGCCTGAGATCTGTTTTAGGTAAGTAATAAATTTTATGTTGATCATATATGCCTGAGATCTGTTATGTTTGAGATCTGTATAGTAGGAGCTAGACTGGAAGGGAATTGATTTTGAGCCGCAAACAACTTCATTAAGGGAAGGC
GCAAAAAGACGTGGTCGGGATTTTAGCTTATGGATATTAGTGCCCTCTGTCAAATGGAATCTTGATTTAATCTGTGCGATCCCTCTATTTTAAATTTCATTCCCAATCATTTCTTTGTTTCTTCATTACACTTTCCTGAGGGTTGGGTTTGACTTTGTTCACTTCCTATGGAGAGATGGGAAGAAAGTACTGAATCAGTC
CAACGCGTGTTTGATTTAAGATTTGAGATGTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAAAATGTTTTTTGAGATCTGTTATTAATAATTTTTAAACTTTTTTTTGCCTCTTCCTATATTCTGGACAAG
>TRINITY_DN49031_c2_g1_i15 from sample A7 / Example unspliced isoform:CCACAAGTGTGTATATATACTATTTCTTAACACAACTTCAAATCACTTTCTCCCAAACGTCTCTGTTGTGTTTTCTTGGAAGTGCTTTCATTGTGTGTATATCTGCTTGGGCGCCTCGGTCTAAGTCCTGAGTTTGTCTGTGTGTGGGTTTTAATGTCTGTCATGTGTCTGTATGCGATAGAAGAGGCTGGACTGAAGGG
GAATTGTTTTTGGGAGCAGACAACTTTAAGGGACAGGCGGGCCGCGGAAGGACGCGGTCAGGTTGCTCGAGAGTGTTTTTTTGCTCTTTATATTTGCTTTGCCTTTGTCTTGGCGGGCTTGGCTTGGGTTGGCTTTCCTCTGTCCCGATGGAAAGCTAAGAAGAAAATAAAAACTGAGCATGAGGCTGGATTCGTTTCCC
TTTCCTTTGGAAGGAAGGCATAATCAGATCGGGTAATCCGATTGGTTGTTCAAAACGCTCGTCTTTCCCTGAACATGCTACTGAAACTCCAGGATTTCGATCTCAAATTCTGGATCTGCATTGTTTGATTAACCTGCTGACTCTGTTTTAGGGTTTGAGATCTGTTTTAGTAGGAGCTAGACTGGAAGGGAATTGATTTT
GAGCCGCAAACAACTTCATTAAGGGAAGGCGCAAAAAGACGTGGTCGGGATTTTAGCTTATGGATATTAGTGCCCTCTGTCAAATGgtgtgtatttatttaaagatctgctctgctttgctctggtatgtatccatttaacgctctcttttcttgtgtaaatttatcagGAATCTTGATTTAATCTGTGCGATCCCTCTA
TTTTAAATTTCATTCCCAATCATTTCTTTGTTTCTTCATTACACTTTCCTGAGGGTTGGGTTTGACTTTGTTCACTTCCTATGGAGAGATGGGAAGAAAGTACTGAATCAGTCCAACGCGTGTTTGATTTAAGATTTGAGATGTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGACGTCTATTTTATATAA
AATGTTTTTTGAGATCTGTTATTAATAATTTTTAAACTTTTTTTTGCCTCTTCCTATATTCTGGACAAG
Intron 10 GTATATATGT ... GTCTGTATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.6 | 57.5 | 24 | 22 |
| A2 | 25.2 | 49 | 20 | 13 |
| A3 | 18.06 | 59 | 15 | 11 |
| A4 | 29.8 | 53 | 22 | 23 |
| A5 | 19.77 | 34.5 | 7 | 10 |
| A6 | 20.88 | 523 | 189 | 87 |
| A7 | 23.38 | 485 | 181 | 115 |
| A8 | 22.14 | 533 | 175 | 128 |
| A9 | 19.88 | 610.5 | 198 | 105 |
| A10 | 21.26 | 370.5 | 135 | 65 |
>TRINITY_DN121661_c0_g1_i11 from sample A2 / Example spliced isoformCCTCATCTTCCTCAAGCGCTTCCATTATGTGTATATGTCTGCTTGGGCGTCTGGGTATAAGTCCTGAGTTTGTCTGTTTGTGGGCTTTAATGCCTGTCATGTCTCTGCAGTATGTGATAGATAGATGAGGCTGGACTGAAGGGGAATTGCATTTGGGAGCAAACAACTTCAAGGGACGGGCTGAAGGACGCAGTCAGGTT
GCTCAATGGTTTTCTTTGGTCACAAAGATAAATGCTCTTTATATTTACTAGCTTCCTTTAATTTAGACATCAGATCTGCTTTGCCATGGCTTGGTTTAGCTCTCTCTTTCTCTTGGTGAATTCATTTGAGGTTTCTTTATTTGATTTCTGTCATTTCATCTTTGCCTTTGCCTTGGGATTTGGGCTTGGATTTCCTCTTT
TCTGATGGAAAGCCAAGAAGAAAATAATAATTGAGTACGAGGCCGAAGTCATTGCCCAGCTTGCCTTTTCTTGGCTTCTGAAGGAAGCCAAGAAAATAATAATTGAGTACTCTGCTGAACTCCAGATTATAGCAGGAGCTAGAATGGAAGGGATTTAATTTTGAGCCGCAAACAACTTCAAGGTTTGCTTATGGAAATCA
ATGCTCTCTGTCAAATGGTTAAAGATCTGCTCTGCTTTGCTCTGTAGACTTGCCTGAGGGTTGGGTTCGACTTTGTTCTGTTCCTATGGAGGACTGGGAAGAAAGTTCAAAGGACTGAATCAGATTTCGGAGGCTTGGGTTTGATTTAAGTTTGAGATCTATTTTAGATACACACATTTTGTTGTGATATATGGATTTGA
CGTCTATTTTATATAAAATGTTTTTTTGAGATCTGTTATTAATAATTTTTAAACTTTTTTTTGCCTCTTCCTATATTCTGGACAAGAGCCAGCAGAATCCAATCTGTTTGTGTTATAGTCTGTATCTCAAATCCCAGCGCTCTGTTTGTGTAGGTTTACTTCCATATTGTTATTGTGTTAGTCTGCATACATCCACCTCC
ACCTATTTTAAGATTGTTACAACATTTCTTTCTTAGTTTGTATATTATATATGCTTTAAGAATTTATATGTCGACCTATGTATTTGCTCTCTGTTTATTTTTTATTTGTTATATTCGATTCGGTCTCTTACTTCATATTTTTAAATGTTCATTTATTATTTTATAGAATCTGGAATTACAATGATGAAATATGTGTAGTG
TGACCTTATTTTTAGTTATCCCCTCCTCCAGAATATTGCAACAATAAGTAAATAGTTGCATGGGTTTTTCAAAACTTTGATGACATTCGCTCTTCAACTTTAGTATTTTGTTTTGTTTTCGTTTCGTTGGCAGTGCAGTAGATTCAATGACAAAATACCACTTGGTGCGTCTCTATATTTTTGCATTGATAAATCGATCC
CAACTTGTCTTCGTTTTTTTAAATGAAAATTTAGCTATACTTTATACACACAAAGCCACCAGCAATAAATGAAGCATATGCCGAGCATATAAAATGCCACCAGCAATAACCAGAAACAGTCCAAACTGGTCAGAATACATGCCACAGAACCCAGCCCAAATTGTCTTCCTATTCGTATTCTCAGCGTCTTTGTTTTTCTC
ATTAGTTGTATGCCTTCATTTAAACTCCGATCATAGGAAGTTGATATTTAACACGAATTCAATAAGGTTTGTTGAGATTTGTTTGAAGCCTTTTTTTTAACCTTTTTTTAGGTGTTATATATATATATAGATATATATATATATTCAAATTAAACACGTGTATTCATAAATTTTGACATAGAATTGAAGTATTATGTGTT
TTGTCTTATCTTGGTTTTGATTTTATGTGTGTGTTTATATACAAATTACAAAATATATAAAATAAAAAAAACACACATGTATATATAAATCCATTTAATTTAAG
>TRINITY_DN121661_c0_g1_i13 from sample A2 / Example unspliced isoform:CCTCATCTTCCTCAAGCGCTTCCATTATGTGTATATGTCTGCTTGGGCGTCTGGGTATAAGTCCTGAGTTTGTCTGTTTGTGGGCTTTAATGCCTGTCATGTCTCTGCAGTATGTGATAGATAGATGAGGCTGGACTGAAGGGGAATTGCATTTGGGAGCAAACAACTTCAAGGGACGGGCTGAAGGACGCAGTCAGGTT
GCTCAATGGTTTTCTTTGGTCACAAAGATAAATGCTCTTTATATTTACTAGCTTCCTTTAATTTAGACATCAGATCTGCTTTGCCATGGCTTGGTTTAGCTCTCTCTTTCTCTTGGTGAATTCATTTGAGGTTTCTTTATTTGATTTCTGTCATTTCATCTTTGCCTTTGCCTTGGGATTTGGGCTTGGATTTCCTCTTT
TCTGATGGAAAGCCAAGAAGAAAATAATAATTGAGTACGAGGCCGAAGTCATTGCCCAGCTTGCCTTTTCTTGGCTTCTGAAGGAAGCCAAGAAAATAATAATTGAGTACTCTGCTGAACTCCAGgtatatatgtatttcaatctcaaattctgcatctgcattgtttgattaacctgctgactgtattttagggtttga
gatctgttctatgtacgtaataaattttgtgttggtcatatatgtctgtatagATTATAGCAGGAGCTAGAATGGAAGGGATTTAATTTTGAGCCGCAAACAACTTCAAGGTTTGCTTATGCAAATCAATGCACTCTGTCAAATGGTTAAAGATCTGCTCTGCTTTGCTCTGGTATGTATCATTTAACGCTCTATTTTTC
TGTATAAATTTATCAGGAATCTTGATTTAATCTGTGAGATCCCTCTATTTTAAATTTCATTCCCAATCAACCTTTATTTGTTTCTTCAGCTTTGTTTCTTCATAGACTTGTAGCCTTAGGGTTGGGTTTGACTTTGTTTTGTTCCTATGGAGAGCTACTTGCCTGAGGGTTGGGTTAGACTTTGTTCTGTTCCTATGGAG
GACTGGGAAGAAAGTTCAAAGGACTGAATCAGATTTCGGAGGCTTGGGTTTGATTTAAGTTTGGAATCTATTTTAGATACACACATTTTGTTGAGATATATGG