sp|Q06364|PSMD3_DAUCA ----> Probable 26S proteasome non-ATPase regulatory subunit 3

Intron 1 GTGAGTTAAG ... TATTCTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	19.63	219	65	42
A2	20.98	145	34	43
A3	22.92	195	56	60
A4	21.27	174	58	36
A5	27.68	81	23	39
A6	19.74	248	69	53
A7	20.46	486	118	132
A8	19.29	272	64	66
A9	22.83	426	141	111
A10	20	442	122	99

>TRINITY_DN101747_c0_g1_i1 from sample A5 / Example spliced isoform

AAAGGGGTGGTCACAAAGGAGGTGCGTCTGATGATCCGCGCCATTCGTCACATTATGACGCTGAGGAGGAAGATTAAGGCGCCCCACCTGCTAGCCTTTCTGAAGCAACTCCTTCCTCCTGGTTCCGAGGTCGCTTCTCGGCTCTTACCGTATTTTCCCAAGGAAGATGAGAAGGATATGGAAGTTGATAGTCCTTCATC
GACAAGTCAAACTGTTCCATCTAAGCACACCATTCTTCCTGAGTTGGAAATTTTTGCGTACTTGTTAGTATTGATATTCTTGATTGACCAAAAGCAGTACAATGAGGCCAAAAATTGCTCTTCAGCTGCAATTTCTAGATTGAAGCAACTGAACCGAAGAACACTTGATGTTTTGGCTGCTAGATTGTACTTTTATTACT
CATACAGCTATGAGCTGACAGATTCCCTTGTTGAAATCAGAGGTACACTTCTTGCATTACATCGAACTGCGACACTGCGACATGATGAACTGGGCCAGGAAACATTGCTGAATCTCTTGCTTCGAAATTACTTACACTACAACCTTTACGACCAGGCAGAGAAATTACGATCCAAAGCTCCACGGTTTGAAGCCCATTCA
AATCAACAATTTTGTCGGTATTTGTACTACTTGGGTAGAATACGAACAATACAACTAGAGTACACAGATGCAAAAGAGAGTCTATTGCAAGCAGCTCGTAAAGCTCCAGCATCAGCTCGGGGTTTCCGTATTCAGTGCAATAAATGGGCTGCAATTGTTCGTCTGCTTCTTGGTGAAATTCCAGAGAGAACGACTTTTAT
GCAGAATGGCATGAAGAAAGCCTTGAATCCCTACTTTGAGCTTACCAATGCTGTTCGTATAGGTGATTTAGAACTTTTCCGTAATGTGGCTGATAGATATTCAGAGACATTCACTGCAGATAGAACACATAATTTGATTGTACGGTTACGGCACAATGTGATAAGAACTGGACTTCGGAATATCAGTATTTCTTATTCCC
GAATTTCTCTGGTTGATGTTGCTGCCAAATTGAGGCTCAACTCAGCCACTCCAGTGGCAGATGCCCAGAGTATTGTTGCAAAAGCAATCCGTGATGGTGCAATTGATGCAACCATTGACCATGCAAATGGATGGATGCTCTCTAAAGAGACTGGTGACGTCTATTCCACAAATGAGCCTCAACTAGCATTCAATTCTCGA
ATAGCTTTCTGTCTTAACATGCACAATGAAGCTGTGAGGGCTCTACGTTTCCCTCCTAATGCACACAAAAAGGAGAGAGAGAGTGCTGAGAAGCGCAGAGAAAGGCAACAGCAGGAGCAAGAACTTGCAAAGCATATTGCTGAGGAAGATGATGATGAATTTTAGATTAAGGTATTCAAAAACTTCAAATTGCAGAGTTG
TTTTTGTAATATTCCAAGAATTTAAGGATTTATTGGAAGTGCTTTACAGCATAACTTGTGGAAACATGAGTAATGTTTCGACCTACATGTTTCACTAGCCTGTGATAGACAGCAAATTGTTTACTTTTGTTTGACAGCTAAAAGCCTTCATTGTTGTCGGCAGTTAGTTTGGATAGAGAAATTCAATATTTATGCATTTC
CA

>TRINITY_DN101747_c0_g1_i2 from sample A5 / Example unspliced isoform:

AAAGGGGTGGTCACAAAGGAGGTGCGTCTGATGATCCGCGCCATTCGTCACATTATGACGCTGAGGAGGAAGATTAAGGCGCCCCACCTGCTAGCCTTTCTGAAGCAACTCCTTCCTCCTGGTTCCGAGGTCGCTTCTCGGCTCTTACCGTATTTTCCCAAGGAAGATGAGAAGGATATGGAAGTTGATAGTCCTTCATC
GACAAGTCAAACTGTTCCATCTAAGCACACCATTCTTCCTGAGTTGGAAATTTTTGCGTACTTGTTAGTATTGATATTCTTGATTGACCAAAAGCAGTACAATGAGgtgagttaagattttcacgagatagtatattgaactaatttttcaagttgcttttgtaattcatattttatttttgaagtgttggttaatatta
ttttagtttgaactgtctcctcgtagtataatagcatggattattctgcagGCCAAAAATTGCTCTTCAGCTGCAATTTCTAGATTGAAGCAACTGAACCGAAGAACACTTGATGTTTTGGCTGCTAGATTGTACTTTTATTACTCATACAGCTATGAGCTGACAGATTCCCTTGTTGAAATCAGAGGTACACTTCTTGC
ATTACATCGAACTGCGACACTGCGACATGATGAACTGGGCCAGGAAACATTGCTGAATCTCTTGCTTCGAAATTACTTACACTACAACCTTTACGACCAGGCAGAGAAATTACGATCCAAAGCTCCACGGTTTGAAGCCCATTCAAATCAACAATTTTGTCGGTATTTGTACTACTTGGGTAGAATACGAACAATACAAC
TAGAGTACACAGATGCAAAAGAGAGTCTATTGCAAGCAGCTCGTAAAGCTCCAGCATCAGCTCGGGGTTTCCGTATTCAGTGCAATAAATGGGCTGCAATTGTTCGTCTGCTTCTTGGTGAAATTCCAGAGAGAACGACTTTTATGCAGAATGGCATGAAGAAAGCCTTGAATCCCTACTTTGAGCTTACCAATGCTGTT
CGTATAGGTGATTTAGAACTTTTCCGTAATGTGGCTGATAGATATTCAGAGACATTCACTGCAGATAGAACACATAATTTGATTGTACGGTTACGGCACAATGTGATAAGAACTGGACTTCGGAATATCAGTATTTCTTATTCCCGAATTTCTCTGGTTGATGTTGCTGCCAAATTGAGGCTCAACTCAGCCACTCCAGT
GGCAGATGCCCAGAGTATTGTTGCAAAAGCAATCCGTGATGGTGCAATTGATGCAACCATTGACCATGCAAATGGATGGATGCTCTCTAAAGAGACTGGTGACGTCTATTCCACAAATGAGCCTCAACTAGCATTCAATTCTCGAATAGCTTTCTGTCTTAACATGCACAATGAAGCTGTGAGGGCTCTACGTTTCCCTC
CTAATGCACACAAAAAGGAGAGAGAGAGTGCTGAGAAGCGCAGAGAAAGGCAACAGCAGGAGCAAGAACTTGCAAAGCATATTGCTGAGGAAGATGATGATGAATTTTAGATTAAGGTATTCAAAAACTTCAAATTGCAGAGTTGTTTTTGTAATATTCCAAGAATTTAAGGATTTATTGGAAGTGCTTTACAGCATAAC
TTGTGGAAACATGAGTAATGTTTCGACCTACATGTTTCACTAGCCTGTGATAGACAGCAAATTGTTTACTTTTGTTTGACAGCTAAAAGCCTTCATTGTTGTCGGCAGTTAGTTTGGATAGAGAAATTCAATATTTATGCATTTCCA

Intron 2 GTATGGCTGA ... GTTCATGTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	25.38	244	0	83
A2	27.51	166	1	63
A3	25.57	247.5	1	85
A4	26.48	186	2	67
A5	25.81	115	0	40
A6	26.68	371	2	135
A7	23.36	679	0	207
A8	24.85	490	0	162
A9	25.34	607	0	206
A10	24.71	512	0	168

>TRINITY_DN103871_c0_g1_i2 from sample A2 / Example spliced isoform

CGTGTTCTTTACTCTTTTTTCGCCCCTCTAAAAAGCTCCCAAATGCTTTTACTGAAATTAAAGGAAATTTATATGAAATGCCCTTGTATTTTAGCCATTTTCTCATCTGTGTATGTTGTAGGTGAAGCTCGTGTGATGCTCTGCGTCTCCCTCGCGGTGAAGTAACGAATCGTTCAGGTTTAACGAGCAAACCCAGGATG
GCTACTCAAGACGTCGAGATGAAGGACTCAGTAGTTGCGCTCTCCAATTCCTCTACGTCGTCGCCTCCACCGGTGCTCACGCATCTGAAGAATGTGGCGGCGTTGATCGAGAAAGGGGTGGTCACAAAGGAGGTGCGTCTGATGATCCGCGCCATTCGTCACATTATGACGCTGAGGAGGAAGATTAAGGCGCCCCACCT
GCTAGCCTTTCTGAAGCAACTCCTTCCTCCTGGTTCCGAGGTCGCTTCTCGGCTCTTACCGTATTTTCCCAAGGAAGATGAGAAGGATATGGAAGTTGATAGTCCTTCATCGACAAGTCAAACTGTTCCATCTAAGCACACCATTCTTCCTGAGTTGGAAATTTTTGCGTACTTGTTAGTATTGATATTCTTGATTGACC
AAAAGCAGTACAATGAGGCCAAAAATTGCTCTTCAGCTGCAATTTCTAGATTGAAGCAACTGAACCGAAGAACACTTGATGTTTTGGCTGCTAGATTGTACTTTTATTACTCATACAGCTATGAGCTGACAGATTCCCTTGTTGAAATCAGAGGTACACTTCTTGCATTACATCGAACTGCGACACTGCGACATGATGAA
CTGGGCCAGGAAACATTGCTGAATCTCTTGCTTCGAAATTACTTACACTACAACCTTTACGACCAGGCAGAGAAATTACGATCCAAAGCTCCACGGTTTGAAGCCCATTCAAATCAACAATTTTGTCGGTATTTGTACTACTTGGGTAGAATACGAACAATACAACTAGAGTACACAGATGCAAAAGAGAGTCTATTGCA
AGCAGCTCGTAAAGCTCCAGCATCAGCTCGGGGTTTCCGTATTCAGTGCAATAAATGGGCTGCAATTGTTCGTCTGCTTCTTGGTGAAATTCCAGAGAGAACGACTTTTATGCAGAATGGCATGAAGAAAGCCTTGAATCCCTACTTTGAGCTTACCAATGCTGTTCGTATAGGTGATTTAGAACTTTTCCGTAATGTGG
CTGATAGATATTCAGAGACATTCACTGCAGATAGAACACATAATTTGATTGTACGGTTACGGCACAATGTGATAAGAACTGGACTTCGGAATATCAGTATTTCTTATTCCCGAATTTCTCTGGTTGATGTTGCTGCCAAATTGAGGCTCAACTCAGCCACTCCAGTGGCAGATGCCCAGAGTATTGTTGCAAAAGCAATC
CGTGATGGTGCAATTGATGCAACCATTGACCATGCAAATGGATGGATGCTCTCTAAAGAGACTGGTGACGTCTATTCCACAAATGAGCCTCAACTAGCATTCAATTCTCGAATAGCTTTCTGTCTTAACATGCACAATGAAGCTGTGAGGGCTCTACGTTTCCCTCCTAATGCACACAAAAAGGAGAGAGAGAGTGCTGA
GAAGCGCAGAGAAAGGCAACAGCAGGAGCAAGAACTTGCAAAGCATATTGCTGAGGAAGATGATGATGAATTTTAGATTAAGGTATTCAAAAACTTCAAATTGCAGAGTTGTTTTTGTAATATTCCAAGAATTTAAGGATTTATTGGAAGTGCTTTACAGCATAACTTGTGGAAACATGAGTAATGTTTCGACCTACATG
TTTCACTAGCCTGTGATAGACAGCAAATTGTTTACTTTTGTTTGACAGCTAAAAGCCTTCATTGTTGTCGGCAGTTAGTTTGGATAGAGAAATTCAATATTTATGCATTTCCATGTTTTGCTAAACTTATTTATAGATTCAAC

>TRINITY_DN103871_c0_g1_i1 from sample A2 / Example unspliced isoform:

GCGACATGATGAACTGGGCCAGgtatggctgatttgtaatgagtatttatgatttaagttgattcttttcatggtaagtaataaatttggtgctgtactactattcattatactgaagttgattgctttgtggtgggtgttcatgtagGAAACATTGCTGAATCTCTTGCTTCGAAATTACTTACACTACAACCTTTACG
ACCAGGCAGAGAAATTACGATCCAAAGCTCCACGGTTTGAAGCCCATTCAAATCAACAATTTTGTCGGTATTTGTACTACTTGGGTAGAATACGAACAATACAACTAGAGTACACAGATGCAAAAGAGAGTCTATTGCAAGCAGCTCGTAAAGCTCCAGCATCAGCTCGGGGTTTCCGTATTCAGTGCAATAAATGGGCT
GCAATTGTTCGTCTGCTTCTTGGTGAAATTCCAGAGAGAACGACTTTTATGCAGAATGGCATGAAGAAAGCCTTGAATCCCTACTTTGAGCTTACCAATGCTGTTCGTATAGGTGATTTAGAACTTTTCCGTAATGTGGCTGATAGATATTCAGAGACATTCACTGCAGATAGAACACATAATTTGATTGTACGGTTACG
GCACAATGTGATAAGAACTGGACTTCGGAATATCAGTATTTCTTATTCCCGAATTTCTCTGGTTGATGTTGCTGCCAAATTGAGGCTCAACTCAGCCACTCCAGTGGCAGATGCCCAGAGTATTGTTGCAAAAGCAATCCGTGATGGTGCAATTGATGCAACCATTGACCATGCAAATGGATGGATGCTCTCTAAAGAGA
CTGGTGACGTCTATTCCACAAATGAGCCTCAACTAGCATTCAATTCTCGAATAGCTTTCTGTCTTAACATGCACAATGAAGCTGTGAGGGCTCTACGTTTCCCTCCTAATGCACACAAAAAGGAGAGAGAGAGTGCTGAGAAGCGCAGAGAAAGGCAACAGCAGGAGCAAGAACTTGCAAAGCATATTGCTGAGGAAGAT
GATGATGAATTTTAGATTAAGGTATTCAAAAACTTCAAATTGCAGAGTTGTTTTTGTAATATTCCAAGAATTTAAGGATTTATTGGAAGTGCTTTACAGCATAACTTGTGGAAACATGAGTAATGTTTCGACCTACATGTTTCACTAGCCTGTGATAGACAGCAAATTGTTTACTTTTGTTTGACAGCTAAAAGCCTTCA
TTGTTGTCGGCAGTTAGTTTGGATAGAGAAATTCAATATTTATGCATTTCCATGTTTTGCTAAACTTATTTATAGATTCAAC

Intron 3 GTATGCAACG ... GGTCTTTTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	13.38	259	18	40
A2	17.98	219	17.7	48
A3	17.52	277.7	22.3	59
A4	20.54	255.3	17	66
A5	13.31	130.3	9.7	20
A6	18.05	440.3	35	97
A7	14.55	724.3	56.7	123.3
A8	16.71	555	44.7	111.3
A9	16.36	660	51.3	129
A10	14.92	593	47.7	104

>TRINITY_DN24004_c0_g1_i1 from sample A8 / Example spliced isoform

AATGCCCTTGTATTTTAGCCATTTTCTCATCTGTGTATGTTGTAGGTGAAGCTCGTGTGATGCTCTGCGTCTCCCTCGCGGTGAAGTAACGAATCGTTCAGGTTTAACGAGCAAACCCAGGATGGCTACTCAAGACGTCGAGATGAAGGACTCAGTAGTTGCGCTCTCCAATTCCTCTACGTCGTCGCCTCCACCGGTGC
TCACGCATCTGAAGAATGTGGCGGCGTTGATCGAGAAAGGGGTGGTCACAAAGGAGGTGCGTCTGATGATCCGCGCCATTCGTCACATTATGACGCTGAGGAGGAAGATTAAGGCGCCCCACCTGCTAGCCTTTCTGAAGCAACTCCTTCCTCCTGGTTCCGAGGTCGCTTCTCGGCTCTTACCGTATTTTCCCAAGGAA
GATGAGAAGGATATGGAAGTTGATAGTCCTTCATCGACAAGTCAAACTGTTCCATCTAAGCACACCATTCTTCCTGAGTTGGAAATTTTTGCGTACTTGTTAGTATTGATATTCTTGATTGACCAAAAGCAGTACAATGAGGCCAAAAATTGCTCTTCAGCTGCAATTTCTAGATTGAAGCAACTGAACCGAAGAACACT
TGATGTTTTGGCTGCTAGATTGTACTTTTATTACTCATACAGCTATGAGCTGACAGATTCCCTTGTTGAAATCAGAGGTACACTTCTTGCATTACATCGAACTGCGACACTGCGACATGATGAACTGGGCCAGGAAACATTGCTGAATCTCTTGCTTCGAAATTACTTACACTACAACCTTTACGACCAGGCAGAGAAAT
TACGATCCAAAGCTCCACGGTTTGAAGCCCATTCAAATCAACAATTTTGTCGGTATTTGTACTACTTGGGTAGAATACGAACAATACAACTAGAGTACACAGATGCAAAAGAGAGTCTATTGCAAGCAGCTCGTAAAGCTCCAGCATCAGCTCGGGGTTTCCGTATTCAGTGCAATAAATGGGCTGCAATTGTTCGTCTG
CTTCTTGGTGAAATTCCAGAGAGAACGACTTTTATGCAGAATGGCATGAAGAAAGCCTTGAATCCCTACTTTGAGCTTACCAATGCTGTTCGTATAGGTGATTTAGAACTTTTCCGTAATGTGGCTGATAGATATTCAGAGACATTCACTGCAGATAGAACACATAATTTGATTGTACGGTTACGGCACAATGTGATAAG
AACTGGACTTCGGAATATCAGTATTTCTTATTCCCGAATTTCTCTGGTTGATGTTGCTGCCAAATTGAGGCTCAACTCAGCCACTCCAGTGGCAGATGCCCAGAGTATTGTTGCAAAAGCAATCCGTGATGGTGCAATTGATGCAACCATTGACCATGCAAATGGATGGATGCTCTCTAAAGAGACTGGTGACGTCTATT
CCACAAATGAGCCTCAACTAGCATTCAATTCTCGAATAGCTTTCTGTCTTAACATGCACAATGAAGCTGTGAGGGCTCTACGTTTCCCTCCTAATGCACACAAAAAGGAGAGAGAGAGTGCTGAGAAGCGCAGAGAAAGGCAACAGCAGGAGCAAGAACTTGCAAAGCATATTGCTGAGGAAGATGATGATGAATTTTAG
ATTAAGGTATTCAAAAACTTCAAATTGCAGAGTTGTTTTTGTAATATTCCAAGAATTTAAGGATTTATTGGAAGTGCTTTACAGCATAACTTGTGGAAACATGAGTAATGTTTCGACCTACATGTTTCACTAGCCTGTGATAGACAGCAAATTGTTTACTTTTGTTTGACAGCTAAAAGCCTTCATTGTTGTCGGCAGTT
AGTTTGGATAGAGAAATTCAATATTTATGCATTTCCATGTTTTGCTAAACTTATTTATAGATTCAACATTGTTTGTTTTATTATGTTTCTCTATTCAAACCTTCTGATGAGTTTGGTAGTGTGGTTTTTCCCTGGCCAAGCACGTTCGGACTTGTTTTTCTACAGATAAATATTAGTTTTAGTAGATAGTGTTG

>TRINITY_DN24004_c0_g1_i2 from sample A8 / Example unspliced isoform:

AATGCCCTTGTATTTTAGCCATTTTCTCATCTGTGTATGTTGTAGGTGAAGCTCGTGTGATGCTCTGCGTCTCCCTCGCGGTGAAGTAACGAATCGTTCAGGTTTAACGAGCAAACCCAGGATGGCTACTCAAGACGTCGAGATGAAGGACTCAGTAGTTGCGCTCTCCAATTCCTCTACGTCGTCGCCTCCACCGGTGC
TCACGCATCTGAAGAATGTGGCGGCGTTGATCGAGAAAGGGGTGGTCACAAAGGAGGTGCGTCTGATGATCCGCGCCATTCGTCACATTATGACGCTGAGGAGGAAGATTAAGGCGCCCCACCTGCTAGCCTTTCTGAAGCAACTCCTTCCTCCTGGTTCCGAGGTCGCTTCTCGGCTCTTACCGTATTTTCCCAAGGAA
GATGAGAAGGATATGGAAGTTGATAGTCCTTCATCGACAAGTCAAACTGTTCCATCTAAGCACACCATTCTTCCTGAGTTGGAAATTTTTGCGTACTTGTTAGTATTGATATTCTTGATTGACCAAAAGCAGTACAATGAGGCCAAAAATTGCTCTTCAGCTGCAATTTCTAGATTGAAGCAACTGAACCGAAGAACACT
TGATGTTTTGGCTGCTAGATTGTACTTTTATTACTCATACAGCTATGAGCTGACAGATTCCCTTGTTGAAATCAGAGGTACACTTCTTGCATTACATCGAACTGCGACACTGCGACATGATGAACTGGGCCAGGAAACATTGCTGAATCTCTTGCTTCGAAATTACTTACACTACAACCTTTACGACCAGGCAGAGAAAT
TACGATCCAAAGCTCCACGGTTTGAAGCCCATTCAAATCAACAAgtatgcaacgactttgtataattttcatttgtacatattagatcagtggagatattcttctaacttgtatatttggtcttttagTTTTGTCGGTATTTGTACTACTTGGGTAGAATACGAACAATACAACTAGAGTACACAGATGCAAAAGAGAGT
CTATTGCAAGCAGCTCGTAAAGCTCCAGCATCAGCTCGGGGTTTCCGTATTCAGTGCAATAAATGGGCTGCAATTGTTCGTCTGCTTCTTGGTGAAATTCCAGAGAGAACGACTTTTATGCAGAATGGCATGAAGAAAGCCTTGAATCCCTACTTTGAGCTTACCAATGCTGTTCGTATAGGTGATTTAGAACTTTTCCG
TAATGTGGCTGATAGATATTCAGAGACATTCACTGCAGATAGAACACATAATTTGATTGTACGGTTACGGCACAATGTGATAAGAACTGGACTTCGGAATATCAGTATTTCTTATTCCCGAATTTCTCTGGTTGATGTTGCTGCCAAATTGAGGCTCAACTCAGCCACTCCAGTGGCAGATGCCCAGAGTATTGTTGCAA
AAGCAATCCGTGATGGTGCAATTGATGCAACCATTGACCATGCAAATGGATGGATGCTCTCTAAAGAGACTGGTGACGTCTATTCCACAAATGAGCCTCAACTAGCATTCAATTCTCGAATAGCTTTCTGTCTTAACATGCACAATGAAGCTGTGAGGGCTCTACGTTTCCCTCCTAATGCACACAAAAAGGAGAGAGAG
AGTGCTGAGAAGCGCAGAGAAAGGCAACAGCAGGAGCAAGAACTTGCAAAGCATATTGCTGAGGAAGATGATGATGAATTTTAGATTAAGGTATTCAAAAACTTCAAATTGCAGAGTTGTTTTTGTAATATTCCAAGAATTTAAGGATTTATTGGAAGTGCTTTACAGCATAACTTGTGGAAACATGAGTAATGTTTCGA
CCTACATGTTTCACTAGCCTGTGATAGACAGCAAATTGTTTACTTTTGTTTGACAGCTAAAAGCCTTCATTGTTGTCGGCAGTTAGTTTGGATAGAGAAATTCAATATTTATGCATTTCCATGTTTTGCTAAACTTATTTATAGATTCAACATTGTTTGTTTTATTATGTTTCTCTATTCAAACCTTCTGATGAGTTTGG
TAGTGTGGTTTTTCCCTGGCCAAGCACGTTCGGACTTGTTTTTCTACAGATAAATATTAGTTTTAGTAGATAGTGTTG

Intron 4 GTAGGTAATA ... GTGGTGTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	24.91	199	2	66
A2	19.34	146	0	35
A3	21.22	219	0	59
A4	23.4	144	0	44
A5	20.47	101	1	26
A6	20.17	289	0	73
A7	22.55	553	0	161
A8	22.85	368	0	109
A9	23.83	473	0	148
A10	21.15	466	0	125

>TRINITY_DN111108_c0_g1_i1 from sample A1 / Example spliced isoform

TCTCATCTGTGTATGTTGTAGGTGAAGCTCGTGTGATGCTCTGCGTCTCCCTCGCGGTGAAGTAACGAATCGTTCAGGTTTAACGAGCAAACCCAGGATGGCTACTCAAGACGTCGAGATGAAGGACTCAGTAGTTGCGCTCTCCAATTCCTCTACGTCGTCGCCTCCACCGGTGCTCACGCATCTGAAGAATGTGGCGG
CGTTGATCGAGAAAGGGGTGGTCACAAAGGAGGTGCGTCTGATGATCCGCGCCATTCGTCACATTATGACGCTGAGGAGGAAGATTAAGGCGCCCCACCTGCTAGCCTTTCTGAAGCAACTCCTTCCTCCTGGTTCCGAGGTCGCTTCTCGGCTCTTACCGTATTTTCCCAAGGAAGATGAGAAGGATATGGAAGTTGAT
AGTCCTTCATCGACAAGTCAAACTGTTCCATCTAAGCACACCATTCTTCCTGAGTTGGAAATTTTTGCGTACTTGTTAGTATTGATATTCTTGATTGACCAAAAGCAGTACAATGAGGCCAAAAATTGCTCTTCAGCTGCAATTTCTAGATTGAAGCAACTGAACCGAAGAACACTTGATGTTTTGGCTGCTAGATTGTA
CTTTTATTACTCATACAGCTATGAGCTGACAGATTCCCTTGTTGAAATCAGAGGTACACTTCTTGCATTACATCGAACTGCGACACTGCGACATGATGAACTGGGCCAGGAAACATTGCTGAATCTCTTGCTTCGAAATTACTTACACTACAACCTTTACGACCAGGCAGAGAAATTACGATCCAAAGCTCCACGGTTTG
AAGCCCATTCAAATCAACAATTTTGTCGGTATTTGTACTACTTGGGTAGAATACGAACAATACAACTAGAGTACACAGATGCAAAAGAGAGTCTATTGCAAGCAGCTCGTAAAGCTCCAGCATCAGCTCGGGGTTTCCGTATTCAGTGCAATAAATGGGCTGCAATTGTTCGTCTGCTTCTTGGTGAAATTCCAGAGAGA
ACGACTTTTATGCAGAATGGCATGAAGAAAGCCTTGAATCCCTACTTTGAGCTTACCAATGCTGTTCGTATAGGTGATTTAGAACTTTTCCGTAATGTGGCTGATAGATATTCAGAGACATTCACTGCAGATAGAACACATAATTTGATTGTACGGTTACGGCACAATGTGATAAGAACTGGACTTCGGAATATCAGTAT
TTCTTATTCCCGAATTTCTCTGGTTGATGTTGCTGCCAAATTGAGGCTCAACTCAGCCACTCCAGTGGCAGATGCCCAGAGTATTGTTGCAAAAGCAATCCGTGATGGTGCAATTGATGCAACCATTGACCATGCAAATGGATGGATGCTCTCTAAAGAGACTGGTGACGTCTATTCCACAAATGAGCCTCAACTAGCAT
TCAATTCTCGAATAGCTTTCTGTCTTAACATGCACAATGAAGCTGTGAGGGCTCTACGTTTCCCTCCTAATGCACACAAAAAGGAGAGAGAGAGTGCTGAGAAGCGCAGAGAAAGGCAACAGCAGGAGCAAGAACTTGCAAAGCATATTGCTGAGGAAGATGATGATGAATTTTAGATTAAGGTATTCAAAAACTTCAAA
TTGCAGAGTTGTTTTTGTAATATTCCAAGAATTTAAGGATTTATTGGAAGTGCTTTACAGCATAACTTGTGGAAACATGAGTAATGTTTCGACCTACATGTTTCACTAGCCTGTGATAGACAGCAAATTGTTTACTTTTGTTTGACAGCTAAAAGCCTTCATTGTTGTCGGCAGTTAGTTTGGATAGAGAAATTCAATAT
TTATGCATTTCCATGTTTTGCTA

>TRINITY_DN111108_c0_g1_i3 from sample A1 / Example unspliced isoform:

GATTCCCTTGTTGAAATCAGAGGgtaggtaataccattggaaatgttcaatgccctttgtgttagctctttgtaataatgaaaaactgattcacacttaaatgccatcttgtggtgtcagTACACTTCTTGCATTACATCGAACTGCGACACTGCGACATGATGAACTGGGCCAGGAAACATTGCTGAATCTCTTGCTTC
GAAATTACTTACACTACAACCTTTACGACCAGGCAGAGAAATTACGATCCAAAGCTCCACGGTTTGAAGCCCATTCAAATCAACAATTTTGTCGGTATTTGTACTACTTGGGTAGAATACGAACAATACAACTAGAGTACACAGATGCAAAAGAGAGTCTATTGCAAGCAGCTCGTAAAGCTCCAGCATCAGCTCGGGGT
TTCCGTATTCAGTGCAATAAATGGGCTGCAATTGTTCGTCTGCTTCTTGGTGAAATTCCAGAGAGAACGACTTTTATGCAGAATGGCATGAAGAAAGCCTTGAATCCCTACTTTGAGCTTACCAATGCTGTTCGTATAGGTGATTTAGAACTTTTCCGTAATGTGGCTGATAGATATTCAGAGACATTCACTGCAGATAG
AACACATAATTTGATTGTACGGTTACGGCACAATGTGATAAGAACTGGACTTCGGAATATCAGTATTTCTTATTCCCGAATTTCTCTGGTTGATGTTGCTGCCAAATTGAGGCTCAACTCAGCCACTCCAGTGGCAGATGCCCAGAGTATTGTTGCAAAAGCAATCCGTGATGGTGCAATTGATGCAACCATTGACCATG
CAAATGGATGGATGCTCTCTAAAGAGACTGGTGACGTCTATTCCACAAATGAGCCTCAACTAGCATTCAATTCTCGAATAGCTTTCTGTCTTAACATGCACAATGAAGCTGTGAGGGCTCTACGTTTCCCTCCTAATGCACACAAAAAGGAGAGAGAGAGTGCTGAGAAGCGCAGAGAAAGGCAACAGCAGGAGCAAGAA
CTTGCAAAGCATATTGCTGAGGAAGATGATGATGAATTTTAGATTAAGGTATTCAAAAACTTCAAATTGCAGAGTTGTTTTTGTAATATTCCAAGAATTTAAGGATTTATTGGAAGTGCTTTACAGCATAACTTGTGGAAACATGAGTAATGTTTCGACCTACATGTTTCACTAGCCTGTGATAGACAGCAAATTGTTTA
CTTTTGTTTGACAGCTAAAAGCCTTCATTGTTGTCGGCAGTTAGTTTGGATAGAGAAATTCAATATTTATGCATTTCCATGTTTTGCTA