sp|P0DO54|TIP12_MUSAC ----> Aquaporin TIP1-2
Intron 1 GTTAGTATGC ... GCCGATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.48 | 21 | 33 | 40 |
| A2 | 64.1 | 14 | 23 | 27 |
| A3 | 66.07 | 19 | 35 | 39 |
| A4 | 72.97 | 10 | 28 | 26 |
| A5 | 47.62 | 22 | 12 | 28 |
| A6 | 69.09 | 34 | 14 | 138 |
| A7 | 58.12 | 58 | 53 | 108 |
| A8 | 55.69 | 37 | 23 | 70 |
| A9 | 57.64 | 97 | 59 | 205 |
| A10 | 56.84 | 93 | 55 | 190 |
>TRINITY_DN45989_c0_g1_i7 from sample A8 / Example spliced isoformTGGTGCTACTGAATAAAAAATTGCGTTGAATTTCAAGATAGTGGGATAGCGGATGATGCAAGCCTCGTTTTCTCCTCCCCAAGGGCCGGCGGCGCACTGAGTTCAGCGTATCCTAGTTGCAGGATTTGTCATCAGAATTTGCAGTTAATATATTTAATAAACTGCTGGTACATGGTCAGCCCAGTCGCGTTCACATGTCC
TTTGGATATATTGGACGCAACTGCCACAGCTACGAAGAGCACTATCCCGTGCGCTAGGGCCTCTGCCACCAAGCCTGCTGGCATCACGAAGCGTCGTTTGTCAGCTTGGCTGCCCATTCAAGAAACAGACAGAAATCAGTCATTCAACGTGCCATGAATCGATGGAAAGGATGAGAGCCTTTGGCCCAATGTTGCTGGAT
CTGCCGCACGCCATCATCATACGGATAGCCGAGCATCTCCCATTGACGGATCTGCCCAATTTCATAGCTTCCTGCAAGACCCTCGCCGCCATGGCCGGCGACTTCTACGAGGAGCGCAAGTGCCTCGACATGTCGTGCTTTGAACCCGCGACGCAGAGCCCGCGGGTTTGCGAGCAGCTGATACGGCGCTTCTCGGCCGT
CCGGCTCCGCAGTTGCATCTTCCGTTTCGACGTCGGGCGGCACCACAGGTATGATCAAAGAACGCTCGACGCCATCCTCGCCCGCTTTCTTGACAACTTAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGTATGATCGATATCCTGGCGCACTGTTTCTTTCTCGACAGGTTTCTCTCCT
CTCAGCCGCAGCTGAGGGAGCTGGACGTAGACCTGGAGCTGAGCCTTTTCAAGATCCCCAATAGCAGGGGCCAGCGTCTCGACTGGCAGATGCTAAGCCCCTTTGTTACCACTGATGCCGTGCAGAGGAATTGCCCGCAGATCGAATCCTACTCCGCTTTAACCTCCTCTTTCCATGCCTCGCAGTTGAACCTCCTGCAT
ACCCAAGTTCGATTCCTGGAGCGCTGCCCCAGCCTGAGATTCGTGGGGTTCGTGTTCGTCCTCGGGATGGAGGAGCTCGCCACATATGAGCGACTGTGCCGCCCGCTGGCGCTCGAGCGCGCCGTGTTTTATCTTCCTGGCTGGCCTGTCTCGTCCGATTTCAATGCCACCAGGGTCCGCAATCTCGGCGCCAGGCTTGC
GAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGATCGAATCGCTCTACCTCCGCTGTGAGTTCAATCCCAGTTACCCTCTCTACGACATCGATGAGGGTTCTGGTTTCTTTTTCGGCGATGTCTTTCGCTTGCTTGGGGCGGCCTCTGTTT
CCAGGGTTACGCTCTAGCGGGTGCCTGAAGATGAGTTTGAGAGTCTTTTCAGGACTGGCACGGGTTCCTTGTTATTGCCTAAGGGGATTCGGGAACTCAGGGTTAAATTGCATTGGTGCAGCCCTAATTTGGATGAGAGGAGAGAAAGATTGCTTCATGGGTTCTTGAAGAATTCTCCCCATCTGGATACCTATTGCATT
GCTGGGGTGCCACTTATGCCAGTCACACAGGAACACCAACCAAACCCTGTGTTCTACAAGGCCAAAAATTGGAAACCCATTTGTCCTACTTTGAGCTGCTCGTTCATATTTAGTGGGAGTAAGAGAAAAGCCTTCCTTTGAGCTATTCGTTCATATTTATAGGAAAAAAGTAAAAAATTCTTGAGCTGGATAAAATATGA
GCCCTGAGGCGTAAAATTGACAACAGAAATTGCTTGGATGCTATCCTCAATAGACCCTATGAGACTATTAGATTGATTGTTTTTTCCACAGTAGCGTTTGAGTAGAGCATTGCAGCTCAGCTTGTGTACATTACATTTAGATTACTGATTACGTGTCTGGTGGAAACTCCATGATTGACAACAGAAATTGCTTGGATGCT
ATCCTCAATAGACCCTATGAGACTATTGCTTATGGGGTTGAGAAACAGATGAACTGTGACTAAATAAATTCACCTGTTGCTGCTCTGGTCAACATAAACCAGATTAGATTGATTGTTTTTTCCATAGTAGCGCTTGAGTAGAGCATTGTAGCTCAGCTTGTGTACTTTACATTTAGATTACTAATTTATTTGTCTGGTGT
AAACTCCATCAGTAGCGCTTGAGGAGAGCATTGCAGCTCTACATTTAGATTACTGATTATTTGTCTGGTGGAAACTCCAAGATTGTAATAAACATAAAATGTATTCTGTGAAACCTTAATGTGTTTATTCTAAATTAGTTTATTATTTCATTGTATGTAAACTGGCT
>TRINITY_DN45989_c0_g1_i12 from sample A8 / Example unspliced isoform:TGGTGCTACTGAATAAAAAATTGCGTTGAATTTCAAGATAGTGGGATAGCGGATGATGCAAGCCTCGTTTTCTCCTCCCCAAGGGCCGGCGGCGCACTGAGTTCAGCGTATCCTAGTTGCAGGATTTGTCATCAGAATTTGCAGTTAATATATTTAATAAACTGCTGGTACATGGTCAGCCCAGTCGCGTTCACATGTCC
TTTGGATATATTGGACGCAACTGCCACAGCTACGAAGAGCACTATCCCGTGCGCTAGGGCCTCTGCCACCAAGCCTGCTGGCATCACGAAGCGTCGTTTGTCAGCTTGGCTGCCCATTCAAGAAACAGACAGAAATCAGTCATTCAgttagtatgccattattctagctctacaggttattcaaaattcctccaacggct
atctgctcgcgacaatagaattagcctgtataataatagccttctgcctctgcctctcttgcatatacagcatgctctttgttcagatttcattctacaatttaatttgacacgatttcttgctgagatttcgttcttgaatttattttcttttgccgatgcagACGTGCCATGAATCGATGGAAAGGATGAGAGCCTTT
GGCCCAATGTTGCTGGATCTGCCGCACGCCATCATCATACGGATAGCCGAGCATCTCCCATTGACGGATCTGCCCAATTTCATAGCTTCCTGCAAGACCCTCGCCGCCATGGCCGGCGACTTCTACGAGGAGCGCAAGTGCCTCGACATGTCGTGCTTTGAACCCGCGACGCAGAGCCCGCGGGTTTGCGAGCAGCTGAT
ACGGCGCTTCTCGGCCGTCCGGCTCCGCAGTTGCATCTTCCGTTTCGACGTCGGGCGGCACCACAGGTATGATCAAAGAACGCTCGACGCCATCCTCGCCCGCTTTCTTGACAACTTAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGTATGATCGATATCCTGGCGCACTGTTTCTTTC
TCGACAGGTTTCTCTCCTCTCAGCCGCAGCTGAGGGAGCTGGACGTAGACCTGGAGCTGAGCCTTTTCAAGATCCCCAATAGCAGGGGCCAGCGTCTCGACTGGCAGATGCTAAGCCCCTTTGTTACCACTGATGCCGTGCAGAGGAATTGCCCGCAGATCGAATCCTACTCCGCTTTAACCTCCTCTTTCCATGCCTCG
CAGTTGAACCTCCTGCATACCCAAGTTCGATTCCTGGAGCGCTGCCCCAGCCTGAGATTCGTGGGGTTCGTGTTCGTCCTCGGGATGGAGGAGCTCGCCACATATGAGCGACTGTGCCGCCCGCTGGCGCTCGAGCGCGCCGTGTTTTATCTTCCTGGCTGGCCTGTCTCGTCCGATTTCAATGCCACCAGGGTCCGCAA
TCTCGGCGCCAGGCTTGCGAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGATCGAATCGCTCTACCTCCGCTGTGAGTTCAATCCCAGTTACCCTCTCTACGACATCGATGAGGGTTCTGGTTTCTTTTTCGGCGATGTCTTTCGCTTGC
TTGGGGCGGCCTCTGTTTCCAGGGTTACGCTCTAGCGGGTGCCTGAAGATGAGTTTGAGAGTCTTTTCAGGACTGGCACGGGTTCCTTGTTATTGCCTAAGGGGATTCGGGAACTCAGGGTTAAATTGCATTGGTGCAGCCCTAATTTGGATGAGAGGAGAGAAAGATTGCTTCATGGGTTCTTGAAGAATTCTCCCCAT
CTGGATACCTATTGCATTGCTGGGGTGCCACTTATGCCAGTCACACAGGAACACCAACCAAACCCTGTGTTCTACAAGGCCAAAAATTGGAAACCCATTTGTCCTACTTTGAGCTGCTCGTTCATATTTAGTGGGAGTAAGAGAAAAGCCTTCCTTTGAGCTATTCGTTCATATTTATAGGAAAAAAGTAAAAAATTCTT
GAGCTGGATAAAATATGAGCCCTGAGGCGTAAAATTGACAACAGAAATTGCTTGGATGCTATCCTCAATAGACCCTATGAGACTATTAGATTGATTGTTTTTTCCACAGTAGCGTTTGAGTAGAGCATTGCAGCTCAGCTTGTGTACATTACATTTAGATTACTGATTACGTGTCTGGTGGAAACTCCATGATTGACAAC
AGAAATTGCTTGGATGCTATCCTCAATAGACCCTATGAGACTATTGCTTATGGGGTTGAGAAACAGATGAACTGTGACTAAATAAATTCACCTGTTGCTGCTCTGGTCAACATAAACCAGATTAGATTGATTGTTTTTTCCATAGTAGCGCTTGAGTAGAGCATTGTAGCTCAGCTTGTGTACTTTACATTTAGATTACT
AATTTATTTGTCTGGTGTAAACTCCATCAGTAGCGCTTGAGGAGAGCATTGCAGCTCTACATTTAGATTACTGATTATTTGTCTGGTGGAAACTCCAAGATTGTAATAAACATAAAATGTATTCTGTGAAACCTTAATGTGTTTATTCTAAATTAGTTTATTATTTCATTGTATGTAAACTGGCT
Intron 2 GTAACACCAC ... GCCGATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 49.8 | 12 | 3.7 | 15.3 |
| A2 | 66.47 | 7.7 | 4 | 10.7 |
| A3 | 68.18 | 7 | 2.7 | 15.3 |
| A4 | 33.33 | 5 | 4 | 8.7 |
| A5 | 33.33 | 9.3 | 0 | 7.3 |
| A6 | 55.44 | 27.7 | 8 | 52.3 |
| A7 | 47.11 | 38 | 8 | 39.7 |
| A8 | 37.16 | 22.3 | 10 | 26.7 |
| A9 | 53.84 | 54.7 | 17 | 81.3 |
| A10 | 54.79 | 43.3 | 24.7 | 78.7 |
>TRINITY_DN44715_c4_g1_i13 from sample A6 / Example spliced isoformCTAGTTGCAGGATTCGTCATCAAAATTTGCAGTTAATATATTTAATAAACTGCTGGTACATGGTCAGCCCAGTCGGGTTCAGATGTCCTTTGGATATATTGGACGCAACTGCCACAGCTACGAAGAGCACTATCCCGTGCGCTAGGGCACTCTGCCACCAGGCCCGCTGGCATCGCGAAGGGTCGTTTGTCAGCTTGGTT
GCGCATTCAAGAAACGGACAGAAATCAGTCATTCAGTTAGTATGCCATTATTCTAGCTCTACAGGTTATTCGAAATTCCTCCAACGACTATCTGCTCGCGACGATAGAATTAACCTGTATAATATCCTGCTGCCTCTGCCTCTGCCTCTGCCTCTCTTCCATATATATACACCAACGCGCCGTGAATCGATGGAAAGGCC
GAGAGCCTTTGGCCCAATATTGCTGGATCTGCCTCACGCCATCATCATTCGTATAGCCGAGCATCTCCCATTGACGGATCTG
>TRINITY_DN44715_c4_g1_i3 from sample A6 / Example unspliced isoform:GTTATTCGAAATTCCTCCAACGACTATCTGCTCGCGACGATAGAATTAACCTGTATAATATCCTGCTGCCTCTGCCTCTGCCTCTGCCTCTCTTCCATATATATACACCAgtaacaccacgctctttgttcagatttcattctgcaatttattttgacacgagttcttgcacagatttcattcttgaatttattttcttt
tgccgatgcagACGCGCCGTGAATCGATGGAAAGGCCGAGAGCCTTTGGCCCAATATTGCTGGATCTGCCTCACGCCATCATCATTCGTATAGCCGAGCATCTCCCATTGACGGATCTGCCCAATTTCATAGCTTCCTGCAAGACCCTCGCCGCCATGGCCGGCGACTTCTACGAGGAGCGCAAGTGCCTCGACATGTCG
TGCTTTGAACCCGCGACGCAGAGCCCGCGGGTTTGCGAGCAGCTGATACGGCGCTTCTCGGCCGTCCGGCTCCGCAGTTGCATCTTCCGTTTCGACGTCGGGCGGCACCACAGGTATGATCAAAGAACGCTCGACGCCATCCTCGCCCGCTTTCTTGACAACTTAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCT
CAGCGGGAGCCCGCGTATGATCGATATCCTGGCGCACTGTTTCTTTCTCGACAGGTTTCTCTCCTCTCAGCCGCAGCTGAGGGAGCTGGACGTAGACCTGGAGCTGAGCCTTTTCAAGATCCCCAATAGCAGGGGCCAGCGTCTCGACTGGCAGATGCTAAGCCCCTTTGTTACCACTGATGCCGTGCAGAGGAATTGCC
CGCAGATCGAATCCTACTCCGCTTTAACCTCCTCTTTCCATGCCTCGCAGTTGAACCTCCTGCATACCCAAGTTCGATTCCTGGAGCGCTGCCCCAGCCTGAGATTCGTGGGGTTCGTGTTCGTCCTCGGGACGGAGGAGCTCGCCACATATGAGCGACTGTGCCGCCCGCTGGCGCTCGAGCGCGCCGTGTTTTATCTT
CCTGGCTGGCCTGTCTCGTCCGATTTCAATGCCACCAGGGTCCGCAATCTCGGCGCCAGGCTTGCGAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGATCGAATCGCTCTACCTCCGCTGTGAGTTCAATCCCAGTTACCCTCTCTACGA
CATCGATGAGGGTTCTGGTTTCTTTTTCGGCGATGTCTTTCACTTGCTTGGGGCGGCCTCTGTTTCTAGGGTTACGCTCTGGGGGGTGCCTGAAGATGAGTTTGAGAGTCTTTTCGGGACCGGCACGGGTTCCTTGTTATTGCCTAAGGGGATTCGGGAACTCAGGGTTCAGCTGCATTGGAGCAGCCCTAATTTGGATG
AGAGGAGAGAAAGATTGCTTCATGGGTTCTTGAAGAATTCTCCCCATCTGGATACCTATTGCATTGCTGGGGTGCCACCTGTGCCAGTCACACAGGAACACCAGCCAAACCCTGTGTTCTACAAGGCCAAAAATTGGAATCCCATTTGTCCTACTTTGAGTTGCTCGTTCATATTTAGTGGGAGTAAGAGAAAAGCCTTC
CTTTGAGCTGTTCGTTCATATTTACAGGAAAAAAGTAAAAAATTCTTGAGCTGGATAAAATATGTTTGAGCCCTGAGGCGTAAAATTGACAACAGAAATTGCTTGGATGCTATCCTCAATAGACCCTAAACCCTGTGAGACTATTAGATTGATTGTTTTTTCCACAGTAGCGTTTGAGTAGAGCATTGCAGCTCAGCTTG
TGTACATTACATTTAGATTACTGATTACGTGTCTGGTGGAAACTCCATGATTGACAACAGAAATTGCTTGGATGCTATCCTCAATAGACCCTGTGAAACTATTGCTTATGGGGTTGAGAAACAGATGAACTGTGACTAAATAAATTCACCTGTTGCTGCTCTGGTCAACATAAACCAGATTAGATTGATTGTTTTTTCCA
CAGTAGCGCTTGAGGAGAGCATTGCAGCTCTACATTTAGATTACTGATTATTTGTCTGGTGGAAACTCCAAGATTGTAATAAACATAAAATGTATTCTGTGAAACCTTAATGTGTTTATTCTAAATTAGTTTATTATTTCATTGTGTGTAAACTGGTTGTGATTTTATATTTCCAGTTTATGTAAATTGGTTG
Intron 3 GTTAGTATGC ... AGCTCTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 59.88 | 21.3 | 34 | 29.7 |
| A2 | 52.27 | 14 | 11 | 19.7 |
| A3 | 54.75 | 19 | 22 | 24 |
| A4 | 64.44 | 9.7 | 18 | 17 |
| A5 | 45.09 | 22.3 | 11 | 25.7 |
| A6 | 49.08 | 31 | 16 | 43.7 |
| A7 | 50.05 | 56.7 | 50 | 63.7 |
| A8 | 50.16 | 35.3 | 30 | 41 |
| A9 | 41.99 | 92.7 | 52 | 82.3 |
| A10 | 49.52 | 88.7 | 63 | 111 |
>TRINITY_DN44715_c4_g1_i1 from sample A6 / Example spliced isoformCTAGTTGCAGGATTCGTCATCAAAATTTGCAGTTAATATATTTAATAAACTGCTGGTACATGGTCAGCCCAGTCGGGTTCAGATGTCCTTTGGATATATTGGACGCAACTGCCACAGCTACGAAGAGCACTATCCCGTGCGCTAGGGCCTCTGCCACCAAGCCTGCTGGCATCACGAAGCGTCGTTTGTCAGCTTGGCTG
CCCATTCAAGAAACAGACAGAAATCAGTCATTCAACGTGCCATGAATCGATGGAAAGGATGAGAGCCTTTGGCCCAATGTTGCTGGATCTGCCGCACGCCATCATCATACGGATAGCCGAGCATCTCCCATTGACGGATCTGGCCAATTTCATAGCTTCCTGCAAAACCCTCGCGGCCATGGCTGACAACTTCTACGAGG
AGCGTAGGTGCCTCGATATGTCATGCTTCGAACCCCCGACGCTGAGCCCACAGGTTTGCGAGCAGCTGATACGGTGCTTCTCGGCCTCCCGGCTCCACAGTTGCATCTTCCGTTTCGACGTCGGGTGGCACTATAGGTATGATCAAGAAACGCTCGATGCCATCCTCGCCCGCTTTCTTGACAACTTAAACCCCTCCGCT
CGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGTATGATCGACATCCTGACGCACTGTTTCTTTCTCGACAGGTTTCTCTCCTCTCAGCCGTAGCAGAGGGAGCTGGATGTGGACCTGGAGCTGAGCCTTTTCAAGATCCCTAACAGCAGGGTCCAGCGTCTCGACTGACACATGCTCAGCCCCTTTGTTACCAC
TGACATCGTGCAGAGGAATTTCCTGCAGATCGAATCCTACTCCGCTTTAACCTCCTCTTTCCAGGCCTCACATTTGAACCTCCTGCATACCCAAGTTCGATTCCTGGAGCACTTCCCTAGGCTAAGATTCGTGGGGTTCGTGTTCGTCCTCGGGACGGAGGAGCTCGCCACATATGAGCGACTGTGCCACCCGCTGGCGC
TCGAGCGCGCCATGTTTTATTTTCCTGGCTGGCTTGTCTCGTCCGATTTCAATGCCACCAGGGTCCGCAATCTGGGCGCCAGGCTTGTGAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGATCGAATCGCTCTACCTCCGCTGTGAGTTC
AATCCCAGTTACCCTCTCTACGACATCGATGAGGGTTCTGGTTTCTTTTTCGGCGATGTCTTTCACTTGCTTGGGGCGGCCTCTGTTTC
>TRINITY_DN44715_c4_g1_i7 from sample A6 / Example unspliced isoform:CTAGTTGCAGGATTCGTCATCAAAATTTGCAGTTAATATATTTAATAAACTGCTGGTACATGGTCAGCCCAGTCGGGTTCAGATGTCCTTTGGATATATTGGACGCAACTGCCACAGCTACGAAGAGCACTATCCCGTGCGCTAGGGCCTCTGCCACCAAGCCTGCTGGCATCACGAAGCGTCGTTTGTCAGCTTGGCTG
CCCATTCAAGAAACAGACAGAAATCAGTCATTCAgttagtatgccattattctagctctacagACGTGCCATGAATCGATGGAAAGGATGAGAGCCTTTGGCCCAATGTTGCTGGATCTGCCGCACGCCATCATCATACGGATAGCCGAGCATCTCCCATTGACGGATCTGGCCAATTTCATAGCTTCCTGCAAAACCCT
CGCGGCCATGGCTGACAACTTCTACGAGGAGCGTAGGTGCCTCGATATGTCATGCTTCGAACCCCCGACGCTGAGCCCACAGGTTTGCGAGCAGCTGATACGGTGCTTCTCGGCCTCCCGGCTCCACAGTTGCATCTTCCGTTTCGACGTCGGGTGGCACTATAGGTATGATCAAGAAACGCTCGATGCCATCCTCGCCC
GCTTTCTTGACAACTTAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGTATGATCGACATCCTGACGCACTGTTTCTTTCTCGACAGGTTTCTCTCCTCTCAGCCGTAGCAGAGGGAGCTGGATGTGGACCTGGAGCTGAGCCTTTTCAAGATCCCTAACAGCAGGGTCCAGCGTCTCGAC
TGACACATGCTCAGCCCCTTTGTTACCACTGACATCGTGCAGAGGAATTTCCTGCAGATCGAATCCTACTCCGCTTTAACCTCCTCTTTCCAGGCCTCACATTTGAACCTCCTGCATACCCAAGTTCGATTCCTGGAGCACTTCCCTAGGCTAAGATTCGTGGGGTTCGTGTTCGTCCTCGGGACGGAGGAGCTCGCCAC
ATATGAGCGACTGTGCCACCCGCTGGCGCTCGAGCGCGCCATGTTTTATTTTCCTGGCTGGCTTGTCTCGTCCGATTTCAATGCCACCAGGGTCCGCAATCTGGGCGCCAGGCTTGTGAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGA
TCGAATCGCTCTACCTCCGCTGTGAGTTCAATCCCAGTTACCCTCTCTACGACATCGATGAGGGTTCTGGTTTCTTTTTCGGCGATGTCTTTCACTTGCTTGGGGCGGCCTCTGTTTC
Intron 4 GTTATTCAAA ... GCCGATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 57.97 | 29 | 18 | 40 |
| A2 | 57.45 | 20 | 20 | 27 |
| A3 | 60.94 | 25 | 25 | 39 |
| A4 | 60.47 | 17 | 20 | 26 |
| A5 | 51.85 | 26 | 7 | 28 |
| A6 | 73.8 | 49 | 4 | 138 |
| A7 | 61.36 | 68 | 26 | 108 |
| A8 | 61.95 | 43 | 12 | 70 |
| A9 | 69.49 | 90 | 26 | 205 |
| A10 | 61.29 | 120 | 31 | 190 |
>TRINITY_DN45989_c0_g1_i15 from sample A8 / Example spliced isoformTGGTGCTACTGAATAAAAAATTGCGTTGAATTTCAAGATAGTGGGATAGCGGATGATGCAAGCCTCGTTTTCTCCTCCCCAAGGGCCGGCGGCGCACTGAGTTCAGCGTATCCTAGTTGCAGGATTTGTCATCAGAATTTGCAGTTAATATATTTAATAAACTGCTGGTACATGGTCAGCCCAGTCGCGTTCACATGTCC
TTTGGATATATTGGACGCAACTGCCACAGCTACGAAGAGCACTATCCCGTGCGCTAGGGCCTCTGCCACCAAGCCTGCTGGCATCACGAAGCGTCGTTTGTCAGCTTGGCTGCCCATTCAAGAAACAGACAGAAATCAGTCATTCAGTTAGTATGCCATTATTCTAGCTCTACAGACGTGCCATGAATCGATGGAAAGGA
TGAGAGCCTTTGGCCCAATGTTGCTGGATCTGCCGCACGCCATCATCATACGGATAGCCGAGCATCTCCCATTGACGGATCTGCCCAATTTCATAGCTTCCTGCAAGACCCTCGCCGCCATGGCCGGCGACTTCTACGAGGAGCGCAAGTGCCTCGACATGTCGTGCTTTGAACCCGCGACGCAGAGCCCGCGGGTTTGC
GAGCAGCTGATACGGCGCTTCTCGGCCGTCCGGCTCCGCAGTTGCATCTTCCGTTTCGACGTCGGGCGGCACCACAGGTATGATCAAAGAACGCTCGACGCCATCCTCGCCCGCTTTCTTGACAACTTAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGTATGATCGATATCCTGGCGCA
CTGTTTCTTTCTCGACAGGTTTCTCTCCTCTCAGCCGCAGCTGAGGGAGCTGGACGTAGACCTGGAGCTGAGCCTTTTCAAGATCCCCAATAGCAGGGGCCAGCGTCTCGACTGGCAGATGCTAAGCCCCTTTGTTACCACTGATGCCGTGCAGAGGAATTGCCCGCAGATCGAATCCTACTCCGCTTTAACCTCCTCTT
TCCATGCCTCGCAGTTGAACCTCCTGCATACCCAAGTTCGATTCCTGGAGCGCTGCCCCAGCCTGAGATTCGTGGGGTTCGTGTTCGTCCTCGGGATGGAGGAGCTCGCCACATATGAGCGACTGTGCCGCCCGCTGGCGCTCGAGCGCGCCGTGTTTTATCTTCCTGGCTGGCCTGTCTCGTCCGATTTCAATGCCACC
AGGGTCCGCAATCTCGGCGCCAGGCTTGCGAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGATCGAATCGCTCTACCTCCGCTGTGAGTTCAATCCCAGTTACCCTCTCTACGACATCGATGAGGGTTCTGGTTTCTTTTTCGGCGATGT
CTTTCGCTTGCTTGGGGCGGCCTCTGTTTCCAGGGTTACGCTCTAGCGGGTGCCTGAAGATGAGTTTGAGAGTCTTTTCAGGACTGGCACGGGTTCCTTGTTATTGCCTAAGGGGATTCGGGAACTCAGGGTTAAATTGCATTGGTGCAGCCCTAATTTGGATGAGAGGAGAGAAAGATTGCTTCATGGGTTCTTGAAGA
ATTCTCCCCATCTGGATACCTATTGCATTGCTGGGGTGCCACTTATGCCAGTCACACAGGAACACCAACCAAACCCTGTGTTCTACAAGGCCAAAAATTGGAAACCCATTTGTCCTACTTTGAGCTGCTCGTTCATATTTAGTGGGAGTAAGAGAAAAGCCTTCCTTTGAGCTATTCGTTCATATTTATAGGAAAAAAGT
AAAAAATTCTTGAGCTGGATAAAATATGAGCCCTGAGGCGTAAAATTGACAACAGAAATTGCTTGGATGCTATCCTCAATAGACCCTATGAGACTATTAGATTGATTGTTTTTTCCACAGTAGCGTTTGAGTAGAGCATTGCAGCTCAGCTTGTGTACATTACATTTAGATTACTGATTACGTGTCTGGTGGAAACTCCA
TGATTGACAACAGAAATTGCTTGGATGCTATCCTCAATAGACCCTATGAGACTATTGCTTATGGGGTTGAGAAACAGATGAACTGTGACTAAATAAATTCACCTGTTGCTGCTCTGGTCAACATAAACCAGATTAGATTGATTGTTTTTTCCATAGTAGCGCTTGAGTAGAGCATTGTAGCTCAGCTTGTGTACTTTACA
TTTAGATTACTAATTTATTTGTCTGGTGTAAACTCCATCAGTAGCGCTTGAGGAGAGCATTGCAGCTCTACATTTAGATTACTGATTATTTGTCTGGTGGAAACTCCAAGATTGTAATAAACATAAAATGTATTCTGTGAAACCTTAATGTGTTTATTCTAAATTAGTTTATTATTTCATTGTATGTAAACTGGCT
>TRINITY_DN45989_c0_g1_i12 from sample A8 / Example unspliced isoform:TGGTGCTACTGAATAAAAAATTGCGTTGAATTTCAAGATAGTGGGATAGCGGATGATGCAAGCCTCGTTTTCTCCTCCCCAAGGGCCGGCGGCGCACTGAGTTCAGCGTATCCTAGTTGCAGGATTTGTCATCAGAATTTGCAGTTAATATATTTAATAAACTGCTGGTACATGGTCAGCCCAGTCGCGTTCACATGTCC
TTTGGATATATTGGACGCAACTGCCACAGCTACGAAGAGCACTATCCCGTGCGCTAGGGCCTCTGCCACCAAGCCTGCTGGCATCACGAAGCGTCGTTTGTCAGCTTGGCTGCCCATTCAAGAAACAGACAGAAATCAGTCATTCAGTTAGTATGCCATTATTCTAGCTCTACAGgttattcaaaattcctccaacggct
atctgctcgcgacaatagaattagcctgtataataatagccttctgcctctgcctctcttgcatatacagcatgctctttgttcagatttcattctacaatttaatttgacacgatttcttgctgagatttcgttcttgaatttattttcttttgccgatgcagACGTGCCATGAATCGATGGAAAGGATGAGAGCCTTT
GGCCCAATGTTGCTGGATCTGCCGCACGCCATCATCATACGGATAGCCGAGCATCTCCCATTGACGGATCTGCCCAATTTCATAGCTTCCTGCAAGACCCTCGCCGCCATGGCCGGCGACTTCTACGAGGAGCGCAAGTGCCTCGACATGTCGTGCTTTGAACCCGCGACGCAGAGCCCGCGGGTTTGCGAGCAGCTGAT
ACGGCGCTTCTCGGCCGTCCGGCTCCGCAGTTGCATCTTCCGTTTCGACGTCGGGCGGCACCACAGGTATGATCAAAGAACGCTCGACGCCATCCTCGCCCGCTTTCTTGACAACTTAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGTATGATCGATATCCTGGCGCACTGTTTCTTTC
TCGACAGGTTTCTCTCCTCTCAGCCGCAGCTGAGGGAGCTGGACGTAGACCTGGAGCTGAGCCTTTTCAAGATCCCCAATAGCAGGGGCCAGCGTCTCGACTGGCAGATGCTAAGCCCCTTTGTTACCACTGATGCCGTGCAGAGGAATTGCCCGCAGATCGAATCCTACTCCGCTTTAACCTCCTCTTTCCATGCCTCG
CAGTTGAACCTCCTGCATACCCAAGTTCGATTCCTGGAGCGCTGCCCCAGCCTGAGATTCGTGGGGTTCGTGTTCGTCCTCGGGATGGAGGAGCTCGCCACATATGAGCGACTGTGCCGCCCGCTGGCGCTCGAGCGCGCCGTGTTTTATCTTCCTGGCTGGCCTGTCTCGTCCGATTTCAATGCCACCAGGGTCCGCAA
TCTCGGCGCCAGGCTTGCGAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGATCGAATCGCTCTACCTCCGCTGTGAGTTCAATCCCAGTTACCCTCTCTACGACATCGATGAGGGTTCTGGTTTCTTTTTCGGCGATGTCTTTCGCTTGC
TTGGGGCGGCCTCTGTTTCCAGGGTTACGCTCTAGCGGGTGCCTGAAGATGAGTTTGAGAGTCTTTTCAGGACTGGCACGGGTTCCTTGTTATTGCCTAAGGGGATTCGGGAACTCAGGGTTAAATTGCATTGGTGCAGCCCTAATTTGGATGAGAGGAGAGAAAGATTGCTTCATGGGTTCTTGAAGAATTCTCCCCAT
CTGGATACCTATTGCATTGCTGGGGTGCCACTTATGCCAGTCACACAGGAACACCAACCAAACCCTGTGTTCTACAAGGCCAAAAATTGGAAACCCATTTGTCCTACTTTGAGCTGCTCGTTCATATTTAGTGGGAGTAAGAGAAAAGCCTTCCTTTGAGCTATTCGTTCATATTTATAGGAAAAAAGTAAAAAATTCTT
GAGCTGGATAAAATATGAGCCCTGAGGCGTAAAATTGACAACAGAAATTGCTTGGATGCTATCCTCAATAGACCCTATGAGACTATTAGATTGATTGTTTTTTCCACAGTAGCGTTTGAGTAGAGCATTGCAGCTCAGCTTGTGTACATTACATTTAGATTACTGATTACGTGTCTGGTGGAAACTCCATGATTGACAAC
AGAAATTGCTTGGATGCTATCCTCAATAGACCCTATGAGACTATTGCTTATGGGGTTGAGAAACAGATGAACTGTGACTAAATAAATTCACCTGTTGCTGCTCTGGTCAACATAAACCAGATTAGATTGATTGTTTTTTCCATAGTAGCGCTTGAGTAGAGCATTGTAGCTCAGCTTGTGTACTTTACATTTAGATTACT
AATTTATTTGTCTGGTGTAAACTCCATCAGTAGCGCTTGAGGAGAGCATTGCAGCTCTACATTTAGATTACTGATTATTTGTCTGGTGGAAACTCCAAGATTGTAATAAACATAAAATGTATTCTGTGAAACCTTAATGTGTTTATTCTAAATTAGTTTATTATTTCATTGTATGTAAACTGGCT
Intron 5 GTATGATCAA ... TTCTCGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 90.24 | 2 | 30 | 7 |
| A2 | 85.71 | 4 | 26 | 22 |
| A3 | 85.96 | 4 | 24 | 25 |
| A4 | 95.12 | 1 | 26 | 13 |
| A5 | 88.46 | 3 | 29 | 17 |
| A6 | 89.47 | 12 | 112 | 92 |
| A7 | 88.19 | 16 | 102 | 137 |
| A8 | 89.77 | 9 | 76 | 82 |
| A9 | 85.6 | 26 | 153 | 156 |
| A10 | 86.96 | 21 | 142 | 138 |
>TRINITY_DN45989_c0_g1_i2 from sample A8 / Example spliced isoformACGTGCCATGAATCGATGGAAAGGATGAGAGCCTTTGGCCCAATGTTGCTGGATCTGCCGCACGCCATCATCATACGGATAGCCGAGCATCTCCCATTGACGGATCTGGCCAATTTCATAGCTTCCTGCAAAACCCTCGCGGCCATGGCTGACAACTTCTACGAGGAGCGTAGGTGCCTCGATATGTCATGCTTCGAACC
CCCGACGCTGAGCCCACAGGTTTGCGAGCAGCTGATACGGTGCTTCTCGGCCTCCCGGCTCCACAGTTGCATCTTCCGTTTCGACGTCGGGTGGCACTATAGGTTTCTCTCCTCTCAGCCGTAGCAGAGGGAGCTGGATGTGGACCTGGAGCTGAGCCTTTTCAAGATCCCTAACAGCAGGGTCCAGCGTCTCGACTGAC
ACATGCTCAGCCCCTTTGTTACCACTGACATCGTGCAGAGGAATTTCCTGCAGATCGAATCCTACTCCGCTTTAACCTCCTCTTTCCAGGCCTCACATTTGAACCTCCTGCATACCCAAGTTCGATTCCTGGAGCACTTCCCTAGGCTAAGATTCGTGGGGTTCGTGTTCGTCCTCGGGATGGAGGAGCTCGCCACATAT
GAGCGACTGTGCCACCCGCTGGCGCTCGAGCGCGCCATGTTTTATTTTCCTGGCTGGCTTGTCTCGTCCGATTTCAATGCCACCAGGGTCCGCAATCTGGGCGCCAGGCTTGTGAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGATCGA
ATCGCTCTACCTCCGCTGTGAGTTCAATCCCAGTTACCCTCTCTACGACATCGATGAGGGTTCTGGTTTCTTTTTCGGCGATGTCTTTCGCTTGCTTGGGGCGGCCTCTGTTTC
>TRINITY_DN45989_c0_g1_i17 from sample A8 / Example unspliced isoform:ACGTGCCATGAATCGATGGAAAGGATGAGAGCCTTTGGCCCAATGTTGCTGGATCTGCCGCACGCCATCATCATACGGATAGCCGAGCATCTCCCATTGACGGATCTGGCCAATTTCATAGCTTCCTGCAAAACCCTCGCGGCCATGGCTGACAACTTCTACGAGGAGCGTAGGTGCCTCGATATGTCATGCTTCGAACC
CCCGACGCTGAGCCCACAGGTTTGCGAGCAGCTGATACGGTGCTTCTCGGCCTCCCGGCTCCACAGTTGCATCTTCCGTTTCGACGTCGGGTGGCACTATAGgtatgatcaagaaacgctcgatgccatcctcgcccgctttcttgacaacttaaacccctccgctcggcagctccattccgatctcctcagcgggagcc
cgcgtatgatcgacatcctgacgcactgtttctttctcgacagGTTTCTCTCCTCTCAGCCGTAGCAGAGGGAGCTGGATGTGGACCTGGAGCTGAGCCTTTTCAAGATCCCTAACAGCAGGGTCCAGCGTCTCGACTGACACATGCTCAGCCCCTTTGTTACCACTGACATCGTGCAGAGGAATTTCCTGCAGATCGAA
TCCTACTCCGCTTTAACCTCCTCTTTCCAGGCCTCACATTTGAACCTCCTGCATACCCAAGTTCGATTCCTGGAGCACTTCCCTAGGCTAAGATTCGTGGGGTTCGTGTTCGTCCTCGGGATGGAGGAGCTCGCCACATATGAGCGACTGTGCCACCCGCTGGCGCTCGAGCGCGCCATGTTTTATTTTCCTGGCTGGCT
TGTCTCGTCCGATTTCAATGCCACCAGGGTCCGCAATCTGGGCGCCAGGCTTGTGAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGATCGAATCGCTCTACCTCCGCTGTGAGTTCAATCCCAGTTACCCTCTCTACGACATCGATGAGG
GTTCTGGTTTCTTTTTCGGCGATGTCTTTCGCTTGCTTGGGGCGGCCTCTGTTTC
Intron 6 GTAACACCAC ... GCCGATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 75.44 | 14 | 2 | 43 |
| A2 | 66.67 | 14 | 6 | 28 |
| A3 | 75.86 | 14 | 2 | 44 |
| A4 | 78.13 | 7 | 0 | 25 |
| A5 | 61.11 | 14 | 0 | 22 |
| A6 | 73.23 | 53 | 2 | 145 |
| A7 | 63.74 | 62 | 6 | 109 |
| A8 | 72.48 | 30 | 10 | 79 |
| A9 | 70.86 | 88 | 4 | 214 |
| A10 | 66.56 | 104 | 13 | 207 |
>TRINITY_DN45989_c0_g1_i16 from sample A8 / Example spliced isoformGCTCGCGACGATAGAATTAGCCTGTATAATATCCTGCTGCCTCTGCCTCTGCCTCTGCCTCTCTTCCATATATATACACCAACGCGCCGTGAATCGATGGAAAGGCCGAGAGCCTTTGGCCCAATATTGCTGGATCTGCCTCACGCCATCATCATTCGTATAGCCGAGCATCTCCCATTGACGGATCTGCCCAATTTCAT
AGCTTCCTGCAAGACCCTCGCCGCCATGGCCGGCGACTTCTACGAGGAGCGCAAGTGCCTCGACATGTCGTGCTTTGAACCCGCGACGCAGAGCCCGCGGGTTTGCGAGCAGCTGATACGGCGCTTCTCGGCCGTCCGGCTCCGCAGTTGCATCTTCCGTTTCGACGTCGGGCGGCACCACAGGTATGATCAAAGAACGC
TCGACGCCATCCTCGCCCGCTTTCTTGACAACTTAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGTATGATCGATATCCTGGCGCACTGTTTCTTTCTCGACAGGTTTCTCTCCTCTCAGCCGCAGCTGAGGGAGCTGGACGTAGACCTGGAGCTGAGCCTTTTCAAGATCCCCAATAGC
AGGGGCCAGCGTCTCGACTGGCAGATGCTAAGCCCCTTTGTTACCACTGATGCCGTGCAGAGGAATTGCCCGCAGATCGAATCCTACTCCGCTTTAACCTCCTCTTTCCATGCCTCGCAGTTGAACCTCCTGCATACCCAAGTTCGATTCCTGGAGCGCTGCCCCAGCCTGAGATTCGTGGGGTTCGTGTTCGTCCTCGG
GATGGAGGAGCTCGCCACATATGAGCGACTGTGCCGCCCGCTGGCGCTCGAGCGCGCCGTGTTTTATCTTCCTGGCTGGCCTGTCTCGTCCGATTTCAATGCCACCAGGGTCCGCAATCTCGGCGCCAGGCTTGCGAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCT
TCGCCTCCATGCCCAGGATCGAATCGCTCTACCTCCGCTGTGAGTTCAATCCCAGTTACCCTCTCTACGACATCGATGAGGGTTCTGGTTTCTTTTTCGGCGATGTCTTTCGCTTGCTTGGGGCGGCCTCTGTTTCTAGGGTTACGCTCTGGGGGGTGCCTGAAGATGAGTTTGAGAGTCTTTTCGGGACCGGCACGGGT
TCCTTGTTATTGCCTAAGGGGATTCGGGAACTCAGGGTTCAGCTGCATTGGAGCAGCCCTAATTTGGATGAGAGGAGAGAAAGATTGCTTCATGGGTTCTTGAAGAATTCTCCCCATCTGGATACCTATTGCATTGCTGGGGTGCCACCTGTGCCAGTCACACAGGAACACCAGCCAAACCCTGTGTTCTACAAGGCCAA
AAATTGGAAACCCATTTGTCCTACTTTGAGCTGCTCGTTCATATTTAGTGGGAGTAAGAGAAAAGCCTTCCTTTGAGCTGTTCGTTCATATTTACAGGAAAAAAGTAAAAAATTCTTGAGCTGGATAAAATATGTTTGAGCCCTGAGGCGTAAAATTGACAACAGAAATTGCTTGGATGCTATCCTCAATAGACCCTAAA
CCCTGTGAGACTATTAGATTGATTGTTTTTTCCACAGTAGCGTTTGAGTAGAGCATTGCAGCTCAGCTTGTGTACATTACATTTAGATTACTGATTACGTGTCTGGTGGAAACTCCATGATTGACAACAGAAATTGCTTGGATGCTATCCTCAATAGACCCTGTGAGACTATTGCTTATGGGGTTGAGAAACAGATGAAC
TGTGACTAAATAAATTCACCTGTTGCTGCTCTGGTCAACATAAACCAGATTAGATTGATTGTTTTTTCCATAGTAGCGCTTGAGTAGAGCATTGTAGCTCAGCTTGTGTACTTTACATTTAGATTACTAATTTATTTGTCTGGTGTAAACTCCATCAGTAGCGCTTGAGGAGAGCATTGCAGCTCTACATTTAGATTACT
GATTATTTGTCTGGTGGAAACTCCAAGATTGTAATAAACATAAAATGTATTCTGTGAAACCTTAATGTGTTTATTCTAAATTAGTTTATTATTTCATTGTATGTAAACTGGCT
>TRINITY_DN45989_c0_g1_i4 from sample A8 / Example unspliced isoform:GCTCGCGACGATAGAATTAGCCTGTATAATATCCTGCTGCCTCTGCCTCTGCCTCTGCCTCTCTTCCATATATATACACCAgtaacaccacgctctttgttcagatttcattctgcaatttattttgacacgagttcttgcacagatttcaaaaattcctccaacggctatctgctcgcgacaatagaattagcctgtat
aataatagccttctgcctctgcctctcttgcatatacagcatgctctttgttcagatttcattctacaatttaatttgacacgatttcttgctgagatttcgttcttgaatttattttcttttgccgatgcagACGCGCCGTGAATCGATGGAAAGGCCGAGAGCCTTTGGCCCAATATTGCTGGATCTGCCTCACGCCA
TCATCATTCGTATAGCCGAGCATCTCCCATTGACGGATCTGCCCAATTTCATAGCTTCCTGCAAGACCCTCGCCGCCATGGCCGGCGACTTCTACGAGGAGCGCAAGTGCCTCGACATGTCGTGCTTTGAACCCGCGACGCAGAGCCCGCGGGTTTGCGAGCAGCTGATACGGCGCTTCTCGGCCGTCCGGCTCCGCAGT
TGCATCTTCCGTTTCGACGTCGGGCGGCACCACAGGTATGATCAAAGAACGCTCGACGCCATCCTCGCCCGCTTTCTTGACAACTTAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGTATGATCGATATCCTGGCGCACTGTTTCTTTCTCGACAGGTTTCTCTCCTCTCAGCCGCAGCT
GAGGGAGCTGGACGTAGACCTGGAGCTGAGCCTTTTCAAGATCCCCAATAGCAGGGGCCAGCGTCTCGACTGGCAGATGCTAAGCCCCTTTGTTACCACTGATGCCGTGCAGAGGAATTGCCCGCAGATCGAATCCTACTCCGCTTTAACCTCCTCTTTCCATGCCTCGCAGTTGAACCTCCTGCATACCCAAGTTCGAT
TCCTGGAGCGCTGCCCCAGCCTGAGATTCGTGGGGTTCGTGTTCGTCCTCGGGATGGAGGAGCTCGCCACATATGAGCGACTGTGCCGCCCGCTGGCGCTCGAGCGCGCCGTGTTTTATCTTCCTGGCTGGCCTGTCTCGTCCGATTTCAATGCCACCAGGGTCCGCAATCTCGGCGCCAGGCTTGCGAATGTGAAGAAG
GCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGATCGAATCGCTCTACCTCCGCTGTGAGTTCAATCCCAGTTACCCTCTCTACGACATCGATGAGGGTTCTGGTTTCTTTTTCGGCGATGTCTTTCGCTTGCTTGGGGCGGCCTCTGTTTCTAGGGTTACGCT
CTGGGGGGTGCCTGAAGATGAGTTTGAGAGTCTTTTCGGGACCGGCACGGGTTCCTTGTTATTGCCTAAGGGGATTCGGGAACTCAGGGTTCAGCTGCATTGGAGCAGCCCTAATTTGGATGAGAGGAGAGAAAGATTGCTTCATGGGTTCTTGAAGAATTCTCCCCATCTGGATACCTATTGCATTGCTGGGGTGCCAC
CTGTGCCAGTCACACAGGAACACCAGCCAAACCCTGTGTTCTACAAGGCCAAAAATTGGAAACCCATTTGTCCTACTTTGAGCTGCTCGTTCATATTTAGTGGGAGTAAGAGAAAAGCCTTCCTTTGAGCTGTTCGTTCATATTTACAGGAAAAAAGTAAAAAATTCTTGAGCTGGATAAAATATGTTTGAGCCCTGAGG
CGTAAAATTGACAACAGAAATTGCTTGGATGCTATCCTCAATAGACCCTAAACCCTGTGAGACTATTAGATTGATTGTTTTTTCCACAGTAGCGTTTGAGTAGAGCATTGCAGCTCAGCTTGTGTACATTACATTTAGATTACTGATTACGTGTCTGGTGGAAACTCCATGATTGACAACAGAAATTGCTTGGATGCTAT
CCTCAATAGACCCTGTGAGACTATTGCTTATGGGGTTGAGAAACAGATGAACTGTGACTAAATAAATTCACCTGTTGCTGCTCTGGTCAACATAAACCAGATTAGATTGATTGTTTTTTCCATAGTAGCGCTTGAGTAGAGCATTGTAGCTCAGCTTGTGTACTTTACATTTAGATTACTAATTTATTTGTCTGGTGTAA
ACTCCATCAGTAGCGCTTGAGGAGAGCATTGCAGCTCTACATTTAGATTACTGATTATTTGTCTGGTGGAAACTCCAAGATTGTAATAAACATAAAATGTATTCTGTGAAACCTTAATGTGTTTATTCTAAATTAGTTTATTATTTCATTGTATGTAAACTGGCT
Intron 7 GTTCAAATGC ... CATTTTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 55.55 | 9 | 7 | 15.5 |
| A2 | 30.43 | 8 | 4 | 3 |
| A3 | 51.22 | 10 | 10 | 11 |
| A4 | 100 | 0 | 5 | 7 |
| A5 | 72.73 | 3 | 6 | 10 |
| A6 | 66.67 | 1 | 2 | 2 |
| A7 | 40.74 | 8 | 8 | 3 |
| A8 | 55.56 | 4 | 5 | 5 |
| A9 | 75 | 1 | 3 | 3 |
| A10 | 39.23 | 7 | 4 | 5 |
>TRINITY_DN117464_c0_g1_i1 from sample A3 / Example spliced isoformCTCGGCTCCACAGTTGCATCTTCTGTTTCGACGTCGGGTGGCACTATAGGTATGATCAAGAAACGCTCGATGCCATCCTCGCCCGCTTTCTTGACAACATAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGTATGATCAGATGCATCTTCATGCTTAGGATGCACACACTTCTCACTCTG
GCTTGAGAGGTTTGAAGCTGAAGGTTCCTTCTCTTGAGCACAATGGCAAAGTCGTAGGAGAGAGTTAGGATTTATTCGAGTATCTTGAGAACAATTTCGAAGGACCT
>TRINITY_DN117464_c0_g1_i2 from sample A3 / Example unspliced isoform:CTCGGCTCCACAGTTGCATCTTCTGTTTCGACGTCGGGTGGCACTATAGGTATGATCAAGAAACGCTCGATGCCATCCTCGCCCGCTTTCTTGACAACATAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGTATGATCAGATGCATCTTCATGCTTAGGATGCACACACTTCTCACTCTG
GCTTGAGAGGTTTGAAGCTGAAGgttcaaatgcaattccaagctttatcagacccacttctcactgtggatgagaggcttcaatgaatttttaatcattatgatggtttagccttttacaatttgggtgtgaagtaacaataaccaacaaagatttgagattgattttacatctccagtcaactgtgataaccaacttct
tttgtgtttgaaatgtgatgatgtttagattagtggaatttgcaatagaaatagaaatgccaaatgtgaaatggtacaaaggggtgaaaatctgcaagatatagagcagaacttacaaacaactgactattttcattttccagGTTCCTTCTCTTGAGCACAATGGCAAAGTCGTAGGAGAGAGTTAGGATTTATTCGAG
TATCTTGAGAACAATTTCGAAGGACCT
Intron 8 GTACGCCATT ... AGCTCTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 76.82 | 9 | 30 | 29.7 |
| A2 | 93.48 | 1 | 9 | 19.7 |
| A3 | 78.93 | 6 | 20 | 25 |
| A4 | 100 | 0 | 18 | 19 |
| A5 | 85.94 | 3 | 10 | 26.7 |
| A6 | 74.97 | 10 | 17 | 43.7 |
| A7 | 72.49 | 20 | 40 | 65.7 |
| A8 | 81.38 | 8 | 27 | 43 |
| A9 | 73.59 | 22 | 40 | 83.3 |
| A10 | 84.42 | 17 | 66 | 119 |
>TRINITY_DN48483_c0_g1_i3 from sample A7 / Example spliced isoformAGCAGCATATATATAAAGGGAGACCAAACAGAAAAATTACGGCATGTATACATGCATCGTACACCTACAGTTCCAAGATGAGCCTCGTTTTCTCCTCCCCAGGGGCCGGCGGCGCGCTGAGTTCAGCGTATCCTAGTTGCAGGATTTGTCATCAGAATTTGCAGTTAATATATTTAATAAACTGCTGGTACATGGTCAGC
CCAGTCGCGTTCACATGTCCTTTGGATATATTGGACGCAACTGCCACAGCTACGAAGAGCACTATCCCGTGCGCTAGGGCCTCTGCCACCAAGCCTGCTGGCATCACGAAGCGTCGTTTGTCAGCTTGGCTGCCCATTCAAGAAACAGACAGAAATCAGTCATTCAGTTAACGTGCCATGAATCGATGGAAAG
>TRINITY_DN48483_c0_g1_i9 from sample A7 / Example unspliced isoform:AGCAGCATATATATAAAGGGAGACCAAACAGAAAAATTACGGCATGTATACATGCATCGTACACCTACAGTTCCAAGATGAGCCTCGTTTTCTCCTCCCCAGGGGCCGGCGGCGCGCTGAGTTCAGCGTATCCTAGTTGCAGGATTTGTCATCAGAATTTGCAGTTAATATATTTAATAAACTGCTGGTACATGGTCAGC
CCAGTCGCGTTCACATGTCCTTTGGATATATTGGACGCAACTGCCACAGCTACGAAGAGCACTATCCCGTGCGCTAGGGCCTCTGCCACCAAGCCTGCTGGCATCACGAAGCGTCGTTTGTCAGCTTGGCTGCCCATTCAAGAAACAGACAGAAATCAGTCATTCAGTTAgtacgccattattctagctctacagACGTG
CCATGAATCGATGGAAAGGATGAGAGCCTTTGGCCCAATGTTGCTGGATCTGCCGCACGCCATCATCATACGGATAGCCGAGCATCTCCCATTGACGGATCTGCCCAATTTCATAGCTTCCTGCAAGACCCTCGCCGCCATGGCCGGCGACTTCTACGAGGAGCGCAAGTGCCTCGACATGTCGTGCTTTGAACCCGCGA
CGCAGAGCCCGCGGGTTTGCGAGCAGCTGATACGGCGCTTCTCGGCCGTCCGGCTCCGCAGTTGCATCTTCCGTTTCGACGTCGGGCGGCACCACAGGTATGATCAAAGAACGCTCGACGCCATCCTCGCCCGCTTTCTTGACAACATAAACCCCTCCGCTCGGCAGCTCCACGCCGATCTCCTCAGCGGGAGCCCGCGT
ATGATCGATATCCTGGCGCACTGTTTCTTTCTCGACAGGTTTCTCTCCTCTCAGCCGCAGCTGAGGGAGCTGGACGTAGACCTGGAGCTGAGCCTTTTCAAGATCCCCAATAGCAGGGGCCAGCGTCTCGACTGGCAGATGCTAAGCCCCTTTGTTACCACTGATGCCGTGCAGAGGAATTGCCCGCAGATCGAATCCTA
CTCCGCTTTAACCTCCTCTTTCCATGCCTCGCAGTTGAACCTCCTGCATACCCAAGTTCGATTCCTGGAGCGCTGCCCCAGCCTGAGATTCGTGGGGTTCGTGTTCGTCCTCGGGACGGAGGAGCTCGCCACATATGAGCGACTGTGCCGCCCGCTGGCGCTCGAGCGCGCCGTGTTTTATCTTCCTGGCTGGCCTGTCT
CGTCCGATTTCAATGCCACCAGGGTCCGCAATCTCGGCGCCAGGCTTGCGAATGTGAAGAAGGCAGTTGTGACTTTCAGGCGCAGGGGATGCCTCAGGGACTGTGGGGATCTCTTCGCCTCCATGCCCAGGATCGAATCGCTCTACCTCCGCTGCGAGTTCAATCCCAGTCACCCTCTCTACGACATCGATGAGGGTTCT
GGTTTCTTTTTCGGCGATGTCTTTCACTTGCTTGGGGCGGCCTCTGTTTCCAGGGTTACGCTCTGGGGGGTGCCTGAAGATGAGTTTGAGAGTCTTTTCGGGACCGGCACGGGTTCCTTGTTATTGCCTAAGGGGATTCGGGAACTCAGGGTTCAGCTGCATTGGAGCAGCCCTAATTTGGATGAGAGGAGAGAAAGATT
GCTTCATGGGTTCTTGAAGAATTCTCCCCATCTGGATACCTATTGCATTGCTGGGGTGCCACCTGTGCCAGTCACACAGGAACACCAGCCAAACCCTGTGTTCTACAAGGCCAAAAATTGGAAACCCATTTGTCCTACTTTGAGCTGCTCGTTCATATTTAGTGGGAGTAAGAGAAAAGCCTTCCTTTGAGCTGTTCGTT
CATATTTACAGGGAAAAAGTAAAAAATTCTTGAGCTGGATAAAATATGTTTGAGCCCTGAGGCGTAAAATTGACAACAGAAATTGCTTGGATGCTATCCTCAATA