NA ----> NA
Intron 1 GTATTATTTC ... GCTCATGTAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | -1 | 0 | 0 | 0 |
| A2 | 100 | 0 | 5 | 0 |
| A3 | -1 | 0 | 0 | 0 |
| A4 | 100 | 0 | 2 | 0 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 30.43 | 8 | 4 | 3 |
| A7 | 100 | 0 | 6 | 1 |
| A8 | 100 | 0 | 3 | 2 |
| A9 | 40 | 3 | 2 | 2 |
| A10 | 38.46 | 4 | 1 | 4 |
>TRINITY_DN25824_c0_g1_i2 from sample A6 / Example spliced isoformCGAGAGGCCATAGTGCGCAACGAAGGTTTCACGGCTTACCAGGCCTATTGAATCCATGATGACCCATTTCCCTTTCTTCCATGAGAGGGTATGGCGAGGTTGATTTTTGGTGACCTCGATCTCAATATACATGAAGGTTTTCTCGCATCTACTACTTGTTTGGAATTGAACGGAGAGAGGTGGTTTAAAATTTTTCCTAT
AAAAGATATACAAGATATACAATGGAGCAATCTTCTCAAGTCCAAGAAGTAGACTTATCATCACAAAGGTATGCATGTTAATCTGCTAAAAATGAAATGGCAAGAACTAATTGAGGGATGATATGGCTTAGTTTATATTACCACATCCATATTTTGATGGTTTTCTTAGTCTCTGAATTAAATTTTCCATTTGATCTTCT
TAAAATTATGAGTAAAATGTATAATTTTTACACAGTGTGGGTATAGAAACCTTTATTGTAGTCTGTTTCACTACAGCTTGATCCGAGC
>TRINITY_DN25824_c0_g1_i1 from sample A6 / Example unspliced isoform:CGAGAGGCCATAGTGCGCAACGAAGGTTTCACGGCTTACCAGGCCTATTGAATCCATGATGACCCATTTCCCTTTCTTCCATGAGAGGGTATGGCGAGGTTGATTTTTGgtattatttcttcgatgcattttatttctccttgggctatgcttattctccattagggttcgaaaccctttcctgtttcatttccattaaa
cctttgaatttttccatggatcctgttgttctatacgaccctgatggcgctgaaattatccatgaatacaatggctctctctccgttataagaagtgagggatggtgggatttacttcatacattccacaaccataatgttagggtttatcaggtttattccaatcatttaatggaaaaattgctcatgtagGTGACCTC
GATCTCAATATACATGAAGGTTTTCTCGCATCTACTACTTGTTTGGAATTGAACGGAGAGAGGTGGTTTAAAATTTTTCCTATAAAAGATATACAAGATATACAATGGAGCAATCTTCTCAAGTCCAAGAAGTAGACTTATCATCACAAAGGTATGCATGTTAATCTGCTAAAAATGAAATGGCAAGAACTAATTGAGGG
ATGATATGGCTTAGTTTATATTACCACATCCATATTTTGATGGTTTTCTTAGTCTCTGAATTAAATTTTCCATTTGATCTTCTTAAAATTATGAGTAAAATGTATAATTTTTACACAGTGTGGGTATAGAAACCTTTATTGTAGTCTGTTTCACTACAGCTTGATCCGAGC
Intron 2 GTATGGCGAG ... GCTCATGTAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | -1 | 0 | 0 | 0 |
| A2 | 100 | 0 | 4 | 0 |
| A3 | -1 | 0 | 0 | 0 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 30.43 | 8 | 4 | 3 |
| A7 | 100 | 0 | 5 | 1 |
| A8 | 100 | 0 | 2 | 2 |
| A9 | 33.33 | 2 | 0 | 2 |
| A10 | 38.46 | 4 | 1 | 4 |
>TRINITY_DN27828_c0_g1_i2 from sample A7 / Example spliced isoformGAGGCCATAGTGCGCAACGAAGGTTTCACGGCTTACCAGGCCTATTGAATCCATGATGACCCATTTCCCTTTCTTCCATGAGAGGGTGACCTCGATCTCAATATACATGAAGGTTTTCTCGCATCTACTACTTGTTTGGAATTGAACGGAGAGAGGTGGTTTAAAATTTTTCCTATAAAAGATATACAAGATATACAATG
GAGCAATCTTCTCAAGTCCAAGAAGTAGACTTATCATCACAAAGGTATGCATGTTAATCTGCTAAAAATGAAATGGCAAGAACTAATTGAGGGATGATATGGCTTAGTTTATATTACCACATCCATATTTTGATGGTTTTCTTAGTCTCTGAATTAAATTTTCCATTTGATCTTCTTAAAATTATGAGTAAAATGTATAA
TTTTTACCCAGTGTGGGTATAGAAACCTTTATTGTAGTCTGTTTCACTACAGCTTGATCCGAGTCCTGGTAGAATATAGACTGTCTCAATTAGGGGATTCATGGGAGAAAGAACTT
>TRINITY_DN27828_c0_g1_i1 from sample A7 / Example unspliced isoform:GAGGCCATAGTGCGCAACGAAGGTTTCACGGCTTACCAGGCCTATTGAATCCATGATGACCCATTTCCCTTTCTTCCATGAGAGGgtatggcgaggttgatttttggtattatttcttcgatgcattttatttctccttgggctatgcttattctccattagggttcgaaacccttccctgtttcatttccattaaacct
ttgaatttttccatggatcctgttgttctatacgaccctgatggcgctgaaattatccatgaatacaatggctctctctccgttataagaagtgagggatggtgggatttacttcatacattccacaaccataatgttagggtttatcaggtttattccaatcatttaatggaaaaattgctcatgtagGTGACCTCGAT
CTCAATATACATGAAGGTTTTCTCGCATCTACTACTTGTTTGGAATTGAACGGAGAGAGGTGGTTTAAAATTTTTCCTATAAAAGATATACAAGATATACAATGGAGCAATCTTCTCAAGTCCAAGAAGTAGACTTATCATCACAAAGGTATGCATGTTAATCTGCTAAAAATGAAATGGCAAGAACTAATTGAGGGATG
ATATGGCTTAGTTTATATTACCACATCCATATTTTGATGGTTTTCTTAGTCTCTGAATTAAATTTTCCATTTGATCTTCTTAAAATTATGAGTAAAATGTATAATTTTTACCCAGTGTGGGTATAGAAACCTTTATTGTAGTCTGTTTCACTACAGCTTGATCCGAGTCCTGGTAGAATATAGACTGTCTCAATTAGGGG
ATTCATGGGAGAAAGAACTT