sp|Q9ZTT5|CAMT_PINTA ----> Caffeoyl-CoA O-methyltransferase
Intron 1 GTAGGCAATT ... TGTGTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40.63 | 19 | 13 | 4 |
| A2 | 37.21 | 27 | 16 | 1 |
| A3 | 38.38 | 20.3 | 12.7 | 4.3 |
| A4 | 25.93 | 20 | 7 | 5.7 |
| A5 | 58.33 | 5 | 7 | 3.7 |
| A6 | 38.1 | 26 | 16 | 2.7 |
| A7 | 34.59 | 87 | 46 | 11.7 |
| A8 | 29.89 | 61 | 26 | 8 |
| A9 | 26.39 | 53 | 19 | 8.7 |
| A10 | 29.27 | 58 | 24 | 1.3 |
>TRINITY_DN130858_c1_g1_i1 from sample A1 / Example spliced isoformATTCAACGTTTGTTATTGTTATTGTTAATCCCTCTCACAATTAACGTTTGGTTTTTTTGTGTGCATCTCATAATTAACCGGTAGCGGTAATTGGTATTCCTTTGGGCCTGTCCATATGGCGGTGCTTTCTATTATCTGAGCGCTCAGATATGCTTCCGGTGATAGCTCTGGTCACTGTGATAGGCAGAGTGTTCTTAATA
GAGAGCTAATACATCTATTTTCTGCAGCGCTGCAAACCACGGTTCTAGAGGATTCGAACCCGGGACGAGTACGAGGTTGTGGTGCAGGATTCGAAACCGGGATGAGCTACTACATCTATTTTCTTCAACTAGCATAGCTCTTCTAGACGAGATCTGCAGTTATGTTATCAATAGTACTCCCGAAATCATATCAGAAGGCG
GATTCGGAAATTAATCTTGCAACTGTGTAAGTAAATAATGCAGGCACAGATATTCAACACCCAGCTCCAGCAGACGTGAAGGTGGACTCAACCCAAGGACAGGAGTACAGTAAGGTTGCCATCCGTCAGAAAATGGACCACAAAAGTCTGTTGCAGAGCCATGCCCTCTATCAGGTTAGTCTCACCTCCACTGGGCTCTG
CGGGTTTTACATAAATTTAGCAGATCCATTCAGGGATTAAGTTAATGCTTGCCTCCATGTACTTGTCATGTGGAAATGCCTATCGATGTTAATATTGCAGTATATCATGAAAACAAGCGTGTACCCTCATGATCCCGAGCCATTGAAGGAGCTCCGAGAATTGACATTCAAAAAACCCTGGTAAGCCCCACCTATCCATC
TGATCTCTTTGTGTGGCTCCAGATTCCTTAAATACAAATGGCTGCTGCTGTCCTTGCAAAGCCAGTTTTCATGGTGTGAAACAACTGTGAATTGTCTGATATGTAACTGGCACGGCATTGCTATTCCTCTGGATGAAGGTCAATTTCTGGCCTCCTGCTGAAGCTGATGAACGCCAAGAACACCATAGAGGTTGGGGTTT
ACATTCTTGAGATCATACCCCGGATTCAGAAATAGTAATCCTTACATCATACGCTGGATTCGGAAATTAGTGCAGCCATTGAATACAATTCTGTCCCACGGAACAGAAAGATTCATGTGGACTGAAACTA
>TRINITY_DN130858_c1_g1_i3 from sample A1 / Example unspliced isoform:ATTCAACGTTTGTTATTGTTATTGTTAATCCCTCTCACAATTAACGTTTGGTTTTTTTGTGTGCATCTCATAATTAACCGGTAGCGGTAATTGGTATTCCTTTGGGCCTGTCCATATGGCGGTGCTTTCTATTATCTGAGCGCTCAGATATGCTTCCGGTGATAGCTCTGGTCACTGTGATAGGCAGAGTGTTCTTAATA
GAGAGCTAATACATCTATTTTCTGCAGCGCTGCAAACCACGGTTCTAGAGGATTCGAACCCGGGACGAGTACGAGGTTGTGGTGCAGGATTCGAAACCGGGATGAGCTACTACATCTATTTTCTTCAACTAGCATAGCTCTTCTAGACGAGATCTGCAGTTATGTTATCAATAGTACTCCCGAAATCATATCAGAAGGCG
GATTCGGAAATTAATCTTGCAACTgtaggcaatttcatttagattatctcagattgttggatatttggggtgattggatgactgtttattatacatacaaaatctgagttgcagaccaaatgcatagagcccatcggggaatgccgatgggattgtgttgggtttttgttttttagttttgattgtggttaattctgttt
tcagctgtgtttcagGTGTAAGTAAATAATGCAGGCACAGATATTCAACACCCAGCTCCAGCAGACGTGAAGGTGGACTCAACCCAAGGACAGGAGTACAGTAAGGTTGCCATCCGTCAGAAAATGGACCACAAAAGTCTGTTGCAGAGCCATGCCCTCTATCAGTATATCATGAAAACAAGCGTGTACCCTCATGATCC
CGAGCCATTGAAGGAGCTCCGAGAATTGACATTCAAAAAACCCTGGTAAGCCCCACCTATCCATCTGATCTCTTTGTGTGGCTCCAGATTCCTTAAATACAAATGGCTGCTGCTGTCCTTGCAAAGCCAGTTTTCATGGTGTGAAACAACTGTGAATTGTCTGATATGTAACTGGCACGGCATTGCTATTCCTCTGGATG
AAGGTCAATTTCTGGCCTCCTGCTGAAGCTGATGAACGCCAAGAACACCATAGAGGTTGGGGTTTACATTCTTGAGATCATACCCCGGATTCAGAAATAGTAATCCTTACATCATACGCTGGATTCGGAAATTAGTGCAGCCATTGAATACAATTCTGTCCCACGGAACAGAAAGATTCATGTGGACTGAAACTA
Intron 2 GTTAGTCTCA ... AATATTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40.4 | 13.3 | 9 | 2.7 |
| A2 | 46.15 | 14 | 12 | 5 |
| A3 | 33.21 | 20.1 | 10 | 6 |
| A4 | 39.38 | 7.7 | 5 | 2 |
| A5 | 56.89 | 4.6 | 6 | 2 |
| A6 | 27.99 | 15.6 | 6 | 1.6 |
| A7 | 21.92 | 53.6 | 15 | 0 |
| A8 | 20.96 | 53.4 | 14 | 1 |
| A9 | 13.22 | 39.7 | 6 | 0 |
| A10 | 18.37 | 58.6 | 13 | 0 |
>TRINITY_DN130858_c1_g1_i3 from sample A1 / Example spliced isoformATTCAACGTTTGTTATTGTTATTGTTAATCCCTCTCACAATTAACGTTTGGTTTTTTTGTGTGCATCTCATAATTAACCGGTAGCGGTAATTGGTATTCCTTTGGGCCTGTCCATATGGCGGTGCTTTCTATTATCTGAGCGCTCAGATATGCTTCCGGTGATAGCTCTGGTCACTGTGATAGGCAGAGTGTTCTTAATA
GAGAGCTAATACATCTATTTTCTGCAGCGCTGCAAACCACGGTTCTAGAGGATTCGAACCCGGGACGAGTACGAGGTTGTGGTGCAGGATTCGAAACCGGGATGAGCTACTACATCTATTTTCTTCAACTAGCATAGCTCTTCTAGACGAGATCTGCAGTTATGTTATCAATAGTACTCCCGAAATCATATCAGAAGGCG
GATTCGGAAATTAATCTTGCAACTGTAGGCAATTTCATTTAGATTATCTCAGATTGTTGGATATTTGGGGTGATTGGATGACTGTTTATTATACATACAAAATCTGAGTTGCAGACCAAATGCATAGAGCCCATCGGGGAATGCCGATGGGATTGTGTTGGGTTTTTGTTTTTTAGTTTTGATTGTGGTTAATTCTGTTT
TCAGCTGTGTTTCAGGTGTAAGTAAATAATGCAGGCACAGATATTCAACACCCAGCTCCAGCAGACGTGAAGGTGGACTCAACCCAAGGACAGGAGTACAGTAAGGTTGCCATCCGTCAGAAAATGGACCACAAAAGTCTGTTGCAGAGCCATGCCCTCTATCAGTATATCATGAAAACAAGCGTGTACCCTCATGATCC
CGAGCCATTGAAGGAGCTCCGAGAATTGACATTCAAAAAACCCTGGTAAGCCCCACCTATCCATCTGATCTCTTTGTGTGGCTCCAGATTCCTTAAATACAAATGGCTGCTGCTGTCCTTGCAAAGCCAGTTTTCATGGTGTGAAACAACTGTGAATTGTCTGATATGTAACTGGCACGGCATTGCTATTCCTCTGGATG
AAGGTCAATTTCTGGCCTCCTGCTGAAGCTGATGAACGCCAAGAACACCATAGAGGTTGGGGTTTACATTCTTGAGATCATACCCCGGATTCAGAAATAGTAATCCTTACATCATACGCTGGATTCGGAAATTAGTGCAGCCATTGAATACAATTCTGTCCCACGGAACAGAAAGATTCATGTGGACTGAAACTA
>TRINITY_DN130858_c1_g1_i1 from sample A1 / Example unspliced isoform:ATTCAACGTTTGTTATTGTTATTGTTAATCCCTCTCACAATTAACGTTTGGTTTTTTTGTGTGCATCTCATAATTAACCGGTAGCGGTAATTGGTATTCCTTTGGGCCTGTCCATATGGCGGTGCTTTCTATTATCTGAGCGCTCAGATATGCTTCCGGTGATAGCTCTGGTCACTGTGATAGGCAGAGTGTTCTTAATA
GAGAGCTAATACATCTATTTTCTGCAGCGCTGCAAACCACGGTTCTAGAGGATTCGAACCCGGGACGAGTACGAGGTTGTGGTGCAGGATTCGAAACCGGGATGAGCTACTACATCTATTTTCTTCAACTAGCATAGCTCTTCTAGACGAGATCTGCAGTTATGTTATCAATAGTACTCCCGAAATCATATCAGAAGGCG
GATTCGGAAATTAATCTTGCAACTGTGTAAGTAAATAATGCAGGCACAGATATTCAACACCCAGCTCCAGCAGACGTGAAGGTGGACTCAACCCAAGGACAGGAGTACAGTAAGGTTGCCATCCGTCAGAAAATGGACCACAAAAGTCTGTTGCAGAGCCATGCCCTCTATCAGgttagtctcacctccactgggctctg
cgggttttacataaatttagcagatccattcagggattaagttaatgcttgcctccatgtacttgtcatgtggaaatgcctatcgatgttaatattgcagTATATCATGAAAACAAGCGTGTACCCTCATGATCCCGAGCCATTGAAGGAGCTCCGAGAATTGACATTCAAAAAACCCTGGTAAGCCCCACCTATCCATC
TGATCTCTTTGTGTGGCTCCAGATTCCTTAAATACAAATGGCTGCTGCTGTCCTTGCAAAGCCAGTTTTCATGGTGTGAAACAACTGTGAATTGTCTGATATGTAACTGGCACGGCATTGCTATTCCTCTGGATGAAGGTCAATTTCTGGCCTCCTGCTGAAGCTGATGAACGCCAAGAACACCATAGAGGTTGGGGTTT
ACATTCTTGAGATCATACCCCGGATTCAGAAATAGTAATCCTTACATCATACGCTGGATTCGGAAATTAGTGCAGCCATTGAATACAATTCTGTCCCACGGAACAGAAAGATTCATGTGGACTGAAACTA