sp|F4IV45|CHR10_ARATH ----> Probable helicase CHR10
Intron 1 GTATGTGTCT ... TACCTGTAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 29.73 | 13 | 5 | 6 |
| A2 | 29.41 | 12 | 3 | 7 |
| A3 | 27.78 | 13 | 5 | 5 |
| A4 | 14.29 | 15 | 3 | 2 |
| A5 | 14.29 | 3 | 1 | 0 |
| A6 | 0 | 2 | 0 | 0 |
| A7 | 14.29 | 3 | 1 | 0 |
| A8 | 20 | 2 | 1 | 0 |
| A9 | 9.09 | 5 | 1 | 0 |
| A10 | 33.33 | 4 | 1 | 3 |
>TRINITY_DN113040_c0_g4_i5 from sample A2 / Example spliced isoformGGGACAGGTAAGCAAGTGTCTTGGCATATAAATCTTGGGATAATTTATTCAACGAAGGACTGTGGAAAAATTGGGGGCGCTCATCATCAAGTTGAACAGGCAAAGAATTGAGTTGCAGAAAACAACATGTGAAGTGATCTGTACCATAAGCTATTTTTAGCCTCGGGAGACGTTAAAATATTTCCTTCCTTCCTGTTTCT
GTTCCTGTTGCGATGGTAACATTCCTGCACTTGATAACCTTGAAGCTTTTCTAGTCGCCACACCTCAACATTCACTCTTAATTTCACGGAGACACACAACCCACTCCACCATAGCTTCCCACTTAACCGACAAACTCCCATAAGAAGAAGAACAGGACGACTCGCTGATTTGAACAACCCAAATTTGGAGGTTAAGAAGG
AAAACAAAAATGGCGGCAGAGATGAATTACGAGCAGAGACTCATAGCAGCGGCACGGCTGGCCGACGACCTGGACACCACGGCTGCCAAAGAATTTGGCATTCCCAGCGCTGAAGAAGTCGCCGAGAAATGCTCAGAATGGGGAGTCACTGCACAGCTGAAGGCTCACCAGGCCCAAGGACTCTCATGGCTTATACGCCG
ATATGCCCGTGGCGTCAATGTTATACTCGGGGACGAGATGGGACTTGGGAAAACATTGCAGGCTATAAGTTTGTTGGCTTACTTGAAAGTTCAACGAAACTGCCCAGGGCCATTTTTGGTATTGTGTCCATTAAGCGTAACAGATGGCTGGGCAACTGAGTTTTCTAAGTTTTGCCCAAGGCTAAGGGTTCTTAGCTATG
TTGGTGACAAAGAACGGAGAATGCAGATGCGCAAGTCCATATTTGAGCATGTGAGCCAACAGACATCTAGATCAGATCATGATCAACCTCTACCCTTTGATGTTTTCCTAACAACATATGACTTGGTAGTTTTGGATGCACACTTTCTTTCTCATATCCAATGGCGTTATACGATCATTGATGAAGCTCAACGAATCAAA
AACCCTTCGAGTGTAAGTAGGGATTTGACATTATTTCTGATTTACATGTCGAGTTTCAATGTAACCATGTATAGATTAGTAATATAATTTAA
>TRINITY_DN113040_c0_g4_i2 from sample A2 / Example unspliced isoform:GGGACAGGTAAGCAAGTGTCTTGGCATATAAATCTTGGGATAATTTATTCAACGAAGGACTGTGGAAAAATTGGGGGCGCTCATCATCAAGTTGAACAGGCAAAGAATTGAGTTGCAGAAAACAACATGTGAAGTGATCTGTACCATAAGCTATTTTTAGCCTCGGGAGACGTTAAAATATTTCCTTCCTTCCTGTTTCT
GTTCCTGTTGCGATGGTAACATTCCTGCACTTGATAACCTTGAAGCTTTTCTAGTCGCCACACCTCAACATTCACTCTTAATTTCACGGAGACACACAACCCACTCCACCATAGCTTCCCACTTAACCGACAAACTCCCATAAGAAGAAGAACAGGACGACTCGCTGATTTGAACAACCCAAATTTGGAGGTTAAGAAGG
AAAACAAAAATGGCGGCAGAGATGAATTACGAGCAGAGACTCATAGCAGCGGCACGGCTGGCCGACGACCTGGACACCACGGCTGCCAAAGAATTTGGCATTCCCAGCGCTGAAGAAGTCGCCGAGAAATGCTCAGAATGGGGAGTCACTGCACAGCTGAAGGCTCACCAGGCCCAAGGACTCTCATGGCTTATACGCCG
ATATGCCCGTGGCGTCAATGTTATACTCGGGGACGAGATGGGACTTGGGAAAACATTGCAGGCTATAAGTTTGTTGGCTTACTTGAAAGTTCAACGAAACTGCCCAGGGCCATTTTTGGTATTGTGTCCATTAAGCGTAACAGATGGCTGGGCAACTGAGTTTTCTAAGTTTTGCCCAAGGCTAAGGGTTCTTAGCTATG
TTGGTGACAAAGAACGGAGAATGCAGATGCGCAAGTCCATATTTGAGCATGTGAGCCAACAGACATCTAGATCAGATgtatgtgtctatgttgggtaaccttttaactctgtacctgtaagCATGATCAACCTCTACCCTTTGATGTTTTCCTAACAACATATGACTTGGTAGTTTTGGATGCACACTTTCTTTCTCATA
TCCAATGGCGTTATACGATCATTGATGAAGCTCAACGAATCAAAAACCCTTCGAGTGTCCTTTACACTACTCTTCAAGATCAATTTATGATTCCAAGACGGTTGTTACTGACAGGAACCCCAGTGCAAAACAATCTTTCTGAGCTTTGGGCTTTGTTACATTTTTGTATGCCTCATATTTTCGGTGAATTGAAGGATTTC
ATCACTACATTCAAGCAAGTTGCAACCATGACGCAAGGTGACAATACCTCTGGATATAGCAAACAGTTTAAGCTGCTAAGATATGTTGTGCATGCATTCATGATTCGGCGCACAAAAGCTTTACTTGTTAAGAATGGCACTCTGTCATTGCCACCACTGTCTGAGGCTACAGTACTGGCTCCATTGGTCCCACTTCAGAA
GAAAATTTATGGATCTGTATTGCATCAAGAGTTGCCCCAGCTTCTAACAAGTGGTTCAGGCACTTCTCAACACCAATCTTTGCAAAATATTGTGGTACAACTGCGAAAGGCATGTAGCCATCCTTACCTTTTCAATGGTGTGGAGCCAGAGCCATTTGAAGAAGGTGAACATTTGGTTCAGGCAAGTGGAAAGCTCATCA
TTCTGGACATTTTGCTTGAGAAGCTACATGGTCAAGGTCATCGTGTCTTGATTTTTGCTCAAATGACGCGTACAATAGACATTCTTCAGGATTACTTAGAACTGCGAAGGTATTCTTATGAGCGTCTTGATGGCTCAGTAAGAGCTGAGGAGCGTTTTGCAGCAGTGCAAAGCTTTAGTGGTAAAACATCAACATTGCAA
GAATCAAGT
Intron 2 GTCAGTCTTC ... ATTTTAATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 31.18 | 32 | 14 | 15 |
| A2 | 50 | 7 | 7 | 7 |
| A3 | 50 | 5 | 4 | 6 |
| A4 | 63.64 | 2 | 2 | 5 |
| A5 | 52.94 | 4 | 6 | 3 |
| A6 | 17.65 | 7 | 3 | 0 |
| A7 | 25.93 | 10 | 6 | 1 |
| A8 | 33.33 | 6 | 4 | 2 |
| A9 | 100 | 0 | 0 | 1 |
| A10 | 25 | 9 | 6 | 0 |
>TRINITY_DN113040_c0_g4_i2 from sample A2 / Example spliced isoformGGGACAGGTAAGCAAGTGTCTTGGCATATAAATCTTGGGATAATTTATTCAACGAAGGACTGTGGAAAAATTGGGGGCGCTCATCATCAAGTTGAACAGGCAAAGAATTGAGTTGCAGAAAACAACATGTGAAGTGATCTGTACCATAAGCTATTTTTAGCCTCGGGAGACGTTAAAATATTTCCTTCCTTCCTGTTTCT
GTTCCTGTTGCGATGGTAACATTCCTGCACTTGATAACCTTGAAGCTTTTCTAGTCGCCACACCTCAACATTCACTCTTAATTTCACGGAGACACACAACCCACTCCACCATAGCTTCCCACTTAACCGACAAACTCCCATAAGAAGAAGAACAGGACGACTCGCTGATTTGAACAACCCAAATTTGGAGGTTAAGAAGG
AAAACAAAAATGGCGGCAGAGATGAATTACGAGCAGAGACTCATAGCAGCGGCACGGCTGGCCGACGACCTGGACACCACGGCTGCCAAAGAATTTGGCATTCCCAGCGCTGAAGAAGTCGCCGAGAAATGCTCAGAATGGGGAGTCACTGCACAGCTGAAGGCTCACCAGGCCCAAGGACTCTCATGGCTTATACGCCG
ATATGCCCGTGGCGTCAATGTTATACTCGGGGACGAGATGGGACTTGGGAAAACATTGCAGGCTATAAGTTTGTTGGCTTACTTGAAAGTTCAACGAAACTGCCCAGGGCCATTTTTGGTATTGTGTCCATTAAGCGTAACAGATGGCTGGGCAACTGAGTTTTCTAAGTTTTGCCCAAGGCTAAGGGTTCTTAGCTATG
TTGGTGACAAAGAACGGAGAATGCAGATGCGCAAGTCCATATTTGAGCATGTGAGCCAACAGACATCTAGATCAGATGTATGTGTCTATGTTGGGTAACCTTTTAACTCTGTACCTGTAAGCATGATCAACCTCTACCCTTTGATGTTTTCCTAACAACATATGACTTGGTAGTTTTGGATGCACACTTTCTTTCTCATA
TCCAATGGCGTTATACGATCATTGATGAAGCTCAACGAATCAAAAACCCTTCGAGTGTCCTTTACACTACTCTTCAAGATCAATTTATGATTCCAAGACGGTTGTTACTGACAGGAACCCCAGTGCAAAACAATCTTTCTGAGCTTTGGGCTTTGTTACATTTTTGTATGCCTCATATTTTCGGTGAATTGAAGGATTTC
ATCACTACATTCAAGCAAGTTGCAACCATGACGCAAGGTGACAATACCTCTGGATATAGCAAACAGTTTAAGCTGCTAAGATATGTTGTGCATGCATTCATGATTCGGCGCACAAAAGCTTTACTTGTTAAGAATGGCACTCTGTCATTGCCACCACTGTCTGAGGCTACAGTACTGGCTCCATTGGTCCCACTTCAGAA
GAAAATTTATGGATCTGTATTGCATCAAGAGTTGCCCCAGCTTCTAACAAGTGGTTCAGGCACTTCTCAACACCAATCTTTGCAAAATATTGTGGTACAACTGCGAAAGGCATGTAGCCATCCTTACCTTTTCAATGGTGTGGAGCCAGAGCCATTTGAAGAAGGTGAACATTTGGTTCAGGCAAGTGGAAAGCTCATCA
TTCTGGACATTTTGCTTGAGAAGCTACATGGTCAAGGTCATCGTGTCTTGATTTTTGCTCAAATGACGCGTACAATAGACATTCTTCAGGATTACTTAGAACTGCGAAGGTATTCTTATGAGCGTCTTGATGGCTCAGTAAGAGCTGAGGAGCGTTTTGCAGCAGTGCAAAGCTTTAGTGGTAAAACATCAACATTGCAA
GAATCAAGT
>TRINITY_DN113040_c0_g4_i4 from sample A2 / Example unspliced isoform:CATTTTCATACGTTTTAGTTCATTGAGCAATCTAATGAATTGGGTATACCTGTTCGAAGTGGTTTGGTCTGCTAATTTTTAGTCTGCTGTAAATTAGACAAGTTACAAGCAAACATTGTGTTATTCTGTGCTATTTTATATATGATGAATAAGTTTTGAAGTCAATTTCCTGGAAAAATCTTGTGATATATTGTACTGAA
TTTTGTGCGTTGAAAATGTGAGTCTGTTTGGTAAGATAATGATGCTTTGTAGGGTATGCCGATTTTCTTTAATGTTCAAAGCACATCCATTTTGCAGGTGACAATACCTCTGGATATAGCAAACAGTTTAAGCTGCTAAGATATGTTGTGCATGCATTCATGATTCGGCGCACAAAAGCTTTACTTGTTAAGAATGGCAC
TCTGTCATTGCCACCACTGTCTGAGGCTACAGTgtcagtcttcaaactgaaaatgcttgtgaatatcttgaaacagtcgacctttgcccagcatttttagctttggagaataaatctaatattgttatttttatcattgcctaacaataatgtggtttcgtgcttcaaattttaatagACTGGCTCCATTGGTCCCACTT
CAGAAGAAAATTTATGGATCTGTATTGCATCAAGAGTTGCCCCAGCTTCTAACAAGTGGTTCAGGCACTTCTCAACACCAATCTTTGCAAAATATTGTGGTACAACTGCGAAAGGCATGTAGCCATCCTTACCTTTTCAATGGTGTGGAGCCAGAGCCATTTGAAGAAGGTGAACATTTGGTTCAGGCAAGTGGAAAGCT
CATCATTCTGGACATTTTGCTTGAGAAGCTACATGGTCAAGGTCATCGTGTCTTGATTTTTGCTCAAATGACGCGTACAATAGACATTCTTCAGGATTACTTAGAACTGCGAAGGTATTCTTATGAGCGTCTTGATGGCTCAGTAAGAGCTGAGGAGCGTTTTGCAGCAGTGCAAAGCTTTAGTGGTAAAACATCAACAT
TGCAAGAATCAAGT