sp|Q9M9H7|SOL1_ARATH ----> Carboxypeptidase SOL1

Intron 1 GTATCTGTCA ... CACGACTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	27.68	10.8	5.3	3
A2	48.15	10.6	9.6	10
A3	12.5	14	0	4
A4	48.79	3.8	4	3
A5	55.56	2	3	2
A6	35.18	7.1	0.8	7
A7	14.24	10.9	1.6	2
A8	40.4	5.5	3.5	4
A9	30	9.4	7.1	1
A10	38.23	11	8.6	5

>TRINITY_DN106492_c0_g1_i4 from sample A2 / Example spliced isoform

ACACTCCCGACAGGATTACCATCAGCACGAAAGATGAACACAGTTAGAACTCTGGTCCTGTTAGTTATCCTCCTGGGCTTAGCGGTCGGCCCTATGCTTGCACGAGGTAGAGGAGGAGAGCATGGATGTGGAACCCCCTCATCAGAAAGTATAGAAGCTTTCCATGGGCGATCTTTGTTGAGTAACATGACAAGGCAGCA
TCTAAATGAATTAGAACTGGGATATCATTATAGAACTAACTTGGAACTTGAAAGTGCAATGAAGAACTTTGCAAGGAAATGCAGCAACATTTCCAGGCTTTACAGAAAGTATAGAAGCTTTCCATGGGCGATCTTTGTTGAGTAACATGACAAGGCAGCATCTAAATGAATTAGAACTGGGATATCATTATAGAACTAAC
TTGGAACTTGAAAGTGCAATGAAGAACTTTGCAAGGAAATGCAGCAACATTTCCAGGCTTTACAGCATTGGGAACAGTGTCAACGGCACTCCATTGTGGGTGCTTGAGATTTCTGATAAACCTGGTCAAGAGGAACCAGAACCTGCATTTAAGTTTGTAGGAAATATGCATGGAGATGAACCTGTGGGTCGCGAATTACT
TTTATATCTTGCAGATTGGTTGTGCACAAATTACTTGAGGGATCCTTTGGTATCCCTGATTGTTGAAAAAGTTCATCTTCATCTGCTTCCATCGATGAATCCTGATGGCTTTGCTCTTAGGCAGCGTGGCAATGCAAACAATGTTGATTTGAATAGAGACTTCCCAGATCAATTCAGGACATTTGTATGAGGG

>TRINITY_DN106492_c0_g1_i5 from sample A2 / Example unspliced isoform:

ACACTCCCGACAGGATTACCATCAGCACGAAAGATGAACACAGTTAGAACTCTGGTCCTGTTAGTTATCCTCCTGGGCTTAGCGGTCGGCCCTATGCTTGCACGAGGTAGAGGAGGAGAGCATGGATGTGGAACCCCCTCATCAGAAAGTATAGAAGCTTTCCATGGGCGATCTTTGTTGAGTAACATGACAAGGCAGCA
TCTAAATGAATTAGAACTGGGATATCATTATAGAACTAACTTGGAACTTGAAAGTGCAATGAAGAACTTTGCAAGGAAATGCAGCAACATTTCCAGGCTTTACAGAAAGTATAGAAGCTTTCCATGGGCGATCTTTGTTGAGTAACATGACAAGGCAGCATCTAAATGAATTAGAACTGGGATATCATTATAGAACTAAC
TTGGAACTTGAAAGTGCAATGAAGAACTTTGCAAGGAAATGCAGCAACATTTCCAGGCTTTACAGgtatctgtcacttatttggtgtttcacacatagtagcaactagatgcataagctgaagcttgaactgaaaatatttcacctggcatcgtctttctctgaaatctgtagcaacgaactttgtgatgatattagaac
tgaatcaactgataatgacttttttccaatctgacacccacattttgttgtggggctagtctttgaagtttgtgctgattcatatcaattagctaaacaaaatctatccatctcaaccatatttatatcatttatatcacaatttaaactatgattgcatgcagttcagtagtataaattattcaatctcctatgtttgc
tgctttgaaaatttgggggatcaagaattaacactctcaatcctgttttagttgctgtcattgtgcactagcaatacaaaataaataatcagaataacatatgtttcttttgttatcatgtcttgatgtcgacattgctgcacgactcagCATTGGGAACAGTGTCAACGGCACTCCATTGTGGGTGCTTGAGATTTCTG
ATAAACCTGGTCAAGAGGAACCAGAACCTGCATTTAAGTTTGTAGGAAATATGCATGGAGATGAACCTGTGGGTCGCGAATTACTTTTATATCTTGCAGATTGGTTGTGCACAAATTACTTGAGGGATCCTTTGGTATCCCTGATTGTTGAAAAAGTTCATCTTCATCTGCTTCCATCGATGAATCCTGATGGCTTTGCT
CTTAGGCAGCGTGGCAATGCAAACAATGTTGATTTGAATAGAGACTTCCCAGATCAATTCAGGACATTTGTATGAGGG

Intron 2 GTAATATAAA ... ACATTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	27.78	13	0	5
A2	57.89	8	1	11
A3	41.67	7	5	5
A4	27.78	13	6	5
A5	16.67	5	2	1
A6	37.93	18	0	11
A7	26.32	14	3	5
A8	36.67	19	2	11
A9	28.57	15	0	6
A10	43.48	13	3	10

>TRINITY_DN96775_c0_g1_i9 from sample A4 / Example spliced isoform

ATTGTATGTCAAGCACATTGAATTTTCATCTTTCGCAATAACAAAACTGACTTTAATTTCTTGAGATATGGTGCATTAGAACTGGGATATCATTATAGAACTAACTTGGAACTTGAAAGTGCAATGAAGAACTTTGCAAGGAAATGCAGCAACATTTCCAGGCTTTACAGAGTTTGTAGGAAATATGCATGGAGATGAAC
CTGTGGGTCGCGAATTACTTTTATATCTTGCAGATTGGTTGTGCACAAATTACTTGAGGGATCCTTTGGTATCCCTGATTGTTGAAAAAGTTCATCTTCATCTGCTTCCATCGATGAATCCTGATGGCTTTGCTCTTAGGCAGCGTGGCAATGCAAACAATGTTGATTTGAATAGAGACTTCCCAGATCAATTCAGGACA
TTTGTATGAGGCAGTGAATGGTGCCTAACATAAGGAGCACTGTACAGTTTTTTCCTCAGAATAATGATGAGAACTTGCGGCAACCAGAAACAAAAGCAATCATGAAGTGGATAAAGGACAAACGATTTACTGCTTCTGCCAGTTTACATGGGGGTGCACTAGTTGCAAATTATCCTTGGGATGGCACTACTGATGGCAGG
GGTAGATATTCTCAATGTCCAGATGATGAAGCATTTCGTTACATGGCGACTATTTATAGTGACCACCATTATAATATGTCTAAAAGTAAAGAGTTCCATGGAGGCATTACAAATGGAGCACTCTGGTATCCTCTATATGGAGGGATGCAAGATTGGAACTATATATATGGAGGCTGCCTTGAATTGACACTGGAGATTAG
TGATGTGAAATGGCCTGCAGCAAAAGAGAAAGTATAGAAGCTTTCCATGGGCGATCTTTGTTGAGTAACATGACAAGGCAGCATCTAAATGAATTAGAACTGGGATATCATTATA

>TRINITY_DN96775_c0_g1_i11 from sample A4 / Example unspliced isoform:

GTATCCCTGATTGTTGAAAAAGTTCATCTTCATCTGCTTCCATCGATGAATCCTGATGGCTTTGCTCTTAGGCAGCGTGGCAATGCAAACAATGTTGATTTGAATAGAGACTTCCCAGATCAATTCAGGACATTTGTATGAGGCAGTGAATGGTGCCTAACATAAGGAGCACTGTACAGTTTTTTCCTCAGAATAATGAT
GAGAACTTGCGGCAACCAGAAACAAAAGCAATCATGAAGTGGATAAAGGACAAACGATTTACTGCTTCTGCCAGTTTACATGGGGGTGCACTAGTTGCAAATTATCCTTGGGATGGCACTACTGATGGCAGgtaatataaataaatgcatgatcattcttatttagaatgtttataaatgatacaaggtaaaattgcatt
ggcatgcacagttttcactttatctggcttgtattcactatcattatcgattactgatgacatttgcagGGGTAGATATTCTCAATGTCCAGATGATGAAGCATTTCGTTACATGGCGACTATTTATAGTGACCACCATTATAATATGTCTAAAAGTAAAGAGTTCCATGGAGGCATTACAAATGGAGCACTCTGGTATC
CTCTATATGGAGGGATGCAAGATTGGAACTATATATATGGAGGCTGCCTTGAATTGACACTGGAGATTAGTGATGTGAAATGGCCTGCAGCAAAAGAGATTCCTTTACTTTGGGAGCATAATCGAATGAGCATGTTGCAGCTGGTGGCAAGCCTTACAGGAGTACATGGAAGAGTCATATCATCATATTTGGGCCAATCA
TTACATGCATCTGTTCAGATTGCTGGCATTAACCATACTGTTATAGCTGGGGATCGCTTTGGTGATTACCACCGGATTCTTTTTCCAGGTCGCACTTACGAAGTCACAGCCAGTATACCTGGGTATTCTTCCAGGACTACTCATATCATGCTAGTAGAAGAGAAAGCTACATACGTTGATTTCATCTTAGA

Intron 3 GTATCCTTTT ... ATATTTCCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	60.2	6.3	7.8	2
A2	56.34	11.6	12.6	2.3
A3	59.6	10.8	13.6	4
A4	57.52	10.3	12.5	3
A5	70.83	2.4	4.8	0.7
A6	78.77	1.4	4.9	1.3
A7	45.08	10.5	6.4	0
A8	40.42	3.8	1.8	4
A9	48.14	12.9	9.5	0.7
A10	54.52	4	3.8	1.7

>TRINITY_DN115855_c0_g1_i8 from sample A1 / Example spliced isoform

TAGAACTCTGGTCCTGTTAGTTATCCTCCTGGGCTTAGCGGTCGGCCCTATGCTTGCACGAGGTAGAGGAGGAGAGCATGGATGTGGAACCCCCTCATCAGAAAGTATAGAAGCTTTCCATGGGCGATCTTTGTTGAGTAACATGACAAGGCAGCATCTAAATGAATTAGAACTGGGATATCATTATAGAACTAACTTGG
AACTTGAAAGTGCAATGAAGAACTTTGCAAGGAAATGCAGCAACATTTCCAGGCTTTACAGGTATCTGTCACTTATTTGGTGTTTCACACATAGTAGCAACTAGATGCATAAGCTGAAGCTTGAACTGAAAATATTTCACCTGGCATCGTCTTTCTCTGAAATCTGTAGCAACGAACTTTGTGATGATATTAGAACTGAA
TCAACTGATAATGACTTTTTTCCAATCTGACACCCACATTTTGTTGTGGGGCTAGTCTTTGAAGTTTGTGCTGATTCATATCAATTAGCTAAACAAAATCTATCCATCTCAACTATATTT

>TRINITY_DN115855_c0_g1_i13 from sample A1 / Example unspliced isoform:

TAGAACTCTGGTCCTGTTAGTTATCCTCCTGGGCTTAGCGGTCGGCCCTATGCTTGCACGAGGTAGAGGAGGAGAGCATGGATGTGGAACCCCCTCATCAGAAAGTATAGAAGCTTTCCATGGGCGATCTTTGTTGAGTAACATGACAAGGCAGCATCTAAATGAgtatcctttttgcttttgaaaaataaaatgctcaa
ttagtaactgtgaaaatacccagtgctttggtttctcacctttattgatgctttcatagcttcttattggcacttgtgtgatctaaaccctagaagttcttttattcattaacaatatttccagATTAGAACTGGGATATC

Intron 4 GTATCCCTGA ... AGCAAAAGAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	71.43	4	10	2
A2	100	0	8	0
A3	66.67	3	6	2
A4	50	4	4	3
A5	81.82	2	9	0
A6	95	1	19	1
A7	92.86	1	13	2
A8	100	0	18	7
A9	91.67	1	11	3
A10	100	0	8	3

>TRINITY_DN96775_c0_g1_i8 from sample A4 / Example spliced isoform

ACACTCCCGACAGGATTACCATCAGCACGAAAGATGAACACAGTTAGAACTCTGGTCCTGTTAGTTATCCTCCTGGGCTTAGCGGTCGGCCCTATGCTTGCACGAGGTAGAGGAGGAGAGCATGGATGTGGAACCCCCTCATCAGAAAGTATAGAAGCTTTCCATGGGCGATCTTTGTTGAGTAACATGACAAGGCAGCA
TCTAAATGAATTAGAACTGGGATATCATTATAGAACTAACTTGGAACTTGAAAGTGCAATGAAGAACTTTGCAAGGAAATGCAGCAACATTTCCAGGCTTTACAGCATTGGGAACAGTGTCAACGGCACTCCATTGTGGGTGCTTGAGATTTCTGATAAACCTGGTCAAGAGGAACCAGAACCTGCATTTAAGTTTGTAG
GAAATATGCATGGAGATGAACCTGTGGGTCGCGAATTACTTTTATATCTTGCAGATTGGTTGTGCACAAATTACTTGAGGGATCCTTTGAAAGTATAGAAGCTTTCCATGGGCGATCTTTGTTGAGTAACATGACAAGGCAGCATCTAAATGAATTAGAACTGGGATATCATTATA

>TRINITY_DN96775_c0_g1_i9 from sample A4 / Example unspliced isoform:

ATTGTATGTCAAGCACATTGAATTTTCATCTTTCGCAATAACAAAACTGACTTTAATTTCTTGAGATATGGTGCATTAGAACTGGGATATCATTATAGAACTAACTTGGAACTTGAAAGTGCAATGAAGAACTTTGCAAGGAAATGCAGCAACATTTCCAGGCTTTACAGAGTTTGTAGGAAATATGCATGGAGATGAAC
CTGTGGGTCGCGAATTACTTTTATATCTTGCAGATTGGTTGTGCACAAATTACTTGAGGGATCCTTTGgtatccctgattgttgaaaaagttcatcttcatctgcttccatcgatgaatcctgatggctttgctcttaggcagcgtggcaatgcaaacaatgttgatttgaatagagacttcccagatcaattcaggaca
tttgtatgaggcagtgaatggtgcctaacataaggagcactgtacagttttttcctcagaataatgatgagaacttgcggcaaccagaaacaaaagcaatcatgaagtggataaaggacaaacgatttactgcttctgccagtttacatgggggtgcactagttgcaaattatccttgggatggcactactgatggcagg
ggtagatattctcaatgtccagatgatgaagcatttcgttacatggcgactatttatagtgaccaccattataatatgtctaaaagtaaagagttccatggaggcattacaaatggagcactctggtatcctctatatggagggatgcaagattggaactatatatatggaggctgccttgaattgacactggagattag
tgatgtgaaatggcctgcagcaaaagagAAAGTATAGAAGCTTTCCATGGGCGATCTTTGTTGAGTAACATGACAAGGCAGCATCTAAATGAATTAGAACTGGGATATCATTATA