NA ----> NA
Intron 1 GTAAAGGAAA ... TTACATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 57.33 | 11 | 7.6 | 22 |
| A2 | 33.17 | 19.7 | 0.6 | 19 |
| A3 | 60.98 | 8 | 17 | 8 |
| A4 | 63.64 | 4 | 6 | 8 |
| A5 | 33.33 | 5 | 3 | 2 |
| A6 | 47.83 | 18 | 18 | 15 |
| A7 | 38.72 | 42.3 | 24.4 | 29 |
| A8 | 40.33 | 54 | 25 | 48 |
| A9 | 37.5 | 30 | 13 | 23 |
| A10 | 37.84 | 23 | 15 | 13 |
>TRINITY_DN128995_c9_g2_i1 from sample A1 / Example spliced isoformCAAACACGTCGCTGTCATTTCTGCAATTAATTATTATCTAGAAGGATGGTTAAAAGAAACCAACTTAAAGCTTGAAAATGGTTGCATATTAGTTATTCCGCCTTGAAAACATCAACCGCCCGCAACTATTGGAGAGAACACTGCAGAAAAAAAGGGCTTGTCGCTGTTGGTTAACTTGTCATCGTAATGGAGGAAAGGAT
CATGTGTTTGATGGTTCGCCAAGATCGCAGAGAACAACTTCTTGTTGCATTCAAATTCCTGAACGATCATATCTCCGAGATAATCTCACTGTTGCTCAAGAGTATGCGAGCTACGAGAAGATCGCCTTAATTCAGGAGGTAACTTGCTACGTTCAAGAACAGATTTGTTAAGAAGGAAGAGATCGTTGCACTAGAAATCT
TCAATGTCATTGAATCTCACTTGATCTCGAAGTAATATCCATCAAGATCGCTTCCAAGTTGCCAGTTTTAGATAAGAAAAGAACCCGAGACTTTTAATGAAAGGTTGTTAAAGAAATGTGATTATAGCCACATATCATCTTGATGAAATAGTTTAGTATATCGCCAGCCTAGACACGCAACATATTTTCATCTGAGCTAT
CGGCTCACATTTCTCTTGGTTCAATGAGTCATCACCAAATCGATTACCAGCATCAACTATCGAAATATAAGGAGGAGGATTCGACAATACTTTGAGTGAAAGATCGAGGTTCACTGGTAAATCCTGTGGCTTTCTTCGGAATTATTCTCTTGGAAATAATACATAGAAAGATGTCACGAAATCAATTGAAGTTGGATATA
GTTCAATCTGTTCGCCAGCAATGGATAACGTTACTCCACAATGCGAGCATATCTCAATCCTCGAGATGAAAGAGATAGAAACGCAGAAATCTACTCTTCGACGACCGGGTTCGTTGGAGAAATGGATGGATGTAACTATTATTTAGAAGTTTGTTATTAACATTCTGGGCTATAAAAGCAGAAAGAATTCGATTGAACCA
GAGGGGGCGTTCTCAGACCAGAGAATGATTTTTCTTTCTCTCTGCAACTCTTCTTTGGCTGGACAGATTTTTCTTTCAGAATTCAAAGAAACATACAGAGGAGGCGCTGTCATGAAAAGGAGGGCTCTGTAAAGAATATAGGGAACTTTTTTCTGATAAACTTTACTGTTTTCTCCTGTGGTTCGATTTCTGAGACATTA
GAGAGTCTATACTATACAATATCACATTTTATTATGTTTTACATTGGTGCTCTTCGAACTTCTTTGAGGATTATCGAGTGTTGCAGGATCTTAAAGACCTTAGCTAAGTCTTTAGAACATCTATACTGTGTTGCTGTGTTGC
>TRINITY_DN128995_c9_g2_i2 from sample A1 / Example unspliced isoform:CAAACACGTCGCTGTCATTTCTGCAATTAATTATTATCTAGAAGGATGGTTAAAAGAAACCAACTTAAAGCTTGAAAATGGTTGCATATTAGTTATTCCGCCTTGAAAACATCAACCGCCCGCAACTATTGGAGAGAACACTGCAGAAAAAAAGGGCTTGTCGCTGTTGGTTAACTTGTCATCGTAATGGAGGAAAGGAT
CATGTGTTTGATGGTTCGCCAAGATCGCAGAGAACAACTTCTTGTTGCATTCAAATTCCTGAACGATCATATCTCCGAGATAATCTCACTGTTGCTCAAGAGTATGCGAGCTACGAGAAGATCGCCTTAATTCAGGAGGTAACTTGCTACGTTCAAGAACAGATTTGTTAAGAAGGAAGAGATCGTTGCACTAGAAATCT
TCAATGTCATTGAATCTCACTTGATCTCGAAGTAATATCCATCAAGATCGCTTCCAAGTTGCCAGTTTTAGATAAGAAAAGAACCCGAGACTTTTAATGAAAGGTTGTTAAAGAAATGTGATTATAGCCACATATCATCTTGATGAAATAGTTTAGTATATCGCCAGCCTAGACACGCAACATATTTTCATCTGAGCTAT
CGGCTCACATTTCTCTTGGTTCAATGAGTCATCACCAAATCGATTACCAGCATCAACTATCGAAATATAAGGAGGAGGATTCGACAATACTTTGAGTGAAAGATCGAGgtaaaggaaatttacaagttcgctgcaaagaagcatatcattgagtaattgatacgtttgtcagcattcaaaacatctatgcctcagatcga
tcagttcatgtaaaagggaagttacttcatcttttaaccttccaaaataattgtctcttacgtattctcacaatttcatggactgatatttaatatatatgttacatgcagGTTCACTGGTAAATCCTGTGGCTTTCTTCGGAATTATTCTCTTGGAAATAATACATAGAAAGATGTCACGAAATCAATTGAAGTTGGAT
ATAGTTCAATCTGTTCGCCAGCAATGGATAACGTTACTCCACAATGCGAGCATATCTCAATCCTCGAGATGAAAGAGATAGAAACGCAGAAATCTACTCTTCGACGACCGGGTTCGTTGGAGAAATGGATGGATGTAACTATTATTTAGAAGTTTGTTATTAACATTCTGGGCTATAAAAGCAGAAAGAATTCGATTGAA
CCAGAGGGGGCGTTCTCAGACCAGAGAATGATTTTTCTTTCTCTCTGCAACTCTTCTTTGGCTGGACAGATTTTTCTTTCAGAATTCAAAGAAACATACAGAGGAGGCGCTGTCATGAAAAGGAGGGCTCTGTAAAGAATATAGGGAACTTTTTTCTGATAAACTTTACTGTTTTCTCCTGTGGTTCGATTTCTGAGACA
TTAGAGAGTCTATACTATACAATATCACATTTTATTATGTTTTACATTGGTGCTCTTCGAACTTCTTTGAGGATTATCGAGTGTTGCAGGATCTTAAAGACCTTAGCTAAGTCTTTAGAACATCTATACTGTGTTGCTGTGTTGC