sp|B5X574|PCKA2_ARATH ----> Phosphoenolpyruvate carboxykinase (ATP) 2
Intron 1 GTGAGTATTA ... ATTTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.95 | 181 | 1 | 57 |
| A2 | 24.46 | 105 | 3 | 34 |
| A3 | 18.38 | 151 | 0 | 34 |
| A4 | 21.23 | 115 | 0 | 31 |
| A5 | 21.54 | 51 | 0 | 14 |
| A6 | 17 | 332 | 0 | 68 |
| A7 | 17.74 | 385 | 0 | 83 |
| A8 | 15.19 | 363 | 0 | 65 |
| A9 | 15.48 | 344 | 0 | 63 |
| A10 | 16.85 | 296 | 0 | 60 |
>TRINITY_DN120603_c2_g3_i4 from sample A2 / Example spliced isoformGTGAGATGTATTTTTGATAAGCGTGGACGAAGTGTGGTGTGAGTATAGTTGTTTTCTGAAGATCAGGGAAAGCAGGGCAGCAGGGATGAGGAGCACACTTCTCAACCGCCTTCTGGCAGTCGGATTGCAGTCTTCAAGACAGGCCACTGCTGTCCGCCACAGCGCTCCATGGGCTCTGGCATCCAAACGGTTTGCAGCCA
CAGCAAGTTTAGCAGAAGAGGAAGGAGAACCGCTACCATTTCCAAGGGAGAGTCCAGGAGTTTCTTATGAGTTAAATTGGGCCCTTGCTTCTAAAAAAGTTTTCCCAAAAGAGGAAGCCCATCGCAACTTGAAAGATGCCGATTTAAAGAAGCATGGTGCAACTTCTGCAGAACCCACCACTGGAACTCCAGTATTTGCT
CGAGGAAGCTTCTCTTTAGGGGCATCTGCAATTTCCAAACCGCAATTCAACAAGCTTCTGAAACAGGTCACATCTCATCTTTCATCCATCCCAAAACTCTTTGTGCAAGATGGGGCTGTAGGTTCATCTCCAAAGAGTGATGCGAAAGTGCGATGTGTATGTGATAATCCTTCAGCTGCTTCATCTCTTCTCAGTATACT
GTGTCGAACTCCAACTCGAAACATTTCTCATGATGCCTTCCCTTTGACTGTTTACATTGCTTCAGGTGTAAGTCCAACTGCATGGGAGTATGTTGGGCTTGGGCCAAATGAAAATGGTGGATTTGTTGCAGTAGACTATGAACAATCAGCTTTGATCCTATGTGGAAAAGCTTTCTCAGATACTTCTGCGTTGAAGGGAG
CACTAAAAGCTGCAGCTGCACCAGCAATATCTGCACGCAGTTCCCTTCCCCTGCCTGCATGGCTTCTTGTACACGGAGAATCCATAGTTTTGTTATTTGCATCAGAAAAGACAGTTCAGAGTTCCCCAGCTCTGCATAAAGTCCTGGTTTCAAATGGGGCAGGTGTTGCTTTAGGTCCCGATGGAGTAGAAACAATTTTT
AAAAGTAAAGATTCTAAAGCACCAAACCTTTTCAAACTGCCATCTTCGATAATCATGCTTGTTGCTGACAGGTAAGTTAGGTGAAACACTATTTTGATTCATCTACAGGGGTCTTCCTAGTGTGTAGAGAAAAGAATGAAGTTGTTTGTTCTAATGAAATATAGATTAAGTGCATCTGTATATGCCAATGAATGGAGTTC
TATCTCTTTCTCTCTCCCTTTTTAATTTTTAACGTTCTTTTAAAAATTGTCACTTATTTTGGTTGGTTGTTAACAATCTTTTACTCATCATTCTCTTTTCTCATTTCCGAAAACAATTATAGCTAAGATGAATGGTTATTATTGTGTAT
>TRINITY_DN120603_c2_g3_i6 from sample A2 / Example unspliced isoform:GTTCCCTTCCCCTGCCTGCATGgtgagtattaagacatagctttaggggtattcatgaaaagtaaattttcagtattaaatgttcatgaaaacagtcttgattggagaataacatttttgcagGCTTCTTGTACACGGAGAATCCATAGTTTTGTTATTTGCATCAGAAAAGACAGTTCAGAGTTCCCCAGCTCTGCATA
AAGTCCTGGTTTCAAATGGGGCAGGTGTTGCTTTAGGTCCCGATGGAGTAGAAACAATTTTTAAAAGTAAAGATTCTAAAGCACCAAACCTTTTTCAAACTGCCATCTTCGATAATCATGCTTGCTGCTGACAGCTCAGGTGTTATTCCTTCTATATCTAAACTTACACCTGGTCAAGCTGCCTATCACTTTTTGGCTGG
CTACCAAAATGGAAACTTTGTGCCTGCATATGAGTCAGGTCCAATGTCTCTTGATCCTGTGGTAGTTGCCAAGGAGCTTTCCTCTCAGTTAACAAAAAATAACATTTCTTCCTTTCTAGCCAATGTTAATGTGGGGGAGAAGCATCTATCAGGTGAGGAGATCTTGAAATTGGTGGAAGCAACTCTTTCAGAGAAGTTAC
CATCAAGTAAAGGACCAAAGCCATCTAAAACTGCAGTGGATGGTTTGCAGGCCAAGTACGCAAATTTCATGTCAGGGAGGTTTCCCGATTTGCCAGAGGAAATTTCATTCGAATAATGTGCTGGACAATTGCTCTAAAAGATTGTTGTTTGTATTCACCTGTTTTGTGGGTGAATATGCAGTTTGAATCTACTAGAATCA
TTGGGATTGTACAGAATAAACTGTTAGCAATAATTACAACTATCAGTTGCCAATTATTCATTCCTCCTACTGATAACCAATACAGGACATCAATTTCACACCCAATTTGCTGACCAGCTTTATAGCTTTATTGCTTTGTTTTCATGCTCAAATGGCAATTATTATATATGAAGGGGAGATTATTGGTTTGTCTGAATGGC
AGGCTGAAGTCCTTCAAATTGGCACTACGTGCAGTTAAACAATAAGACCTAGGTGGTGCTATCTCTTTGACGACGAGAATGGACTTACAATATTTACACCAAGGTTGAATTGATCTCAATTCAAAAGTTCAAGCAGTACGCCTAGTTTATCTTTCTGATTTTATCTGTTCATTTCCTGTATTGGGACTGAGTTCAATGTT
TTCATGAGTACACCGCATTTAGTAAAAAATAATCCCTAGTGCTGCTATCTCTTTGATGAGGGGAATTGACCTTATGGTATTTACACCGAGATTGAATTTATTTCTACGTACTGGGACTAGTTTGTCTTTTTAAATTCTTTCATTCATTTCCACTATTAGGTCGGAGTTAGATGTTTTAATGAATAGCTTAACATATTGTG
TGAGACGTATTCAACATAAGTGAACCTTGTGAGTCTCAGCAGCTTGTTCAAAATATGATTGGTTACTTTTGACATTTTGGTACACAGTACACATTGTTCTGTCCATCCCCCAAATCCATATGAGAATGTATGATACAATTTTAATATAATTAAAATGTAGCAGTTCAATGGTGGCCACTAATGGTTAGTGGGAATATAAA
AAGTATAATGATGAGTAAGCATTGTGAGTACTCCCGGACAATGAGGGAAATAAAATATTAAAAGGAGAATGTTCCTGGCATTTGGGTATTCTGTTGGAGGTGGCATTTGGGTATTCTGTTGGAGGTGGCATTTGGGTATTCTGTTGGA
Intron 2 GTATTAATCT ... TATTTTCTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 49.64 | 69 | 68 | 12 |
| A2 | 54.37 | 47 | 56 | 12 |
| A3 | 49.02 | 52 | 50 | 7 |
| A4 | 51.02 | 48 | 50 | 2 |
| A5 | 51.16 | 21 | 22 | 3 |
| A6 | 50 | 64 | 64 | 0 |
| A7 | 49.57 | 116 | 114 | 0 |
| A8 | 50.53 | 94 | 96 | 0 |
| A9 | 50.22 | 114 | 115 | 0 |
| A10 | 51.05 | 116 | 121 | 2 |
>TRINITY_DN130950_c2_g1_i1 from sample A1 / Example spliced isoformGTTCTATACACACATATTTGGGAATATAAGCTATTTGCATGAAGCTGAAGGTGAGATGTATTTTTGATAAGCGTGGACGAAGTGTGGTGTGAGTATTGTTGTTTTCTGAAGATCAGGGAAAGCAGGGCAGCAGGGATGAGGAGCACACTTCTCAACCGCCTTCTGGCAGTCGGATTGCAGTCTTCAAGACAGGCCACTGC
TGTCCGCCACAGCGCTCCATGGGCTCTGGCATCCAAACGGTTTGCAGCCACAGCAAGTTTAGCAGAAGAGGAAGGAGAACCGCTACCATTTCCAAGGGAGAGTCCAGGAGTTTCTTATGAGTTAAATTGGGCCCTTGCTTCTAAAAAAGTTTTCCCAAAAGAGGAAGCCCATCGCAACTTGAAAGATGCCGATTTAAAGA
AGCATGGTGCAACTTCTGCAGAACCCACCACTGGAACTCCAGTATTTGCTCGAGGAAGCTTCTCTTTAGGGGCATCTGCAATTTCCAAACCACAATTCAACAAGCTTCTGAAACAGGAGCCCCAAATCAAGTATGCAAGGAAAGGTTGGGGATTTCTTCCTTTGATTGTAGTCAATGACTTGAGAAACTTCATGCCTTCA
GGTGTTTATTGGGGGAAATGATTTGTTGGATTTGACCTCATTGCATGGCATTAATGCCTTTAAGGCACATTGTCTATTGAGGATTGTGAAGCTTCATGATTTAAGCTAGGTAGTCAATCCAATCTCATGCACCTATCAGAATTAGTGCATTTACGGCAACAACTATGATGTATTTATCTTGCACCAAGTTAACTGATTAG
GGCAAATTAATCAATGA
>TRINITY_DN130950_c2_g1_i5 from sample A1 / Example unspliced isoform:GTTCTATACACACATATTTGGGAATATAAGCTATTTGCATGAAGCTGAAGGTGAGATGTATTTTTGATAAGCGTGGACGAAGTGTGGTGTGAGTATTGTTGTTTTCTGAAGATCAGGGAAAGCAGGGCAGCAGGGATGAGGAGCACACTTCTCAACCGCCTTCTGGCAGTCGGATTGCAGTCTTCAAGACAGGCCACTGC
TGTCCGCCACAGCGCTCCATGGGCTCTGGCATCCAAACGGTTTGCAGCCACAGCAAGTTTAGCAGAAGAGGAAGGAGAACCGCTACCATTTCCAAGGGAGAGTCCAGGAGTTTCTTATGAGTTAAATTGGGCCCTTGCTTCTAAAAAAGTTTTCCCAAAAGAGGAAGCCCATCGCAACTTGAAAGATGCCGATTTAAAGA
AGCATGGTGCAACTTCTGCAGAACCCACCACTGGAACTCCAGTATTTGCTCGAGGAAGCTTCTCTTTAGGGGCATCTGCAATTTCCAAACCACAATTCAACAAGCTTCTGAAACAGgtattaatctgatattcaaaaatgtcgaataccgattattatgcctggcacgactgaaatatgaactcaccttatctgctttta
ttaatttaattgagttttaatatttatgctgctttttgattcttcggcttgcatattttctagGAGCCCCAAATCAAGTATGCAAGGAAAGGTTGGGGATTTCTTCCTTTGATTGTAGTCAATGACTTGAGAAACTTCATGCCTTCAGGTGTTTATTGGGGGAAATGATTTGTTGGATTTGACCTCATTGCATGGCATTA
ATGCCTTTAAGGCACATTGTCTATTGAGGATTGTGAAGCTTCATGATTTAAGCTAGGTAGTCAATCCAATCTCATGCACCTATCAGAATTAGTGCATTTACGGCAACAACTATGATGTATTTATCTTGCACCAAGTTAACTGATTAGGGCAAATTAATCAATGA
Intron 3 GTCTTTTTTT ... GGCTGTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.98 | 213 | 50.7 | 60 |
| A2 | 24.98 | 186.2 | 38.3 | 62 |
| A3 | 23.63 | 250 | 55.3 | 77.3 |
| A4 | 27.09 | 148 | 28 | 55 |
| A5 | 24.87 | 99.7 | 25 | 33 |
| A6 | 21.55 | 273 | 57.7 | 75 |
| A7 | 22.45 | 580.3 | 120.7 | 168 |
| A8 | 26.05 | 264 | 35.3 | 93 |
| A9 | 25.08 | 454 | 92.7 | 152 |
| A10 | 25.23 | 512.7 | 106.7 | 173 |
>TRINITY_DN130950_c2_g1_i1 from sample A1 / Example spliced isoformGTTCTATACACACATATTTGGGAATATAAGCTATTTGCATGAAGCTGAAGGTGAGATGTATTTTTGATAAGCGTGGACGAAGTGTGGTGTGAGTATTGTTGTTTTCTGAAGATCAGGGAAAGCAGGGCAGCAGGGATGAGGAGCACACTTCTCAACCGCCTTCTGGCAGTCGGATTGCAGTCTTCAAGACAGGCCACTGC
TGTCCGCCACAGCGCTCCATGGGCTCTGGCATCCAAACGGTTTGCAGCCACAGCAAGTTTAGCAGAAGAGGAAGGAGAACCGCTACCATTTCCAAGGGAGAGTCCAGGAGTTTCTTATGAGTTAAATTGGGCCCTTGCTTCTAAAAAAGTTTTCCCAAAAGAGGAAGCCCATCGCAACTTGAAAGATGCCGATTTAAAGA
AGCATGGTGCAACTTCTGCAGAACCCACCACTGGAACTCCAGTATTTGCTCGAGGAAGCTTCTCTTTAGGGGCATCTGCAATTTCCAAACCACAATTCAACAAGCTTCTGAAACAGGAGCCCCAAATCAAGTATGCAAGGAAAGGTTGGGGATTTCTTCCTTTGATTGTAGTCAATGACTTGAGAAACTTCATGCCTTCA
GGTGTTTATTGGGGGAAATGATTTGTTGGATTTGACCTCATTGCATGGCATTAATGCCTTTAAGGCACATTGTCTATTGAGGATTGTGAAGCTTCATGATTTAAGCTAGGTAGTCAATCCAATCTCATGCACCTATCAGAATTAGTGCATTTACGGCAACAACTATGATGTATTTATCTTGCACCAAGTTAACTGATTAG
GGCAAATTAATCAATGA
>TRINITY_DN130950_c2_g1_i13 from sample A1 / Example unspliced isoform:GTTCTATACACACATATTTGGGAATATAAGCTATTTGCATGAAGCTGAAGGTGAGATGTATTTTTGATAAGCGTGGACGAAGTGTGGTGTGAGTATTGTTGTTTTCTGAAGATCAGGGAAAGCAGGGCAGCAGGGATGAGGAGCACACTTCTCAACCGCCTTCTGGCAGTCGGATTGCAGTCTTCAAGACAGGCCACTGC
TATCCGCCACGGCGCTCCATGGGCTCTGGCATCCAAACGGTTTGCAGCCACAGCAAGTTTAGCAGAAGAGGAAGGAGAACCGCTACCATTTCCAAGgtctttttttctccttgtcttattttcagtcagaaattaaaaacttgttttaggcattcttttaaaagctcaaattatgaactgaaagtgttgccatagaatgc
tcaaatgttaccatgctttcacaagttgccttttcagaaaaaatcttcacattcttggacctgcagattatgggaaaacaatgaacatgcgcactagaatttcattttggtatggcgaagattttgtttctctttagttttttttttgacttgcaagcttggctgtgaagGGAGAGTCCAGGAGTTTCTTATGAGTTAAA
TTGGGCCCTTGCTTCTAAAAAAGTTTTCCCAAAAGAGGAAGCCCATCGCAACTTGAAAGATGCCGATTTAAAGAAGCATGGTGCAACTTCTGCAGAACCCACCACTGGAACTCCAGTATTTGCTCGAGGAAGCTTCTCTTTAGGGGCATCTGCAATTTCCAAACCACAATTCAACAAGCTTCTGAAACAGGTCACATCTC
ATCTTTCATCCATCCCAAAACTCTTTGTGCAAGATGGGGCTGTAGGTTCATCTCCAAAGAGTGATGCGAAAGTGCGATGTGTATGTGATAATCCTTCAGCTGCTTCATCTCTTCTCAGTATACTGTGTCGAACTCCAACTCGAAACATTTCTCATGATGCCTTCCCTTTGACTGTTTACATTGCTTCAGGTGTAAGTCCA
ACTGCATGGGAGTATGTTGGGCTTGGGCCAAATGAAAATGGTGGATTTGTTGCAGTAGACTATGAACAATCAGCTTTGATCCTATGTGGAAAAGCTTTCTCAGATACTTCTGCGTTGAAGGGAGCACTAAAAGCTGCAGCTGCACCAGCAATATCTGCACGCAGTTCCCTTCCCCTGCCTGCATGGCTTCTTGTACACGG
AGAATCCATAGTTTTGTTATTTGCATCAGAAAAGACAGTTCAGAGTTCCCCAGCTCTGCATAAAGTCCTGGTTTCAAATGGGGCAGGTGTTGCTTTAGGTCCCGATGGAGTAGAAACAATTTTTAAAAGTAAAGATTCTAAAGCACCAAACCTTTTCAAACTGCCATCTTCGATAATCATGCTTGCTGCTGACAGCTCAG
GTGTTATTCCTTCTATATCTAAACTTACACCTGGTCAAGCTGCCTATCACTTTTTGGCTGGCTACCAAAATGGAAACTTTGTGCCTGCATATGAGTCAGGTCCAATGTCTCTTGATCCTGTGGTAGTTGCCAAGGAGCTTTCCTCTCAGTTAACAAAAAATAACATTTCTTCCTTTCTAGCCAATGTTAATGTGGGGGAG
AAGCATCTATCAGGTGAGGAGATCTTGAAATTGGTGGAAGCAACTCTTTCAGAGAAGTTACCATCAAGTAAAGGACCAAAGCCATCTAAAACTGCAGTGGATGGTTTGCAGGCCAAGTACGCAAATTTCATGTCAGGGAGGTTTCCCGATTTGCCAGAGGAAATTTCATTCTAATAACGTGCTGGACAATTGCTCTAAAA
GATTGTTGTTTGTATTCACCTGTTTTGTGGGTGAATATGCAGTTTGAATCTACTAGATCATTGGGATTGTACAGAATAAACTGTTAGCAATAATTACAACTATCAGTTGCCAATTATTCATTCCTCCTACTGATAACCAATACAGCACATCAATTTCACACCCAATTTGCTGACCAGCTTTATAGCTTTATTGCTTTGTT
TTCATGCTCAAATGGCAATTATTATATATGAAGGGGAGATTATTGGTTTGTCTGAATGGCAGGCTGAAGTCCTTCAAATTGGCACTACGTGCAGTTAAACAATAAGACCTAGGTGGTGCTATCTCTTTGACGACGAGAATGGACTTACAATATTTACACCAAGGTTGAATTGATCTCAATTCAAAAGTTCAAGCAGTACG
CCTAGTTTATCTTTCTGATTTTATCTGTTCATTTCCTGTATTGGGACTTAGTTCAATGTTTTCATGAGTACACTGCATTTAGTAAAAAATAATCCCTAGTGCTGCTATCTCTTTGATGAGGGGAATTGACCTTATGGTATTTACACCGAGATTGAATTTATTTCTACGTACTGGGACTAGTTTGTCTTTTTAAATTCTTT
CATTCATTTCCACTATTAGGTCGGAGTTAGATGTTTTAATGAATAGCTTAACATATTGTGTGAGACGTATTCAACATAAGTGAACCTTGTGAGTCTCAGCAGCTTGTTCAAAATATGATTGGTTACTTTTGACATTTTGGTACACAGTACACACTGTTCTGTCCATCCCCCAAATCCATATGAGAATGTATGATACAATT
TTAATATAATTAAAATGTAGCAGTTCAATGGTCGCCACTAATGGTTAGTGGGAATATAAAAAGTATAATGATGAGTAAGCATTGTGAGTACTCCCGGACAATGAGGGAAATAAAATATTAAAAGGAGAATGTTCCTGGCATTTGGTTATTCTGTTGGAGGTGGCATTTGGGTATTCTGTTGGAGGGTTTCCCCACAATTT
ATTTTCATTTTTTAAAAATCA
Intron 4 GTATGCTCTA ... GATTTGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.7 | 155 | 3 | 56 |
| A2 | 28.03 | 127.3 | 0 | 49 |
| A3 | 25.96 | 123.5 | 0 | 43 |
| A4 | 30.68 | 100 | 0 | 44 |
| A5 | 33.73 | 43.3 | 0 | 22 |
| A6 | 28.6 | 436 | 0 | 173 |
| A7 | 31.98 | 510 | 4 | 238 |
| A8 | 29.16 | 733.3 | 2 | 300 |
| A9 | 29.32 | 517 | 6 | 213 |
| A10 | 33.27 | 335.3 | 0 | 166 |
>TRINITY_DN43321_c1_g2_i5 from sample A8 / Example spliced isoformAAAAAAACAAAAAGAACAATAAGTTATAACACATACACAGTACACAAGATTTACCCTGGAAACCTTAACCAGGAAAACTAGCAAAAGCAAAGTCGCATCTCTGTTTTATTATATTAACAAAACAGTTCACCGTAGAATGTATAAGGATTCTGCAGCGTCAGTCAACCCTAATCCGCTAGGTGGTATTATATTACAATGGG
TATAAAACCATTGGCTGAAAACCATCCAAAACCCCCAGGCAAGGTTTCAACCCTGGACCCCACCATCGTGCTGGAATGCACAGTCTATCTGCGTGCAAAGAATACGACACATGTCCAACATTAAGATCATATGATTATGTTGCAGACATGCAAGTTCATTATTTGGGTTAATACACTAACAATGGACTTTATTGCAATCT
TCTAAAAAATGTTCAGATACTTTGACATTAGAGGTGGATTATTACTGGATGATGATGATGCTGATTTTTTGAAGTAGATATATTTAGATTTTCATTCCCTAGAAAAATTCTGTCTTCCATCGATGATTATACTTTTTTATTTTATTTTGGAATTACAGCTCAGGTGTTATTCCTTCTATATCTAAACTTACACCTGGTCA
AGCTGCCTATCACTTTTTGGCTGGCTACCAAAATGGAAACTTTGTGCCTGCATATGAGTCAGGTCCAATGTCTCTTGATCCTGTGGTAGTTGCCAAGGAGCTTTCCTCTCAGTTAACAAAAAATAACATTTCTTCCTTTCTAGCCAATGTTAATGTGGGGGAGAAGCATCTATCAGGTGAGGAGATCTTGAAATTGGTGG
AAGCAACTCTTTCAGAGAAGTTACCATCAAGTAAAGGACCAAAGCCATCTAAAACTGCAGTGGATGGTTTGCAGGCCAAGTACGCAAATTTCATGTCAGGGAGGTTTCCCGATTTGCCAGAGGAAATTTCATTCTAATAACGTGCTGGACAATTGCTCTAAAAGATTGTTGTTTGTATTCACCTGTTTTGTGGGTGAATA
TGCAGTTTGAATCTACTAGATCATTGGGATTGTACAGAATAAACTGTTAGCAATAATTACAACTATCAGTTGCCAATTATTCATTCCTCCTACTGATAACCAATACAGCACATCAATTTCACACCCAATTTGCTGACCAGCTTTATAGCTTTATTGCTTTGTTTTCATGCTCAAATGGAAATTATTATATATGAAGGGGA
GATTATTGGTTTGTCTGAATGGCAGGCTGAAGTCCTTCAAATTGGCACTACGTGCAGTTAAACAATAAGACCTAGGTGGTGCTATCTCTTTGACGACGAGAATGGACTTACAATATTTACACCAAGGTTGAATTGATCTCAATTCAAAAGTTCAAGCAGTACGCCTAGTTTATCTTTCTGATTTTATCTGTTCATTTCCA
GTATTGGGACTGAGTTCAATGTTTTCATGAATAGCCTAACATTGTGTGTGAGACTTATATAACAGAAGTGATAATATAGGTGAATATCCCTTCTGATCCCACCCTTTGTTAGTTTTACCCGCTTGTTCAAAATATGGTCAGTTATTATTGACATTTTGGTACACCGCATTTAGTTAAAAAATAATCCCTAGTGCTGCTAT
CTCTTTGATTAGGGG
>TRINITY_DN43321_c1_g2_i4 from sample A8 / Example unspliced isoform:ATCATATGATTATGTTGCAGACATGCAAGTTCATTATTTGGGTTAATACACTAACAATGGACTTTATTGCAATCTTCTAAAAAATGTTCAGATACTTTGACATTAGAGGTGGATTATTACTGGATGATGATGATGCTGATTTTTTGAAGTAGATATATTTAGATTTTCATTCCCTAGAAAAATTCTGTCTTCCATCGATG
ATTATACTTTTTTATTTTATTTTGGAATTACAGCTCAGGTGTTATTCCTTCTATATCTAAACTTACACCTGGTCAAGCTGCCTATCACTTTTTGGCTGGCTACCAAAATGGAAACTTTGTGCCTGCATATGAGTCAGGTCCAATGTCTCTTGATCCTGTGGTAGTTGCCAAGGAGCTTTCCTCTCAGGTAAGAATTTGTA
GTTCTATACCATTTTGTTTTTCACATATCTTAAGATTATTTTCTACTTCAAGATGTGTTTATATATTGTTGGCACAATTTAGGAATGAATCAGAATAATAACTTAAAAATATGGTTGCCGCCTGTTGCAGTTAACAAAAAATAACATTTCTTCCTTTCTAGCCAATGTTAATGTGGGGGAGAAGCATCTATCAGgtatgc
tctatttgatgtgttcaaccaaagagtgtaggaagatcattttgaaatttatctcctggcatgctggtgctctttttatttgttttttggagagtttcatgtctttcattagatgaagaggaaacaatatcgaatgattccatcatccatgataaaactattttgctgaaaattataatttctgttgttgttttgaatga
atgcactttactgtcggtgactgttagaatggatttcttaccatggaagtaaaaaatattttactttatatagtgtcattgaatttattttcttttgttcttaaggagtttattgaacattatgatgagcatttaatgatttgacagGTGAGGAGATCTTGAAATTGGTGGAAGCAACTCTTTCAGAGAAGTTACCATCA
AGTAAAGGACCAAAGCCATCTAAAACTGCAGTGGATGGTTTGCAGGCCAAGTACGCAAATTTCATGTCAGGGAGGTTTCCCGATTTGCCAGAGGAAATTTCATTCTAATAACGTGCTGGACAATTGCTCTAAAAGATTGTTGTTTGTATTCACCTGTTTTGTGGGTGAATATGCAGTTTGAATCTACTAGATCATTGGGA
TTGTACAGAATAAACTGTTAGCAATAATTACAACTATCAGTTGCCAATTATTCATTCCTCCTACTGATAACCAATACAGCACATCAATTTCACACCCAATTTGCTGACCAGCTTTATAGCTTTATTGCTTTGTTTTCATGCTCAAATGGAAATTATTATATATGAAGGGGAGATTATTGGTTTGTCTGAATGGCAGGCTG
AAGTCCTTCAAATTGGCACTACGTGCAGTTAAACAATAAGACCTAGGTGGTGCTATCTCTTTGACGACGAGAATGGACTTACAATATTTACACCAAGGTTGAATTGATCTCAATTCAAAAGTTCAAGCAGTACGCCTAGTTTATCTTTCTGATTTTATCTGTTCATTTCCAGTATTGGGACTGAGTTCAATGTTTTCATG
AATAGCCTAACATTGTGTGTGAGACTTATATAACAGAAGTGATAATATAGGTGAATATCCCTTCTGATCCCACCCTTTGTTAGTTTTACCCGCTTGTTCAAAATATGGTCAGTTATTATTGACATTTTGGTACACCGCATTTAGTTAAAAAATAATCCCTAGTGCTGCTATCTCTTTGATTAGGGG
Intron 5 GTCTTTTTTT ... GGCTGTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 24.06 | 213 | 75 | 60 |
| A2 | 24.24 | 186 | 57 | 62 |
| A3 | 24.13 | 250 | 82 | 77 |
| A4 | 24.68 | 148 | 42 | 55 |
| A5 | 25.93 | 100 | 37 | 33 |
| A6 | 22.77 | 273 | 86 | 75 |
| A7 | 23.13 | 580 | 181 | 168 |
| A8 | 21.66 | 264 | 53 | 93 |
| A9 | 24.27 | 454 | 139 | 152 |
| A10 | 24.5 | 513 | 160 | 173 |
>TRINITY_DN120603_c2_g3_i4 from sample A2 / Example spliced isoformGTGAGATGTATTTTTGATAAGCGTGGACGAAGTGTGGTGTGAGTATAGTTGTTTTCTGAAGATCAGGGAAAGCAGGGCAGCAGGGATGAGGAGCACACTTCTCAACCGCCTTCTGGCAGTCGGATTGCAGTCTTCAAGACAGGCCACTGCTGTCCGCCACAGCGCTCCATGGGCTCTGGCATCCAAACGGTTTGCAGCCA
CAGCAAGTTTAGCAGAAGAGGAAGGAGAACCGCTACCATTTCCAAGGGAGAGTCCAGGAGTTTCTTATGAGTTAAATTGGGCCCTTGCTTCTAAAAAAGTTTTCCCAAAAGAGGAAGCCCATCGCAACTTGAAAGATGCCGATTTAAAGAAGCATGGTGCAACTTCTGCAGAACCCACCACTGGAACTCCAGTATTTGCT
CGAGGAAGCTTCTCTTTAGGGGCATCTGCAATTTCCAAACCGCAATTCAACAAGCTTCTGAAACAGGTCACATCTCATCTTTCATCCATCCCAAAACTCTTTGTGCAAGATGGGGCTGTAGGTTCATCTCCAAAGAGTGATGCGAAAGTGCGATGTGTATGTGATAATCCTTCAGCTGCTTCATCTCTTCTCAGTATACT
GTGTCGAACTCCAACTCGAAACATTTCTCATGATGCCTTCCCTTTGACTGTTTACATTGCTTCAGGTGTAAGTCCAACTGCATGGGAGTATGTTGGGCTTGGGCCAAATGAAAATGGTGGATTTGTTGCAGTAGACTATGAACAATCAGCTTTGATCCTATGTGGAAAAGCTTTCTCAGATACTTCTGCGTTGAAGGGAG
CACTAAAAGCTGCAGCTGCACCAGCAATATCTGCACGCAGTTCCCTTCCCCTGCCTGCATGGCTTCTTGTACACGGAGAATCCATAGTTTTGTTATTTGCATCAGAAAAGACAGTTCAGAGTTCCCCAGCTCTGCATAAAGTCCTGGTTTCAAATGGGGCAGGTGTTGCTTTAGGTCCCGATGGAGTAGAAACAATTTTT
AAAAGTAAAGATTCTAAAGCACCAAACCTTTTCAAACTGCCATCTTCGATAATCATGCTTGTTGCTGACAGGTAAGTTAGGTGAAACACTATTTTGATTCATCTACAGGGGTCTTCCTAGTGTGTAGAGAAAAGAATGAAGTTGTTTGTTCTAATGAAATATAGATTAAGTGCATCTGTATATGCCAATGAATGGAGTTC
TATCTCTTTCTCTCTCCCTTTTTAATTTTTAACGTTCTTTTAAAAATTGTCACTTATTTTGGTTGGTTGTTAACAATCTTTTACTCATCATTCTCTTTTCTCATTTCCGAAAACAATTATAGCTAAGATGAATGGTTATTATTGTGTAT
>TRINITY_DN120603_c2_g3_i2 from sample A2 / Example unspliced isoform:GTGAGATGTATTTTTGATAAGCGTGGACGAAGTGTGGTGTGAGTATAGTTGTTTTCTGAAGATCAGGGAAAGCAGGGCAGCAGGGATGAGGAGCACACTTCTCAACCGCCTTCTGGCAGTCGGATTGCAGTCTTCAAGACAGGCCACTGCTATCCGCCACGGCGCTCCATGGGCTCTGGCATCCAAACGGTTTGCAGCCA
CAGCAAGTTTAGCAGAAGAGGAAGGAGAACCGCTACCATTTCCAAGgtctttttttctccttgtcttattttcagtcagaaattaaaaacttgttttaggcattcttttaaaagctcaaattatgaactgaaagtgttgccatagaatgctcaaatgttaccatgctttcacaaattgccttttcagaaaaaaatcttca
cattcttggacctgcagattatgggaaaacaatgaacatgcgcactagaatttcattttggtatggcgaagattttgtttctctttagttttttttttgacttgcaagcttggctgtgaagGGAGAGTCCAGGAGTTTCTTATGAGTTAAATTGGGCCCTTGCTTCTAAAAAAGTTTTCCCAAAAGAGGAAGCCCATCGC
AACTTGAAAGATGCCGATTTAAAGAAGCATGGTGCAACTTCTGCAGAACCCACCACTGGAACTCCAGTATTTGCTCGAGGAAGCTTCTCTTTAGGGGCATCTGCAATTTCCAAACCGCAATTCAACAAGCTTCTGAAACAGGTATTAATCTGATATTCAAAAATGTCGAATACCGATTATTATGCCTGGCACGACTGAAA
TATGAACTCACCTTATCTGCTTTTATTAATTTAATTGAGTTTTAATATTTATGCTGCTTTTTGATTCTTCGGCTTGCATATTTTCTAGGAGCCCCAAATCAAGTATGCAAGGAAAGGTTGGGGATTTCTTCCTTTGATTGTAGTCAATGACTTGAGAAACTTCATGCCTTCAGGTGTTTATTGGGGGAAATGATTTGTTG
GATTTGACCTCATTGCATGGCATTAATGCCTTTAAGGCACATTGTCTATTGAGGATTGTGAAGCTTCATGATTTAAGCTAGGTAGTCAATCCAATCTCATGCACCTATCAGAATTAGTGCATTTACGGCAACAACTATGATGTATTTATCTTGCACCAAGTTAACTGATTAGGGCAAATTAATCAATGAAGCTTATTAGA
TAAAAACA
Intron 6 GTAAGAATTT ... CCTGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.03 | 138 | 39 | 20 |
| A2 | 16.42 | 112 | 22 | 16.5 |
| A3 | 23.72 | 119 | 37 | 20.5 |
| A4 | 20.62 | 77 | 20 | 11.5 |
| A5 | 34.29 | 46 | 24 | 4.5 |
| A6 | 27.06 | 477 | 177 | 52.5 |
| A7 | 24.03 | 566 | 179 | 52.5 |
| A8 | 21.81 | 656 | 183 | 90.5 |
| A9 | 24.06 | 555.4 | 176 | 68.5 |
| A10 | 31.34 | 460 | 210 | 28.5 |
>TRINITY_DN45113_c0_g1_i7 from sample A7 / Example spliced isoformAGCGGCGATATTTGGGAATATAAGCTATTTGCATGAAGCTGAAGGTGAGATGTATTTTTGATAAGCGTGGACGAAGTGTGGTGTGAGTATAGTTGTTTTCTGAAGATCAGGGAAAGCAGGGCAGCAGGGATGAGGAGCACACTTCTCAACCGCCTTCTGGCAGTCGGATTGCAGTCTTCAAGACAGGCCACTGCTGTCCG
CCACAGCGCTCCATGGGCTCTGGCATCCAAACGGTTTGCAGCCACAGCAAGTTTAGCAGAAGAGGAAGGAGAACCGCTACCATTTCCAAGGGAGAGTCCAGGAGTTTCTTATGAGTTAAATTGGGCCCTTGCTTCTAAAAAAGTTTTCCCAAAAGAGGAAGCCCATCGCAACTTGAAAGATGCCGATTTAAAGAAGCATG
GTGCAACTTCTGCAGAACCCACCACTGGAACTCCAGTATTTGCTCGAGGAAGCTTCTCTTTAGGGGCATCTGCAATTTCCAAACCGCAATTCAACAAGCTTCTGAAACAGGAGCCCCAAATCAAGTATGCAAGGAAAGGTTCATCTCCAAAGAGTGATGCGAAAGTGCGATGTGTATGTGATAATCCTTCAGCTGCTTCA
TCTCTTCTCAGTATACTGTGTCGAACTCCAACTCGAAACATTTCTCATGATGCCTTCCCTTTGACTGTTTACATTGCTTCAGGTGTAAGTCCAACTGCATGGGAGTATGTTGGGCTTGGGCCAAATGAAAATGGTGGATTTGTTGCAGTAGACTATGAACAATCAGCTTTGATCCTATGTGGAAAAGCTTTCTCAGATAC
TTCTGCGTTGAAGGGAGCACTAAAAGCTGCAGCTGCACCAGCAATATCTGCACGCAGTTCCCTTCCCCTGCCTGCATGGCTTCTTGTACACGGAGAATCCATAGTTTTGTTATTTGCATCAGAAAAGACAGTTCAGAGTTCCCCAGCTCTGCATAAAGTCCTGGTTTCAAATGGGGCAGGTGTTGCTTTAGGTCCCGATG
GAGTAGAAACAATTTTTAAAAGTAAAGATTCTAAAGCACCAAACCTTTTCAAACTGCCATCTTCGATAATCATGCTTGCTGCTGACAGCTCAGGTGTTATTCCTTCTATATCTAAACTTACACCTGGTCAAGCTGCCTATCACTTTTTGGCTGGCTACCAAAATGGAAACTTTGTGCCTGCATATGAGTCAGGTCCAATG
TCTCTTGATCCTGTGGTAGTTGCCAAGGAGCTTTCCTCTCAGTTAACAAAAAATAACATTTCTTCCTTTCTAGCCAATGTTAATGTGGGGGAGAAGCATCTATCAGGTGAGGAGATCTTGAAATTGGTGGAAGCAACTCTTTCAGAGAAGTTACCATCAAGTAAAGGACCAAAGCCATCTAAAACTGCAGTGGATGGTTT
GCAGGCCAAGTACGCAAATTTCATGTCAGGGAGGTTTCCCGATTTGCCAGAGGAAATTTCATTCGAATAATGTGCTGGACAATTGCTCTAAAAGATTGTTGTTTGTATTCACCTGTTTTGTGGGTGAATATGCAGTTTGAATCTACTAGAATCATTGGGATTGTACAGAATAAACTGTTAGCAATAATTACAACTATCAG
TTGCCAATTATTCATTCCTCCTACTGATAACCAATACAGCACATCAATTTCACACCCAATTTGCTGACCAGCTTTATAGCTTTATTGCTTTGTTTTCATGCTCAAATGGCAATTATTATATATGAAGGGGAGATTATTGGTTTGTCTGAATGGCAGGCTGAAGTCCTTCAAATTGGCACTACGTGCAGTTAAACAATAAG
ACCTAGGTGGTGCTATCTCTTTGACGACGAGAATGGACTTACAATATTTACACCAAGGTTGAATTGATCTCAATTCAAAAGTTCAAGCAGTACGCCTAGTTTATCTTTCTGATTTTATCTGTTCATTTCCAGTAGTGGGACTGAGTTCAATGTTTTCATGAATAGCCTAACATTGTGTGTGAGACTTGTATAACAGAAGT
GATAATATAGGTGAATATCCCTTCTGATCCCACCCTTTGTTAGTTTTACCCGCTTGTTCAAAATATGGTCAGTTATTATTGACATTTTGGTACACCGCATTTAGTTAAAAAATAATCCCTAGTGCTGCTATCTCTTTGATTAGGGGAATTGACCTTATGATATTTACACCGAGATTGAATTTATTTCTACGTACTGGG
>TRINITY_DN45113_c0_g1_i6 from sample A7 / Example unspliced isoform:CTCAAACGCCCAAAAAAAATAAAAAACCAGTGAATAAAACAGGCTTCAAACCCACCAAAATCCAGAACCACAGAGATTCACAGCTCCCAGGTTCTGCCTCCATTCCTCAGGCTCCACTCCCATACGCATCCGCCTACGGCCCATCAGCAAAGGCAGTCCAGCCTCAATAAAGAGGGATATGACAGAGCTCCCTGCAGCGA
GCAGGAAGGCAGCGACTATAATGTGAGCAGCACCCAGAAGAGACAGCAAACCCTGTAAACAAAGAGCAGGAAACCGATCCTATCCACAAAATCCACAAACCAGAAACCGTACATATAAAAACAATGAATCCGGCTGTACATACAGTCCACATATATCCGAATACAGAAAGAAAACCTATAAACCCGTCCACCATGAATGG
CACAAGAAAATGCCATAGGTGAAAGAAAAACCCAAGTAAAGAACCGTCCCAGAAACCTTGAAATGTGAGCATTGCCACTAGCATCTGTAAAGAACCCCCGATCGCCGAAGACAATGCAGCCATGACAGCCCAAAGCCCAAAGGATGCAGCGCCCCATGGCGGCTGCCACCGAAAAGGCTGCCGAGCAAGATGACCGCCTA
CCCTCGACGCACCGTGGTTTAGGATACCCGTCGCACAGCGTTCGTAGCACCAACAGCATGAGGGAACTGGAGCCCTTGCTCTACAGCCCTCGCAGCCGCCCAAGTCTCTGCCGAACACGCCTCACCCTGGACCAGCATCCATCAAAACAAGCGCTACCGCCGCCGCCACTGCGTAGCCGAAACCAGCCCCCAATGGGTCG
CTGCGCCAAGTCAATACCAGTCACTCCAAGGTGGAACCCATCCGCCGGCCTATCATCATATGATTATGTTGCAGACATGCAAGTTCATTATTTGGGTTAATACACTAACAATGGACTTTATTGCAATCTTCTAAAAAATGTTCAGATACTTTGACATTAGAGGTGGATTGTTACTGGATGATGATGATGCTGATTTTTTG
AAGTAGATATATTTAGATTTTCATTCCCTAGAAAAATTCTGTCTTCCATCGATGATTATACTTTTTTATTTTATTTTGGAATTACAGCTCAGGTGTTATTCCTTCTATATCTAAACTTACACCTGGTCAAGCTGCCTATCACTTTTTGGCTGGCTACCAAAATGGAAACTTTGTGCCTGCATATGAGTCAGGTCCAATGT
CTCTTGATCCTGTGGTAGTTGCCAAGGAGCTTTCCTCTCAGgtaagaatttgtagttctataccattttgtttttcacatatcttaagattattttctacttcaagatgtgtttatatattgttggcacaatttaggaatgaatcagaataataacttaaaaatatggttgccgcctgttgcagTTAACAAAAAATAACA
TTTCTTCCTTTCTAGCCAATGTTAATGTGGGGGAGAAGCATCTATCAGGTATGCTCTATTTGATGTGTTCAACCAAAGAGTGTAGGAAGATCATTTTGAAATTTATCTCCTGGCATGCTGGTGCTCTTTTTATTTGTTTTTTGGAGAGTTTCATGTCTTTCATTAGATGAAGAGGAAACAATATCGAATGATTCCATCAT
CCATGATAAAACTATTTTGCTGAAAATTATAATTTCTGTTGTTGTTTTGAATGAATGCACTTTACTGTCGGTGACTGTTAGAATGGATTTCTTACCATGGAAGTAAAAAATATTTTACTTTATATAGTGTCATTGAATTTATTTTCTTTTGTTCTTAAG
Intron 7 GTCTTTTTTT ... GCCTTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 91.46 | 7 | 75 | 10 |
| A2 | 93.44 | 4 | 57 | 9 |
| A3 | 100 | 0 | 82 | 2 |
| A4 | 95.45 | 2 | 42 | 8 |
| A5 | 97.37 | 1 | 37 | 4 |
| A6 | 100 | 0 | 86 | 1 |
| A7 | 100 | 0 | 181 | 4 |
| A8 | 100 | 0 | 53 | 2 |
| A9 | 100 | 0 | 139 | 0 |
| A10 | 100 | 0 | 160 | 2 |
>TRINITY_DN120603_c2_g3_i8 from sample A2 / Example spliced isoformGGAGAACCGCTACCATTTCCAAGAAAAAAATCTTCACATTCTTGGACCTGCAGATTATGGGAAAACAATGAACATGCGCACTAGAATTTCATTTTGGTATGGCGAAGATTTTGTTTCTCTTTAGTTTTTTTTTTGACTTGCAAGCTTGGCTGTGAAGGGAGAGTCCAGGAGTTTCTTATGAGTTAAATTGGGCCCTTGCT
TCTAAAAAAGTTTTCCCAAAAGAGGAAGCCCATCGCAACTTGAAAGATGCCGATTTAAAGAAGCATGGTGCAACTTCTGCAGAACCCACCACTGGAACTCCAGTATTTGCTCGAGGAAGCTTCTCTTTAGGGGCATCTGCAATTTCCAAACCGCAATTCAACAAGCTTCTGAAACAGGTCACATCTCATCTTTCATCCAT
CCCAAAACTCTTTGTGCAAGATGGGGCTGTAGGTTCATCTCCAAAGAGTGATGCGAAAGTGCGATGTGTATGTGATAATCCTTCAGCTGCTTCATCTCTTCTCAGTATACTGTGTCGAACTCCAACTCGAAACATTTCTCATGATGCCTTCCCTTTGACTGTTTACATTGCTTCAGGTGTAAGTCCAACTGCATGGGAGT
ATGTTGGGCTTGGGCCAAATGAAAATGGTGGATTTGTTGCAGTAGACTATGAACAATCAGCTTTGATCCTATGTGGAAAAGCTTTCTCAGATACTTCTGCGTTGAAGGGAGCACTAAAAGCTGCAGCTGCACCAGCAATATCTGCACGCAGTTCCCTTCCCCTGCCTGCATGGCTTCTTGTACACGGAGAATCCATAGTT
TTGTTATTTGCATCAGAAAAGACAGTTCAGAGTTCCCCAGCTCTGCATAAAGTCCTGGTTTCAAATGGGGCAGGTGTTGCTTTAGGTCCCGATGGAGTAGAAACAATTTTTAAAAGTAAAGATTCTAAAGCACCAAACCTTTTCAAACTGCCATCTTCGATAATCATGCTTGCTGCTGACAGCTCAGGTGTTATTCCTTC
TATATCTAAACTTACACCTGGTCAAGCTGCCTATCACTTTTTGGCTGGCTACCAAAATGGAAACTTTGTGCCTGCATATGAGTCAGGTCCAATGTCTCTTGATCCTGTGGTAGTTGCCAAGGAGCTTTCCTCTCAGTTAACAAAAAATAACATTTCTTCCTTTCTAGCCAATGTTAATGTGGGGGAGAAGCATCTATCAG
GTGAGGAGATCTTGAAATTGGTGGAAGCAACTCTTTCAGAGAAGTTACCATCAAGTAAAGGACCAAAGCCATCTAAAACTGCAGTGGATGGTTTGCAGGCCAAGTACGCAAATTTCATGTCAGGGAGGTTTCCCGATTTGCCAGAGGAAATTTCATTCGAATAATGTGCTGGACAATTGCTCTAAAAGATTGTTGTTTGT
ATTCACCTGTTTTGTGGGTGAATATGCAGTTTGAATCTACTAGAATCATTGGGATTGTACAGAATAAACTGTTAGCAATAATTACAACTATCAGTTGCCAATTATTCATTCCTCCTACTGATAACCAATACAGGACATCAATTTCACACCCAATTTGCTGACCAGCTTTATAGCTTTATTGCTTTGTTTTCATGCTCAAA
TGGCAATTATTATATATGAAGGGGAGATTATTGGTTTGTCTGAATGGCAGGCTGAAGTCCTTCAAATTGGCACTACGTGCAGTTAAACAATAAGACCTAGGTGGTGCTATCTCTTTGACGACGAGAATGGACTTACAATATTTACACCAAGGTTGAATTGATCTCAATTCAAAAGTTCAAGCAGTACGCCTAGTTTATCT
TTCTGATTTTATCTGTTCATTTCCTGTATTGGGACTGAGTTCAATGTTTTCATGAGTACACCGCATTTAGTAAAAAATAATCCCTAGTGCTGCTATCTCTTTGATGAGGGGAATTGACCTTATGGTATTTACACCGAGATTGAATTTATTTCTACGTACTGGGACTAGTTTGTCTTTTTAAATTCTTTCATTCATTTCCA
CTATTAGGTCGGAGTTAGATGTTTTAATGAATAGCTTAACATATTGTGTGAGACGTATTCAACATAAGTGAACCTTGTGAGTCTCAGCAGCTTGTTCAAAATATGATTGGTTACTTTTGACATTTTGGTACACAGTACACATTGTTCTGTCCATCCCCCAAATCCATATGAGAATGTATGATACAATTTTAATATAATTA
AAATGTAGCAGTTCAATGGTGGCCACTAATGGTTAGTGGGAATATAAAAAGTATAATGATGAGTAAGCATTGTGAGTACTCCCGGACAATGAGGGAAATAAAATATTAAAAGGAGAATGTTCCTGGCATTTGGGTATTCTGTTGGAGGTGGCATTTGGGTATTCTGTTGGAGGTGGCATTTGGGTATTCTGTTGGA
>TRINITY_DN120603_c2_g3_i2 from sample A2 / Example unspliced isoform:GTGAGATGTATTTTTGATAAGCGTGGACGAAGTGTGGTGTGAGTATAGTTGTTTTCTGAAGATCAGGGAAAGCAGGGCAGCAGGGATGAGGAGCACACTTCTCAACCGCCTTCTGGCAGTCGGATTGCAGTCTTCAAGACAGGCCACTGCTATCCGCCACGGCGCTCCATGGGCTCTGGCATCCAAACGGTTTGCAGCCA
CAGCAAGTTTAGCAGAAGAGGAAGGAGAACCGCTACCATTTCCAAGgtctttttttctccttgtcttattttcagtcagaaattaaaaacttgttttaggcattcttttaaaagctcaaattatgaactgaaagtgttgccatagaatgctcaaatgttaccatgctttcacaaattgccttttcagAAAAAAATCTTCA
CATTCTTGGACCTGCAGATTATGGGAAAACAATGAACATGCGCACTAGAATTTCATTTTGGTATGGCGAAGATTTTGTTTCTCTTTAGTTTTTTTTTTGACTTGCAAGCTTGGCTGTGAAGGGAGAGTCCAGGAGTTTCTTATGAGTTAAATTGGGCCCTTGCTTCTAAAAAAGTTTTCCCAAAAGAGGAAGCCCATCGC
AACTTGAAAGATGCCGATTTAAAGAAGCATGGTGCAACTTCTGCAGAACCCACCACTGGAACTCCAGTATTTGCTCGAGGAAGCTTCTCTTTAGGGGCATCTGCAATTTCCAAACCGCAATTCAACAAGCTTCTGAAACAGGTATTAATCTGATATTCAAAAATGTCGAATACCGATTATTATGCCTGGCACGACTGAAA
TATGAACTCACCTTATCTGCTTTTATTAATTTAATTGAGTTTTAATATTTATGCTGCTTTTTGATTCTTCGGCTTGCATATTTTCTAGGAGCCCCAAATCAAGTATGCAAGGAAAGGTTGGGGATTTCTTCCTTTGATTGTAGTCAATGACTTGAGAAACTTCATGCCTTCAGGTGTTTATTGGGGGAAATGATTTGTTG
GATTTGACCTCATTGCATGGCATTAATGCCTTTAAGGCACATTGTCTATTGAGGATTGTGAAGCTTCATGATTTAAGCTAGGTAGTCAATCCAATCTCATGCACCTATCAGAATTAGTGCATTTACGGCAACAACTATGATGTATTTATCTTGCACCAAGTTAACTGATTAGGGCAAATTAATCAATGAAGCTTATTAGA
TAAAAACA