sp|Q9C810|Y1342_ARATH ----> PHD finger protein At1g33420
Intron 1 GTACACTGAA ... TTTCAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 35.14 | 12 | 5 | 8 |
| A2 | 56.52 | 5 | 4 | 9 |
| A3 | 31.34 | 23 | 7 | 14 |
| A4 | 23.4 | 18 | 2 | 9 |
| A5 | 52.94 | 4 | 2 | 7 |
| A6 | 42.86 | 4 | 1 | 5 |
| A7 | 24.32 | 14 | 7 | 2 |
| A8 | 12 | 11 | 3 | 0 |
| A9 | 24.44 | 17 | 2 | 9 |
| A10 | 25 | 9 | 2 | 4 |
>TRINITY_DN110546_c7_g1_i3 from sample A3 / Example spliced isoformGCAGACCATTATTTAGAGGCGGACGTGGGAAATTATATTGTTCTACACTTAATCGTTGTCTTGGCATCCGTTTGTTCTTCCTGCTGATGGAAGACACAGCTCAACCAAAAGACACGAGTCGAAAACAGGAATGGGAGAATCGCTGTTGCAGTGCAAGGAGGCGCAGATCGGAGCCGAAGAGATCATTGATTAGGCCGAAT
TGATCCTAACTAATCGAACTGGTGACCATTGGAACACCTGAGTTATGAAATCTGCAAAAAAAACAGTAATTTTGATGTGCTGAAAGCTCATTAACGTTATAGGGTTGCTGAGAAGCCACGAAGGGGCAGGGGCGCTCGAACTGATCCGAATCAATCGAAGTGGTAACCATTGGAACACCTGAGTTTTGAAATCTGCAAAA
AAAACAGTAATTTTGATGTACTGAAGGCTCATTAACGTTCTAGGGTTGCTGAAAAGCCATGAAGGGGCAGGGGCGCTCGCACAGGCCGTCGAGCTCCGAGCCCGACGACTGGGGCGACGGCTCGTGGATTGTGGACTGTGCTTGCGGGGTAAACTTTGACGATGGCGAAGAAATGGTTAGTTGCGACGAATGTGGGGTTT
GGGTTCACACGCGGTGCTCGCGGTTCGTGAAGGGGGAGACTTCGTTCGCCTGCGACAAGTGCAAGATCAAGAAGCGGAGGAAGGAAGAAGAGAGCGAGGAGACGGAGGTTGCACAGCTGCTGGCCGAGCTTCCCACTAAGACGATGAGGATGGAAAGCTGTCCGGCGCCCTCGTTCCGGATGGCGTCGGAGGTCCGGATG
GAAGATAGGGTTCATGTGCAGGGCATTCCGGGAGGCGATCCCGAGCTGTTTGAGGGTTTGCCCGCTTTTTACTCCCGTGAACTATGGAAATGCTCAGGCTATGTTCCTAAGAAGCTCAATTTTCAGTACAGAGAGTTTCCCTGCTGGGACGACAAGGAGAATATTGATGTGGTCCCCTTTTTGCAGTCCAAGATGCAGAT
TGGTGTTCATCGGCCTGTTGTTCTCGACGATGGTTCCAGGGGTTCGGAGGAGCCGGAGAGAGTAGCGGTATCAGAGGGCAGAGGGGCCGAGGATACCGAAAGAGAAATTCCAGTTTTGGCATCCTCGAAGGAAAAGCTAGTTCTTCATCAGGGTTCCCAGTCGCGGCGCGAGGATCGACATTCTTCGCCGAGAGGAGAAG
GTAGCAGACGATTGGAAGGAAAAGGTCACAAACATCAACATCATCATCATCACCATCACAGTCATCACCAGGGTAAGCGGAAGAAGGAAGAAGGGGGAGGCTCCAGAGATAATGCGGGCAAGAAGAGAGCGAAAACTAGCGGGGATAAGGACAGAGATGAGAATCTGAAGAAGAAAGGAAGTTCCTCCCAAGATGGCGGG
CATACATCAAGGAGTTTACGGTCAGCGCCGAAGAATCCGAAGTCTATGCGAAATCTTGCAGCACAGAGATTCCTGGATGATGGTTTAAAGGCTCACAGTGGATCCTGCAAGGTTGAGCCCATTGAACTTGCCTGCCATGATTCTTTATTTGGGGGCACTCATGACAAAACAGAGGTCCGTGATTGTGAAAACTCTGGTTC
TCTTGCTAAGGGTATAAGTTTGGACAAAAGAGAGATTAAAAATGAAGAATATAGAGGAAGGCTGTTGCAAGATACTGACCAAGATGGTGTATTCAAGAAACATGATACTCAAAGGAGCATGGAAAAATTGAAGTTAGCATCAGCCTCGAGGATTTATTCCACAGAAATACCAAGTGATAGTTTTATTTGCACCATGTCAT
CTGAACCACAATTGAAAAAGGATTGCCAAATTACTGGAAAAGCAGGGAAATTTTCACCTACTAGGGAGTCTATGAAATTTCATCTTGAAGCTTGTAAGATTGCAACAGCTCCAATTAAACAAGAGGATTTAAAAATTGCTGTAGAGGATGCTTCAATGTCAAATGCTGGGAAGTCTACTGTTGACTTCGAAAGTTCTGAG
GATCCAGTTGTCCATGCTGAACTTGCCTTCGATTCAGAATTTGCATCACCAAAATCTCTTTCTGGAAATTATCCTCATGGAGATGCTGTTCCATGCTTATCTATAACTTCCCCAGCTTTAAATGGGGGTGTTGCATCTGAATCTGCTATTACCTTACTGACAGTTAAAGGTGAGGTAAATGATGAGCCAGCCATATTGGA
TATCAAACCATTGCGATCCTCAAACTCCAATCTAACAAGAGAAAAATCACTTGGGGAGGGATGCAAACAACCACAGAAGGCCAGTGACCCATTTGCTTGCTTACAGCCCAGGCATTTGGCTGTTTCTGGCAACTGTTTATTCAAGCAAACAGCAAAACATTCAGGTCCAGTTGCAAAATCTAGGGCAGATGACTGCATGC
AATCACAGAAGCAACAAACATTGGCTCAAAATGAACCAGAAGATAATTGTCAGGTTGTCAAAGATACCGAGGATTTCCATGTAGAAAGCAGAGATAACATTTCTGGTATTGAACTGAAGAGTTTGCTAGCTGATCCAAAACAAATCTTAACAGAAGATTCACATTGTCAGGATGATGCTGTATCAGAAGAAAGACAATTG
AAATTGGAGCAATCATGTCATGGAGGTTTTGAACAGGCACAATCATCTTCCCAGCAGACCTCAATATTGCTGCAGGAAGCCCGCTTGCCACCAGCTCATCGTCCAAGGTTCAGCATGGGTTCATCGCTGTATACTGCCAGTGCTATAGCCTTATCAATGCAGGTTCCAAGCTCAAAGTCTCCAAATGGAGGCTCAAAATC
AAGTTCAGCGGCAGCTCATTTGCATAAGAATGGAGTTGAAGGTGTTGGTAGAACATCTGGCTCAAGTTCTGTTTCAAGACCACCTACATCTGGGCCCATTGCTGAGGGTAACAGTAAGTCATTTGGTCAAGGAACGAAGTCGTCAGTATATACGGTGTCATCTTCACCAGCCAGCAAGCCAGTTCATCCCTCGAAGCAGC
GCATTAGATCAGGTAATTCCACAGAAGTCATGAAAGATGATGCTGGGAATGCTGTTGGCAAAGGGTCAACCACAGGGAGCCCTGGCCGTGTTTCTCCAGAGATATCATCATCAAAATCTGTTGCAAAGGATAATGTAAAATGCTCGACAAATTCTACAGGGAAAACAGCACCACTTGGAAAATCTTGTTTCCCAGGTGGA
GCTTCAAAGCAGGCTGCTTCCAGTCCGAAAGGACACAGTTCGTGTCCATCTTCAAAGTCATCAGCAGGACAGAATGTACCTACTAATTATTCTAGTTCTACAGAGCACGTTGTTGCAACCCATCAGCAAACCTTATCAGTGCAGACAAAGCATGCTATAACAGGGACAGCTCACAAAAATGAAAAATCAAGTTTACTTGC
AGCCCAGTCTGTGCTGAAGGCTACTACTGCTATGCCATCTGCTCACTCTCAAGCTTCCAACAGTGTCCCTACAACCCTAAGTGATGAAGCGCTTGCCTTGTTGTTGCATCAGCAGCTCAACAGTTCCCCAAGAGTCCCTCGAGTACCACGTGTGCGACATGCTGGCAATATTCCTCAGTTGGCATCTTCCTCAACACCAT
CTTCAGGCACCAATGTTAAGAGACCAACTACAGTCACA
>TRINITY_DN110546_c7_g1_i4 from sample A3 / Example unspliced isoform:GCAGACCATTATTTAGAGGCGGACGTGGGAAATTATATTGTTCTACACTTAATCGTTGTCTTGGCATCCGTTTGTTCTTCCTGCTGATGGAAGACACAGCTCAACCAAAAGACACGAGTCGAAAACAGGAATGGGAGAATCGCTGTTGCAGTGCAAGGAGGCGCAGATCGGAGCCGAAGAGATCATTGATTAGGCCGAAT
TGATCCTAACTAATCGAACTGGTGACCATTGGAACACCTGAGTTATGAAATCTGCAAAAAAAACAGTAATTTTGATGTGCTGAAAGCTCATTAACGTTATAGGGTTGCTGAGAAGCCACGAAGGGGCAGGGGCGCTCGAACTGATCCGAATCAATCGAAGTGGTAACCATTGGAACACCTGAGTTTTGAAATCTGCAAAA
AAAACAGTAATTTTGATGTACTGAAGGCTCATTAACGTTCTAGGGTTGCTGAAAAGCCATGAAGGGGCAGGGGCGCTCGCACAGGCCGTCGAGCTCCGAGCCCGACGACTGGGGCGACGGCTCGTGGATTGTGGACTGTGCTTGCGGGGTAAACTTTGACGATGGCGAAGAAATGGTTAGTTGCGACGAATGTGGGGTTT
GGGTTCACACGCGGTGCTCGCGGTTCGTGAAGGGGGAGACTTCGTTCGCCTGCGACAAGTGCAAGATCAAGAAGCGGAGGAAGGAAGAAGAGAGCGAGGAGACGGAGGTTGCACAGCTGCTGGCCGAGCTTCCCACTAAGACGATGAGGATGGAAAGCTGTCCGGCGCCCTCGTTCCGGATGGCGTCGGAGGTCCGGATG
GAAGATAGGGTTCATGTGCAGGGCATTCCGGGAGGCGATCCCGAGCTGTTTGAGGGTTTGCCCGCTTTTTACTCCCGTGAACTATGGAAATGCTCAGGCTATGTTCCTAAGAAGCTCAATTTTCAGTACAGAGAGTTTCCCTGCTGGGACGACAAGGAGAATATTGATGTGGTCCCCTTTTTGCAGTCCAAGATGCAGAT
TGGTGTTCATCGGCCTGTTGTTCTCGACGATGGTTCCAGGGGTTCGGAGGAGCCGGAGAGAGTAGCGGTATCAGAGGGCAGAGGGGCCGAGGATACCGAAAGAGAAATTCCAGTTTTGGCATCCTCGAAGGAAAAGCTAGTTCTTCATCAGGGTTCCCAGTCGCGGCGCGAGGATCGACATTCTTCGCCGAGAGGAGAAG
GTAGCAGACGATTGGAAGGAAAAGGTCACAAACATCAACATCATCATCATCACCATCACAGTCATCACCAGGGTAAGCGGAAGAAGGAAGAAGGGGGAGGCTCCAGAGATAATGCGGGCAAGAAGAGAGCGAAAACTAGCGGGGATAAGGACAGAGATGAGAATCTGAAGAAGAAAGGAAGTTCCTCCCAAGATGGCGGG
CATACATCAAGGAGTTTACGGTCAGCGCCGAAGAATCCGAAGTCTATGCGAAATCTTGCAGCACAGAGATTCCTGGATGATGGTTTAAAGGCTCACAGTGGATCCTGCAAGGTTGAGCCCATTGAACTTGCCTGCCATGATTCTTTATTTGGGGGCACTCATGACAAAACAGAGGTCCGTGATTGTGAAAACTCTGGTTC
TCTTGCTAAGGGTATAAGTTTGGACAAAAGAGAGATTAAAAATGAAGAATATAGAGGAAGGCTGTTGCAAGATACTGACCAAGATGGTGTATTCAAGAAACATGATACTCAAAGGAGCATGGAAAAATTGAAGTTAGCATCAGCCTCGAGGATTTATTCCACAGAAATACCAAGTGATAGTTTTATTTGCACCATGTCAT
CTGAACCACAATTGAAAAAGGATTGCCAAATTACTGGAAAAGCAGGGAAATTTTCACCTACTAGGGAGTCTATGAAATTTCATCTTGAAGCTTGTAAGATTGCAACAGCTCCAATTAAACAAGAGGATTTAAAAATTGCTGTAGAGGATGCTTCAATGTCAAATGCTGGGAAGTCTACTGTTGACTTCGAAAGTTCTGAG
GATCCAGTTGTCCATGCTGAACTTGCCTTCGATTCAGAATTTGCATCACCAAAATCTCTTTCTGGAAATTATCCTCATGGAGATGCTGTTCCATGCTTATCTATAACTTCCCCAGCTTTAAATGGGGGTGTTGCATCTGAATCTGCTATTACCTTACTGACAGTTAAAGGTGAGGTAAATGATGAGCCAGCCATATTGGA
TATCAAACCATTGCGATCCTCAAACTCCAATCTAACAAGAGAAAAATCACTTGGGGAGGGATGCAAACAACCACAGAAGGCCAGTGACCCATTTGCTTGCTTACAGCCCAGGCATTTGGCTGTTTCTGGCAACTGTTTATTCAAGCAAACAGCAAAACATTCAGGTCCAGTTGCAAAATCTAGGGCAGATGACTGCATGC
AATCACAGAAGCAACAAACATTGGCTCAAAATGAACCAGAAGATAATTGTCAGGTTGTCAAAGATACCGAGGATTTCCATGTAGAAAGCAGAGATAACATTTCTGGTATTGAACTGAAGAGTTTGCTAGCTGATCCAAAACAAATCTTAACAGAAGATTCACATTGTCAGGATGATGCTGTATCAGAAGAAAGACAATTG
AAATTGGAGCAATCATGTCATGGAGGTTTTGAACAGGCACAATCATCTTCCCAGCAGACCTCAATATTGCTGCAGGAAGCCCGCTTGCCACCAGCTCATCGTCCAAGGTTCAGCATGGGTTCATCGCTGTATACTGCCAGTGCTATAGgtacactgaaggaagaaatattaggtggtgttaaatgcttatagtctagtat
gtttccagagattctgcttagtttttctatgcttataactgtatgttttcaaacagCCTTATCAATGCAGGTTCCAAGCTCAAAGTCTCCAAATGGAGGCTCAAAATCAAGTTCAGCGGCAGCTCATTTGCATAAGAATGGAGTTGAAGGTGTTGGTAGAACATCTGGCTCAAGTTCTGTTTCAAGACCACCTACATCTG
GGCCCATTGCTGAGGGTAACAGTAAGTCATTTGGTCAAGGAACGAAGTCGTCAGTATATACGGTGTCATCTTCACCAGCCAGCAAGCCAGTTCATCCCTCGAAGCAGCGCATTAGATCAGGTAATTCCACAGAAGTCATGAAAGATGATGCTGGGAATGCTGTTGGCAAAGGGTCAACCACAGGGAGCCCTGGCCGTGTT
TCTCCAGAGATATCATCATCAAAATCTGTTGCAAAGGATAATGTAAAATGCTCGACAAATTCTACAGGGAAAACAGCACCACTTGGAAAATCTTGTTTCCCAGGTGGAGCTTCAAAGCAGGCTGCTTCCAGTCCGAAAGGACACAGTTCGTGTCCATCTTCAAAGTCATCAGCAGGACAGAATGTACCTACTAATTATTC
TAGTTCTACAGAGCACGTTGTTGCAACCCATCAGCAAACCTTATCAGTGCAGACAAAGCATGCTATAACAGGGACAGCTCACAAAAATGAAAAATCAAGTTTACTTGCAGCCCAGTCTGTGCTGAAGGCTACTACTGCTATGCCATCTGCTCACTCTCAAGCTTCCAACAGTGTCCCTACAACCCTAAGTGATGAAGCGC
TTGCCTTGTTGTTGCATCAGCAGCTCAACAGTTCCCCAAGAGTCCCTCGAGTACCACGTGTGCGACATGCTGGCAATATTCCTCAGTTGGCATCTTCCTCAACACCATCTTCAGGCACCAATGTTAAGAGACCAACTACAGTCACA