NA ----> NA
Intron 1 GTATGTATCG ... TCATGTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 53.85 | 3 | 5 | 2 |
| A2 | 83.33 | 1 | 3 | 7 |
| A3 | 50 | 3 | 5 | 1 |
| A4 | 53.85 | 6 | 6 | 8 |
| A5 | 45.45 | 3 | 1 | 4 |
| A6 | 52.73 | 13 | 18 | 11 |
| A7 | 54.29 | 8 | 5 | 14 |
| A8 | 73.68 | 5 | 14 | 14 |
| A9 | 76.47 | 2 | 5 | 8 |
| A10 | 54.55 | 5 | 5 | 7 |
>TRINITY_DN83580_c0_g1_i1 from sample A4 / Example spliced isoformGGGCTTATAGTGGATGTCTTCAATGACCATGCTGTTATTGCATCTTCTGCAGCATGGGTCGAAAGGTATAGGTCTGTAATAGAGATTTTTATCAAGAAAATCCCTGAAATTGATTATGTGAAATGGAGACCCTCTGTTGAAATGTTGAAGGAGGAAGGATTAATTGTAGATCTCAAAGATTTTGAGCTAAAGCATGTAAA
AAGCAAAGTGAAGGTTATGGAGAATGGCGTTAATTACATTATTTCATTGGATGGTCAGAAGACAGGATTCTATGCAGATCAGCGTGACAATCGTCTTCTGGTGGGCTCACTTTCCAAAGGCAGAACAGTTCTTGATGTCTGCTGTTACAGTGGAGGTTTTGCACTTAATGCTGCTTTTGGAGGTGCTGTTCATGTTACTG
GTATTGATTCTTCGTTACCAGCTTTGGAACTTGCGGAGGAAAATGCCAAACTAAACAATATCAGCTCTAGCAGAATTTCTTTTCTAAAGGAAGATGCAACTAGGTTTATGAAAGCAGCAATTTCAGAAGAAAAATCTTGGGATTTGGTTATCTTGGATCCACCAAAATTAGCACCAAGCCGCAAGGTTTTGCAACGTGCA
ACTAGGGCAATGACACAAAGTGGGTCATTTCTAAGTATTTTGCAGAAAGCAGCTTCTTCAGTAGGTAAAAAAATTACAGTGCTTCGGCAAGTTGGAGCAGCTGCTGATCACCCTATTGATCCATCATATCCAGAAGGCGCATATCTTACCAACTTTCTACTTAGAATACTTTAACTGATTAAAGAAGAGGTCGTCCATGG
GGATGTGTTGCTCAAGGTGTTCTTCAGCGATG
>TRINITY_DN83580_c0_g1_i2 from sample A4 / Example unspliced isoform:GGGCTTATAGTGGATGTCTTCAATGACCATGCTGTTATTGCATCTTCTGCAGCATGGGTCGAAAGGTATAGGTCTGTAATAGAGATTTTTATCAAGAAAATCCCTGAAATTGATTATGTGAAATGGAGACCCTCTGTTGAAATGTTGAAGGAGGAAGGATTAATTGTAGATCTCAAAGATTTTGAGCTAAAGCATGTAAA
AAGCAAAGTGAAGGTTATGGAGAATGGCGTTAATTACATTATTTCATTGGATGGTCAGAAGACAGGATTCTATGCAGATCAGCGTGACAATCGTCTTCTGGTGGGCTCACTTTCCAAAGGCAGAACAGTTCTTGATGTCTGCTGTTACAGTGGAGGTTTTGCACTTAATGCTGCTTTTGGAGGTGCTGTTCATGTTACTG
GTATTGATTCTTCGTTACCAGCTTTGGAACTTGCGGAGGAAAATGCCAAACTAAACAATATCAGCTCTAGCAGAATTTCTTTTCTAAAGGAAGATGCAACTAGGTTTATGAAAGCAGCAATTTCAGAAGAAAAATCTTGGGATTTGGTTATCTTGGATCCACCAAAATTAGCACCAAGCCGCAAGGTTTTGCAACGTGCA
ACTAgtatgtatcgcaaccttaatgctcttgcaatgcaattgacaaagaaaggaggcttgcttatgacttgttcatgttcagGGGCAATGACACAAAGTGGGTCATTTCTAAGTATTTTGCAGAAAGCAGCTTCTTCAGTAGGTAAAAAAATTACAGTGCTTCGGCAAGTTGGAGCAGCTGCTGATCACCCTATTGATCC
ATCATATCCAGAAGGCGCATATCTTACCAACTTTCTACTTAGAATACTTTAACTGATTAAAGAAGAGGTCGTCCATGGGGATGTGTTGCTCAAGGTGTTCTTCAGCGATG