sp|Q9ASP6|HNRPQ_ARATH ----> Heterogeneous nuclear ribonucleoprotein Q
Intron 1 GTAGTAAAAA ... ATATTTCTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.03 | 132 | 40 | 39 |
| A2 | 20.14 | 115 | 32 | 26 |
| A3 | 17.24 | 132 | 32 | 23 |
| A4 | 23.49 | 114 | 43 | 27 |
| A5 | 22.37 | 59 | 10 | 24 |
| A6 | 19.41 | 220 | 59 | 47 |
| A7 | 21.55 | 253 | 79 | 60 |
| A8 | 20.1 | 159 | 45 | 35 |
| A9 | 21.46 | 183 | 55 | 45 |
| A10 | 22.52 | 203 | 62 | 56 |
>TRINITY_DN107262_c0_g3_i6 from sample A4 / Example spliced isoformATTTAGGACCAGGGTCTCGTGGAACTGAACTTTGACCCATAAAATCCTGTCCTCCTTTGAAGCGGGCTAAAATTCTCACGTCGGACCTTTATTGAAAAACACAAGTTCTCCAAGGCCTTCACTTGTATATCTAAGTCAAAAAAAGTAACGAATCGTTTGTATGAGTTTTCAAGCTTTTCATTTGTTCCTTAAACCCTAAG
ACTACCCTGCACAGCGGTTGCATCTCAGGATCTAGATTGGTTGTTCCCCTTTTATAGCGCCGTTGATATACAGAGCCTGCCTCTTTCCTTCGTTTTGTGGTGTTTTCATTTCCGTGCTTTCAAACTCCAGGAGGTCTGGTTTTCGATCTCCACAGCATCATTTGTTCTGCAACAATGCCTCCCCGTATTGTGAAAAAGAC
TGCCGTGACAACCCCTCTGAAAAAGACACCGGCTAAGGCTCCCAGCAAATCCCTTAAAACCCCGGCCAAGCCCGTGAGCTCTTCCCCACCGAAGGCAGAGCCCGAGGCTGTCGAGGATGCAGAGTCAAAGCCCTCGCCCACCGTTGAAGCTCCAAAAGCCGAAGAGAGAGTCATTGAGCCATTTCAAGATTTGAACGAAC
CAAGTGTCGAAGCCGAGCCGGAGAAAGAAATTCCCATAGAGGATGCCAACAAGGAGGACACAGAACCAACCAAGGATGCCGACAAGCCTTATGCAGAAGGGAAAGAGGAGGGCGTCAAGGGGATACAATTAGAGAACAAGGAAACCGATGTTATTATGCAAGAAGCACAGTATAATGAGTTTAAGGATAATGAACACCAG
GATGGACCGGCTGAGGTTAAGGATAAAGAACACCAGGATGGACCAGCTGAGGTTAAGGATAAAGAACACCAGGGTGGACCAGCTGAGCTTAAGGATAAAGAACACCAGGATGGACCGGCTGAAATTAATGTAGTCATTGGTGAGCAGAGCCAGGTTAAGAATAAAGAACACCAGGATGGACCGGCTGAAATTAATGTAGT
CATTGGTGAGCAGAGCCATGGAGATGAAGCTGGAGAAGGGGCAGGATGCCGTGAAGACGGTGTTGGAGGAGATGCAGCTGATGACCAACGTGATGTGGAAATGCCTTCCATGGTCAAAGAGCGGATAAAGCAGAAAGAGTTTGAAGTGTTTGTTGGTGGGCTTGATAAGGACGCCGATGAAGAGGATCTGAAGAAAGTGT
TTAGTGGGGTTGGTGAAGTTGTTGAGATCAGATTGGCGAAAAATCCTTTGACTCAGAAGAACAAGGGCTTTGGATTTGTTCGTTTCGCGACTGTGGAGCAAGCCAAAAAAGCTGTGGCAGAGCTTAAGAATCCACAGGTGAGAGGGAAGCAATGTGGAGTTACACGAAGCCAAGATAATGAAACTCTTCATGTACGCAAT
ATTTGTAAATCATGGACAAAAGAGACTCTTGAAAAGAAATTGACGGAATATGGAATAGACAATATTGAAGAAATAACTTTGATGGAGGATCCACAACAAGAAGGGACAAATAGGGGGTTTGCATTTTTGGAGTTCCCCACTCATCTTGAGGCTACAAATGCCTTCAAGCGCTTGCAGAAGAGAGACGTTTTCTTTGGTAT
TGACCTCTGTGCAAAGGTTGCGTTTGCCAAATCTGGCATTGAGCCAGACGAGGAAGTTATGGCGCAGGTTAAGTCTATTTTTGTTGATGGATTGCCACCTGCTTGGGATGAAGAGCAAGTTCAAGATAAATTTAAGAAGTATGGTGAAATTGAAAAAGTGCAGTTGGCACGAAATATGCCTACAGCTAAGCGAAAGGATT
TTGGTTTCATTTCCTTCACAACTCGTGAAGCGGCACTGGCTTGCATTGAAGGAGTAAATAAGAATGAGCTAAATGAAGAAGATAACAAGGTTACTCTGAAAGCTACTCTTCGAAAACCCCAGCAAAAGGGGCGATCGGTTAAGGATGGTGTTCGTGCAGGATATGGTGGTTTTCGAGGGGGTAGGGCCCCATGGGTTCGT
GGTATTGGTGATATCGAGCCTAGGAGGACGGGAGCACGTGATAGTCGATTTGGGGCTCATGAAGGAAGGCGGTCTTTTGAGGAAAGACGTCAACCTTTTGGAAGGGCATATGATAGGCGACCGCCTGGTCCTGCTTATGTACGAAGTGATTCTAGGAGGAATTATAGAGAAGATGATGCCTATCTTGATAGGCGAGATCG
ACCTTCAGGCAGATCTGTTGGAACAGTTACTAGGCGATCCTCATACAGGGATGATTATGGATATCATGGGGCTGGTTATACTGAGAGCATGCCTCCACGCAGGCCTGCGTATCCTGAGGATAGCTACAGTCATCGCATGAATGGAATGTCAACCTATAATGATGGACCTGTTCGTAATTACCCAGGAGTATCTGGGTCCA
AGCGCCCGTATTCAGATGTGGATGATGATGTTCCATACCCAGCTCGGCATTCCAGGAGCCGTTTGGATTATGATGCAGGGGCCGCAGATTCACGTTATGGAGGAGTGTCCAGGTTAGGACAAGATCAACAATCAGGTTACGGTGCAGGTGGCAGAGCTGGAGGAATATATTCAAATGACTACCTGCCTAGTGGCAATGAT
GTTGAAGGTGGAACATATCCACCTGTTACAAGTCGAAATGCGAGTGGGGGTTATGGACGTGGCAGTGGCTCAGCATCATACTATTGAAAAATTTTGGTACAGACTTTGATGGAAAAAAGCAGAACAGATTTAATCCAAGCACCGGGATAAAGTTGTTTAGGCTGGTTCTCTATGAAAACAAAATCCTTCTTTAAGTACAT
GTAACATTCGTTAAGTCACTAGTGGCTTGTTACTCTGCATAAGCTAGTAATTAGGGAAATATAAAAAATCCAGTGTTGATGGCGATATGATGTTCAAAGAGAATTTGGGTGTGTCAAACTGACATTATATGATGCCACAGCAAGCAAAGCTTATGTTATCTCCTATTGGAGGTTGGCAGAGTAGGAGAGAAGGTTACAAC
TTGTAGTAAATACATACTATTAACCAGTTCTGGATTTTTTCCCAGTTGAAGTAATAGGTTTTTAGGTTTAATGGCGGATTTGGGACTTTGTCTTCAGAAGAATGAAAACTCAACTAATTATTATAGGATGTTTCGGTAACTTGTTTGTTTCAATGATTAAGTGTTGCCCACAGTAGGGCCTGAAGAGACAATTCACGTTG
CATATCATTGATGTTCAGTTATTTGCTACAACATTGATATAGTATAATTTTGGTATTTGATGGAGCTTACTGAAGCCAGATGTTTTGAGTTCAAGTTTCTGTGAAGATAGAAAGGTGGACAAGTATACTGATATATGGGCTACCAATCATTTCAAACATGGCCAAAGTGTGGTTGATTCTTATTTATTTAATCAGCTCGG
CAGCATTTATGGATTTTGGCTTTACTGCTATTTTCTTTTGGACACTGTTAAGAAACAACTTTGTGGTAGATAAAAATATCAACATGAGGTATGTACATATGCACAATGAAATTGGTTTTCATCAACATTCAAGGATTTGTACTAAGATTTAAGAAGTGGGCAATTTTCTGAAGTGTTGTTAAACATGAGATACCTAAGAA
ATTTGGTATTATTGAGATTCTGTTAAAGAGTATTCCAACAACGATGACATTTGAGACAGAGGAGTGCATATACATTTCAATCATTGCATCACTGAATGAATTTAATGAAAAGTAAATGCTTGAGAGGTACATGCACACCTCCTTGTTCCAATATCAACATCTGCCTGGCGCCTTAGAAGAAAATATCCGAGTCTAACAAA
GGATGCATCTCAATAGTAATGAAGTAAATGGGGTGTATGTTCCTTTTTTGAACTGGCCAAATGTCTCAAGATTTACGTTGATTCAGAATTCACCTGGGTATAAACATGAGGTTTAGTGATACAGATTTCAAGTCGTTACTTTTGGCTATGAGCATTAGCTTTTTTTAATCAAATGAAGCAGCAGGAATGTATAAGATCTC
AAGGTTCCAGGTTTCTTTTAGTTAATATTTTTATCAGATCTCTCTTGGTATACGGGTGAGATTTAGTTGTCTTGGATAGCTTTATAGATATGCTAATCATGGTTTCTTCTAGTTTTGAAATAGGGTGCAAGAAAATACACATGCCATTGTGTTACCTATAAGAGGAATTATGAAACAAATTTCATTCTACTTGCAGTCAA
GGGCATAGGAGAATAAGCACATGCCAATCATTGCATGGTTTCGTTGCTGGAGTGTGTTTTTGCAGCTGAAGTATATTACATTGATAACAACTTGGTTGTGAACGAATTTTTATTTAGCATCAAATGTAATGATTGTTTGGTATTTCTTTCTTATCGATTTTCTCAGGAATATAATCATCGTGTTGTCTTGACTGCTACAT
TTATGCAAAGATATGATCTGGATACAGTTCAAGATGTCCCATTGCTGTTATGAACC
>TRINITY_DN107262_c0_g3_i2 from sample A4 / Example unspliced isoform:ATTTAGGACCAGGGTCTCGTGGAACTGAACTTTGACCCATAAAATCCTGTCCTCCTTTGAAGCGGGCTAAAATTCTCACGTCGGACCTTTATTGAAAAACACAAGTTCTCCAAGGCCTTCACTTGTATATCTAAGTCAAAAAAAGTAACGAATCGTTTGTATGAGTTTTCAAGCTTTTCATTTGTTCCTTAAACCCTAAG
ACTACCCTGCACAGCGGTTGCATCTCAGGATCTAGATTGGTTGTTCCCCTTTTATAGCGCCGTTGATATACAGAGCCTGCCTCTTTCCTTCGTTTTGTGGTGTTTTCATTTCCGTGCTTTCAAACTCCAGGAGGTCTGGTTTTCGATCTCCACAGCATCATTTGTTCTGCAACAATGCCTCCCCGTATTGTGAAAAAGAC
TGCCGTGACAACCCCTCTGAAAAAGACACCGGCTAAGGCTCCCAGCAAATCCCTTAAAACCCCGGCCAAGCCCGTGAGCTCTTCCCCACCGAAGGCAGAGCCCGAGGCTGTCGAGGATGCAGAGTCAAAGCCCTCGCCCACCGTTGAAGCTCCAAAAGCCGAAGAGAGAGTCATTGAGCCATTTCAAGATTTGAACGAAC
CAAGTGTCGAAGCCGAGCCGGAGAAAGAAATTCCCATAGAGGATGCCAACAAGGAGGACACAGAACCAACCAAGGATGCCGACAAGCCTTATGCAGAAGGGAAAGAGGAGGGCGTCAAGGGGATACAATTAGAGAACAAGGAAACCGATGTTATTATGCAAGAAGCACAGTATAATGAGTTTAAGGATAATGAACACCAG
GATGGACCGGCTGAGGTTAAGGATAAAGAACACCAGGATGGACCAGCTGAGGTTAAGGATAAAGAACACCAGGATGGACCGGCTGAAATTAATGTAGTCATTGGTGAGCAGAGCCAGGTTAAGAATAAAGAACACCAGGATGGACCGGCTGAAATTAATGTAGTCATTGGTGAGCAGAGCCATGGAGATGAAGCTGGAGA
AGGGGCAGGATGCCGTGAAGACGGTGTTGGAGGAGATGCAGCTGATGACCAACGTGATGTGGAAATGCCTTCCATGGTCAAAGAGCGGATAAAGCAGAAAGAGTTTGAAGTGTTTGTTGGTGGGCTTGATAAGGACGCCGATGAAGAGGATCTGAAGAAAGTGTTTAGTGGGGTTGGTGAAGTTGTTGAGATCAGATTGG
CGAAAAATCCTTTGACTCAGAAGAACAAGGGCTTTGGATTTGTTCGTTTCGCGACTGTGGAGCAAGCCAAAAAAGCTGTGGCAGAGCTTAAGAATCCACAGGTGAGAGGGAAGCAATGTGGAGTTACACGAAGCCAAGATAATGAAACTCTTCATGTACGCAATATTTGTAAATCATGGACAAAAGAGACTCTTGAAAAG
AAATTGACGGAATATGGAATAGACAATATTGAAGAAATAACTTTGATGGAGGATCCACAACAAGAAGGGACAAATAGGGGGTTTGCATTTTTGGAGTTCCCCACTCATCTTGAGGCTACAAATGCCTTCAAGCGCTTGCAGAAGAGAGACGTTTTCTTTGGTATTGACCTCTGTGCAAAGGTTGCGTTTGCCAAATCTGG
CATTGAGCCAGACGAGGAAGTTATGGCGCAGGTTAAGTCTATTTTTGTTGATGGATTGCCACCTGCTTGGGATGAAGAGCAAGTTCAAGATAAATTTAAGAAGTATGGTGAAATTGAAAAAGTGCAGTTGGCACGAAATATGCCTACAGCTAAGCGAAAGGATTTTGGTTTCATTTCCTTCACAACTCGTGAAGCGGCAC
TGGCTTGCATTGAAGGAGTAAATAAGAATGAGCTAAATGAAGAAGATAACAAGGTTACTCTGAAAGCTACTCTTCGAAAACCCCAGCAAAAGGGGCGATCGGTTAAGGATGGTGTTCGTGCAGGATATGGTGGTTTTCGAGGGGGTAGGGCCCCATGGGTTCGTGGTATTGGTGATATCGAGCCTAGGAGGACGGGAGCA
CGTGATAGTCGATTTGGGGCTCATGAAGGAAGGCGGTCTTTTGAGGAAAGACGTCAACCTTTTGGAAGGGCATATGATAGGCGACCGCCTGgtagtaaaaaatacctgttgaactgtttttgcctatgacttaaagtagactaacatgtaatttgacaacctatgatttatggtgcttaactctttgggtgttatatttc
tagGTCCTGCTTATGTACGAAGTGATTCTAGGAGGAATTATAGAGAAGATGATGCCTATCTTGATAGGCGAGATCGACCTTCAGGCAGATCTGTTGGAACAGTTACTAGGCGATCCTCATACAGGGATGATTATGGATATCATGGGGCTGGTTATACTGAGAGCATGCCTCCACGCAGGCCTGCGTATCCTGAGGATAGC
TACAGTCATCGCATGAATGGAATGTCAACCTATAATGATGGACCTGTTCGTAATTACCCAGGAGTATCTGGGTCCAAGCGCC
Intron 2 GTAAGTATTT ... TTGGCTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 9.23 | 142 | 15 | 2 |
| A2 | 7.82 | 139.3 | 12.1 | 2 |
| A3 | 2.92 | 118.8 | 3.7 | 0 |
| A4 | 9.01 | 87.6 | 9.1 | 6 |
| A5 | 5.73 | 71.5 | 4.8 | 2 |
| A6 | 3.3 | 399.6 | 15 | 0 |
| A7 | 4.38 | 380.8 | 18.6 | 5 |
| A8 | 4.74 | 394.5 | 21 | 0 |
| A9 | 3.35 | 214 | 8.2 | 0 |
| A10 | 4.45 | 278.8 | 14.3 | 0 |
>TRINITY_DN122390_c2_g3_i8 from sample A2 / Example spliced isoformCATTTGTTCCTTAAACCCTAAGACTACGCTGCACAGCGGTTGCATCTCAGGATCTAGATTGGTTGTTCCCCTTTTATAGCGCCGTTGATATACAGAGCCTGCCTCTTTCCTTCGTTTTGTGGTGTTTTCATTTCCGTGCTTTCAAACTCCAGGAGGTCTGGTTTTCGATCTCCACAGCATCATTTGTTCTGCAACAATGC
CTCCCCGTATTGTGAAAAAGACTGCCGTGACAACCCCTCTGAAAAAGACACCGGCTAAGGCTCCCAGCAAATCCCTTAAAACCCCGGCCAAGCCCGTGAGCTCTTCCCCACCGAAGGCAGAGCCCGAGGCCGTCGAGGATGCAGAGTCAAAGCCCTCGCCCACCGTTGAAGCTCCAAAAGCCGAAGAGAGAGTCATTGAG
CCATTTCAAGATTTGAATGAACCAAGTGTCGAAGCCGAGCCGGAGAAAGAAATTCCCATAGAGGATGCCAACAAGGAGGACACAGAACCAACCAAGGATGCCGACAAGCCTTATGCAGAAGGGAAAGAGGAGGGCGTCAAGGGGATACAATTAGAGAACAAGGAAACCGATGTTATTATGCAAGAAGCACAGTATAATGA
GTTTAAGGATAATGAACACCAGGATGGACCGGCTGAGGTTAAGGATAAAGAACACCAGGATGGACCAGCTGAGGTTAAGGATAAAGAACACCAGGGTGGACCAGCTGAGCTTAAGGATAAAGAACACCAGGATGGACCGGCTGAAAATAATGTAGTCATTGGTGAGCAGAGCCAGGTTAAGAATAAAGAACACCAGGATG
GACCGGCTGAAAATAATGTAGTCATTGGTGAGCAGAGCCATGGAGATGAAGCTGGAGAAGGGGCAGGATGCCGTGAAGACGGTGTTGGAGGAGATGCAGCTGATGACCAACGTGATGTGGAAATGCCTTCCATGGTCAAAGAGCGGATAAAGCAGAAAGAGTTTGAAGTGTTTGTTGGTGGGCTTGATAAGGACGCCGAT
GAAGAGGATCTGAAGAAAGTGTTTAGTGGGGTTGGTGAAGTTGTTGAGATCAGATTGGCGAAAAATCCTTTGACTCAGAAGAACAAGGGCTTTGGATTTGTTCGTTTCGCGACTGTGGAGCAAGCCAAAAAAGCTGTGGCAGAGCTTAAGAATCCACAGGTGAGAGGGAAGCAATGTGGAGTTACACGAAGCCAAGATAA
TGAAACTCTTCATGTACGCAATATTTGTAAATCATGGACAAAAGAGACTCTTGAAAAGAAATTGACGGAATATGGAATAGACAATATTGAAGAAATAACTTTGATGGAGGATCCACAACAAGAAGGGACAAATAGGGGGTTTGCATTTTTGGAGTTCCCCACTCATCTTGAGGCTACAAATGCCTTCAAGCGCTTGCAGA
AGAGAGACGTTTTCTTTGGTATTGACCTCTGTGCAAAGGTTGCGTTTGCCAAATCTGGCATTGAGCCAGACGAGGAAGTTATGGCGCAGGTTAAGTCTATTTTTGTTGATGGATTGCCACCTGCTTGGGATGAAGAGCAAGTTCAAGATAAATTTAAGAAGTATGGTGAAATTGAAAAAGTGCAGTTGGCACGAAATATG
CCTACAGCTAAGCGAAAGGATTTTGGATTCATTTCCTTCACAACTCGTGAAGCGGCACTGGCTTGCATTGAAGGAGTAAATAAGAATGAGCTAAATGAAGAAGATAACAAGGTTACTCTCAAAGCTACTCTTCGAAAACCCCAGCAAAAGGGGCGATCGGTTAAGGATGGTGTTCGTGCAGGATATGGTGGTTTTCGAGG
GGGTAGGGCCCCATGGGTTCGTGGTATTGGTGATATCGAGCCTAGGAGGACAGGAGCACGTGATAGTCGATTTGGGGCTCATGAAGGAAGGCGGTCTTTTGAGGAAAGACGTCAACCTTTTGGAAGGGCATATGATAGGCGACCGCCTGGTCCTGCTTATGTACGAAGTGATTCTAGGAGGAATTATAGAGAAGATGATG
CCTATCTTGATAGGCGAGATCGACCTTCAGGCAGATCTGTTGGAACAGTTACTAGGCGATCCTCATACAGGGATGATTATGGATATCATGGGGCTGGTTATACTGAGAGCATGCCTCCACGCAGGCCTGCGTATCCTGAGGATAGCTACAGTCATCGCATGAATGGAATGTCAACCTATAATGATGGACCTGTTCGTAAT
TACCCAGGAGTATCTGGGTCCAAGCGCCTGTATTCAGATGTGGATGATGATGTTCCATACCCAGCTCGGCATTCCAGGAGCCGTTTGGATTATGATGCAGGGGCCGCAGATTCACGTTATGGAGGAGTGTCCAGGTTAGGACAAGATCAACAATCAGGTTACGGTGCAGGTGGCAGAGCTGGAGGAATATATTCAAATGA
CTACCTGCCTAGTGGCAATGATGTTGAAGGTGGAACATATCCACCTGTTACAAGTCGAAATGCGAGTGGGGGTTATGGACGTGGCAGTGGCTCAGCATCATACTATTGAAAAGTAAGCTTTTTACCATTTTACCTTCAATGATCATTTTAAGGCAATTACAATAGGCGTTCAACAGTTCCTGCTTTTATATCGATTGTTA
TTTCTCGTGTCAAGTTATTTTGATTCCTTTGATTTAGTGGTGCTTAGTCTTTCCTTTCCTTCTTACATATCTTGATGTTACACAGATTTTGGTACAGACTTTGATGGAAAAAAGCAGAACAGATTTAATTCAAGCACTGGGATAAAGTTGTTTAGGCTGGT
>TRINITY_DN122390_c2_g3_i5 from sample A2 / Example unspliced isoform:CATTTGTTCCTTAAACCCTAAGACTACGCTGCACAGCGGTTGCATCTCAGGATCTAGATTGGTTGTTCCCCTTTTATAGCGCCGTTGATATACAGAGCCTGCCTCTTTCCTTCGTTTTGTGGTGTTTTCATTTCCGTGCTTTCAAACTCCAGGAGGTCTGGTTTTCGATCTCCACAGCATCATTTGTTCTGCAACAATGC
CTCCCCGTATTGTGAAAAAGACTGCCGTGACAACCCCTCTGAAAAAGACACCGGCTAAGGCTCCCAGCAAATCCCTTAAAACCCCGGCCAAGCCCGTGAGCTCTTCCCCACCGAAGGCAGAGCCCGAGGCCGTCGAGGATGCAGAGTCAAAGCCCTCGCCCACCGTTGAAGCTCCAAAAGCCGAAGAGAGAGTCATTGAG
CCATTTCAAGATTTGAATGAACCAAGTGTCGAAGCCGAGCCGGAGAAAGAAATTCCCATAGAGGATGCCAACAAGGAGGACACAGAACCAACCAAGGATGCCGACAAGCCTTATGCAGAAGGGAAAGAGGAGGGCGTCAAGGGGATACAATTAGAGAACAAGGAAACCGATGTTATTATGCAAGAAGCACAGTATAATGA
GTTTAAGGATAATGAACACCAGGATGGACCGGCTGAGGTTAAGGATAAAGAACACCAGGATGGACCAGCTGAGGTTAAGGATAAAGAACACCAGGGTGGACCAGCTGAGCTTAAGGATAAAGAACACCAGGATGGACCGGCTGAAAATAATGTAGTCATTGGTGAGCAGAGCCAGGTTAAGAATAAAGAACACCAGGATG
GACCGGCTGAAAATAATGTAGTCATTGGTGAGCAGAGCCATGGAGATGAAGCTGGAGAAGGGGCAGGATGCCGTGAAGACGGTGTTGGAGGAGATGCAGCTGATGACCAACGTGATGTGGAAATGCCTTCCATGGTCAAAGAGCGGATAAAGCAGAAAGAGTTTGAAGTGTTTGTTGGTGGGCTTGATAAGGACGCCGAT
GAAGAGGATCTGAAGAAAGTGTTTAGTGGGGTTGGTGAAGTTGTTGAGATCAGATTGGCGAAAAATCCTTTGACTCAGAAGAACAAGGGCTTTGGATTTGTTCGTTTCGCGACTGTGGAGCAAGCCAAAAAAGCTGTGGCAGAGCTTAAGAATCCACAGGTGAGAGGGAAGCAATGTGGAGTTACACGAAGCCAAGATAA
TGAAACTCTTCATGTACGCAATATTTGTAAATCATGGACAAAAGAGACTCTTGAAAAGAAATTGACGGAATATGGAATAGACAATATTGAAGAAATAACTTTGATGGAGGATCCACAACAAGAAGGGACAAATAGGGGGTTTGCATTTTTGGAGTTCCCCACTCATCTTGAGGCTACAAATGCCTTCAAGCGCTTGCAGA
AGAGAGACGTTTTCTTTGGTATTGACCTCTGTGCAAAGGTTGCGTTTGCCAAATCTGGCATTGAGCCAGACGAGGAAGTTATGGCGCAGGTTAAGTCTATTTTTGTTGATGGATTGCCACCTGCTTGGGATGAAGAGCAAGTTCAAGATAAATTTAAGAAGTATGGTGAAATTGAAAAAGTGCAGTTGGCACGAAATATG
CCTACAGCTAAGCGAAAGGATTTTGGATTCATTTCCTTCACAACTCGTGAAGCGGCACTGGCTTGCATTGAAGGAGTAAATAAGAATGAGCTAAATGAAGAAGATAACAAGGTTACTCTCAAAGCTACTCTTCGAAAACCCCAGCAAAAGGGGCGATCGGTTAAGGATGGTGTTCGTGCAGGATATGGTGGTTTTCGAGG
GGGTAGGGCCCCATGGGTTCGTGGTATTGGTGATATCGAGCCTAGGAGGACAGGAGCACGTGATAGTCGATTTGGGGCTCATGAAGGAAGGCGGTCTTTTGAGGAAAGACGTCAACCTTTTGGAAGGGCATATGATAGGCGACCGCCTGGTCCTGCTTATGTACGAAGTGATTCTAGGAGGAATTATAGAGAAGATGATG
CCTATCTTGATAGGCGAGATCGACCTTCAGGCAGATCTGTTGGAACAGTTACTAGGCGATCCTCATACAGGGATGATTATGGATATCATGGGGCTGGTTATACTGAGAGCATGCCTCCACGCAGGCCTGCGTATCCTGAGGATAGCTACAGTCATCGCATGAATGGAATGTCAACCTATAATGATGGACCTGTTCGTAAT
TACCCAGGAGTATCTGGGTCCAAGCGCCTGTATTCAGATGTGGATGATGATGTTCCATACCCAGCTCGGCATTCCAGGAGCCGTTTGGATTATGATGCAGGGGCCGCAGATTCACGTTATGGAGGAGTGTCCAGGTTAGGACAAGATCAACAATCAGGTTACGGTGCAGGTGGCAGAGCTGGAGGAATATATTCAAATGA
CTACCTGCCTAGTGGCAATGATgtaagtatttcctatgagtcatgaaattaagtttgagaatgcaatctgttctattctttcaaacatttatctttggctacagGTTGAAGGTGGAACATATCCACCTGTTACAAGTCGAAATGCGAGTGGGGGTTATGGACGTGGCAGTGGCTCAGCATCATACTATTGAAAA
Intron 3 GTAAGCTTTT ... TGTTACACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 31.67 | 82 | 38 | 28.7 |
| A2 | 37.41 | 87 | 52 | 14.6 |
| A3 | 29.17 | 68 | 28 | 12.6 |
| A4 | 32.99 | 65 | 32 | 18.8 |
| A5 | 35.42 | 31 | 17 | 4.4 |
| A6 | 30.77 | 288 | 128 | 33.6 |
| A7 | 29.94 | 241 | 103 | 30.2 |
| A8 | 28.82 | 331 | 134 | 59.6 |
| A9 | 28.84 | 153 | 62 | 33.8 |
| A10 | 26.15 | 144 | 51 | 28.6 |
>TRINITY_DN132954_c3_g1_i2 from sample A1 / Example spliced isoformGTAGTCATTGGTGAGCAGAGCCAGGTTAAGAATAAAGAACACCAGGATGGACCGGCTGAAATTAATGTAGTCATTGGTGAGCAGAGCCAGGTTAAGAATAAAGAACACCAGGATGGACCGGCTGAAATTAATGTAGTCATTGGTGAGCAGAGCCATGGAGATGAAGCTGGAGAAGGGGCAGGATGCCGTGAAGACGGTGT
TGGAGGAGATGCAGCTGATGACCAACGTGATGTGGAAATGCCTTCCATGGTCAAAGAGCGGATAAAGCAGAAAGAGTTTGAAGTGTTTGTTGGTGGGCTTGATAAGGACGCCGATGAAGAGGATCTGAAGAAAGTGTTTAGTGGGGTTGGTGAAGTTGTTGAGATCAGATTGGCGAAAAATCCTTTGACTCAGAAGAACA
AGGGCTTTGGATTTGTTCGTTTCGCGACTGTGGAGCAAGCCAAAAAAGCTGTGGCAGAGCTTAAGAATCCACAGGTGAGAGGGAAGCAATGTGGAGTTACACGAAGCCAAGATAATGAAACTCTTCATGTACGCAATATTTGTAAATCATGGACAAAAGAGACTCTTGAAAAGAAATTGACGGAATATGGAATAGACAAT
ATTGAAGAAATAACTTTGATGGAGGATCCACAACAAGAAGGGACAAATAGGGGGTTTGCATTTTTGGAGTTCCCCACTCATCTTGAGGCTACAAATGCCTTCAAGCGCTTGCAGAAGAGAGACGTTTTCTTTGGTATTGACCTCTGTGCAAAGGTTGCGTTTGCCAAATCTGGCATTGAGCCAGACGAGGAAGTTATGGC
GCAGGTTAAGTCTATTTTTGTTGATGGATTGCCACCTGCTTGGGATGAAGAGCAAGTTCAAGATAAATTTAAGAAGTATGGTGAAATTGAAAAAGTGCAGTTGGCACGAAATATGCCTACAGCTAAGCGAAAGGATTTTGGTTTCATTTCCTTCACAACTCGTGAAGCGGCACTGGCTTGCATTGAAGGAGTAAATAAGA
ATGAGCTAAATGAAGAAGATAACAAGGTTACTCTGAAAGCTACTCTTCGAAAACCCCAGCAAAAGGGGCGATCGGTTAAGGATGGTGTTCGTGCAGGATATGGTGGTTTTCGAGGGGGTAGGGCCCCATGGGTTCGTGGTATTGGTGATATCGAGCCTAGGAGGACGGGAGCACGTGATAGTCGATTTGGGGCTCATGAA
GGAAGGCGGTTTTTTGAGGAAAGACGTCAACCTTTTGGAAGGGCATATGATAGGCGACCGCCTGGTCCTGCTTATGTACGAAGTGATTCTAGGAGGAATTATAGAGAAGATGATGCCTATCTTGATAGGCGAGATCGACCTTCAGGCAGATCTGTTGGAACAGTTACTAGGCGATCCTCATACAGGGATGATTATGGATA
TCATGGGGCTGGTTATACTGAGAGCATGCCTCCACGCAGGCCTGCGTATCCTGAGGATAGCTACAGTCATCGCATGAATGGAATGTCAACCTATAATGATGGACCTGTTCGTAATTACCCAGGAGTATCTGGGTCCAAGCGCCCGTATTCAGATGTGGATGATGATGTTCCATACCCAGCTCGGCATTCCAGGAGCCGTT
TGGATTATGATGCAGGGGCCGCAGATTCACGTTATGGAGGAGTGTCCAGGTTAGGACAAGATCAACAATCAGGTTACGGTGCAGGTGGCAGAGCTGGAGGAATATATTCAAATGACTACCTGCCTAGTGGCAATGATGTTGAAGGTGGAACATATCCACCTGTTACAAGTCGAAATGCGAGTGGGGGTTATGGACGTGGC
AGTGGCTCAGCATCATACTATTGAAAAATTTTGGTACAGACTTTGATGGAAAAAAGCAGAACAGATTTAATCCAAGCACCGGGATAAAGTTGTTTAGGCTGGTTCTCTATGAAAACAAAATCCTTCTTTAAGTACATGTAACATTCGTTAAGTCACTAGTGGCTTGTTACTCTGCATAAGCTAGTAATTAGGGAAATATA
AAAAATCCAGTGTTGATGGCGATATGATGTTCAAAGAGAATTTGGGTGTGTCAAACTGACATTATATGATGCCACAGCAAGCAAAGCTTATGTTATCTCCTATTGGAGGTTGGCAGAGTAGGAGAGAAGGTTACAACTTGTAGTAAATACATACTATTAACCAGTTCTGGATTTTTTCCCAGTTGAAGTAATAGGTTTTT
AGGTTTAATGGCGGATTTGGGACTTTGTCTTCAGAAGAATGAAAACTCAACTAATTATTATAGGATGTTTCGGTAACTTGTTTGTTTCAATGATTAAGTGTTGCCCACAGTAGGGCCTGAAGAGACAATTCACGTTGCATATCATTGATGTTCAGTTATTTGCTACAACATTGATATAGTATAATTTTGGTATTTGATGG
AGCTTACTGAAGCCAGATGTTTTGAGTTCAAGTTTCTGTGAAGATAGAAAGGTGGACAAGTATACTGATATATGGGCTACCAATCATTTCAAACATGGCCAAAGTGTGGTTGATTCTTATTTATTTAATCAGCTCGGCAGCATTTATGGATTTTGGCTTTACTGCTATTTTCTTTTGGACACTGTTAAGAAACAACTTTG
TGGTAGATAAAAATATCAACATGAGGTATGTACATATGCACAATGAAATTGGTTTTCATCAACATTCAAGGATTTGTACTAAGATTTAAGAAGTGGGCAATTTTCTGAAGTGTTGTTAAACATGAGATACCTAAGAAATTTGGTATTATTGAGATTCTGTTAAAGAGTATTCCAACAACGATGACATTTGAGACAGAGGA
GTGCATATACATTTCAATCATTGCATCACTGAATGAATTTAATGAAAAGTAAATGCTTGAGAGGTACATGCACACCTCCTTGTTCCAATATCAACATCTGCCTGGCGCCTTAGAAGAAAATATCCGAGTCTAACAAAGGATGCATCTCAATAGTAATGAAGTAAATGGGGTGTATGTTCCTTTTTTGAACTGGCCAAATG
TCTCAAGATTTACGTTGATTCAGAATTCACCTGGGTATAAACATGAGGTTTAGTGATACAGATTTCAAGTCGTTACTTTTGGCTATGAGCATTAGCTTTTTTTAATCAAATGAAGCAGCAGGAATGTATAAGATCTCAAGGTTCCAGGTTTCTTTTAGTTAATATTTTTATCAGATCTCTCTTGGTATACGGGTGAGATT
TAGTTGTCTTGGATAGCTTTATAGATATGCTAATCATGGTTTCTTCTAGTTTTGAAATAGGGTGCAAGAAAATACACATGCCATTGTGTTACCTATAAGAGGAATTATGAAACAAATTTCATTCTACTTGCAGTCAAGGGCATAGGAGAATAAGCACATGCCAATCATTGCATGGTTTCGTTGCTGGAGTGTGTTTTTGC
AGCTGAAGTATATTACATTGATAACAACTTGGTTGTGAACGAATTTTTATTTAGCATCAAATGTAATGATTGTTTGGTATTTCTTTCTTATCGATTTTCTCAGGAATATAATCATCGTGTTGTCTTGACTGCTACATTTATGCAAAGATATGATCTGGATACAGTTCAAGATGTCCCATTGCTGTTATGAACCAGATCAC
CCATTCAAGCTTGTTATTCTTGAATTGTTATGAACCAGATCACCCGGAATTGAGGTTATCATGTATTTTATGGTCTTTATGGAGAAATGCTGGGCTTCACTGGTTTGCTATCACTTTTTTTAGATTATC
>TRINITY_DN132954_c3_g1_i6 from sample A1 / Example unspliced isoform:GTAGTCATTGGTGAGCAGAGCCAGGTTAAGAATAAAGAACACCAGGATGGACCGGCTGAAATTAATGTAGTCATTGGTGAGCAGAGCCAGGTTAAGAATAAAGAACACCAGGATGGACCGGCTGAAATTAATGTAGTCATTGGTGAGCAGAGCCATGGAGATGAAGCTGGAGAAGGGGCAGGATGCCGTGAAGACGGTGT
TGGAGGAGATGCAGCTGATGACCAACGTGATGTGGAAATGCCTTCCATGGTCAAAGAGCGGATAAAGCAGAAAGAGTTTGAAGTGTTTGTTGGTGGGCTTGATAAGGACGCCGATGAAGAAGATCTGAAGAAAGTGTTTAGTGGGGTTGGTGAAGTTGTTGAGATCAGATTGGCGAAAAATCCTTTGACTCAGAAGAACA
AGGGCTTTGGATTTGTTCGTTTCGCGACTGTGGAGCAAGCCAAAAAAGCTGTGGCAGAGCTTAAGAATCCACAGGTGAGAGGGAAGCAATGTGGAGTTACACGAAGCCAAGATAATGAAACTCTTCATGTACGCAATATTTGTAAATCATGGACAAAAGAGACTCTTGAAAAGAAATTGACGGAATATGGAATAGACAAT
ATTGAAGAAATAACTTTGATGGAGGATCCACAACAAGAAGGGACAAATAGGGGGTTTGCATTTTTGGAGTTCCCCACTCATCTTGAGGCTACAAATGCCTTCAAGCGCTTGCAGAAGAGAGACGTTTTCTTTGGTATTGACCTCTGTGCAAAGGTTGCGTTTGCCAAATCTGGCATTGAGCCAGACGAGGAAGTTATGGC
GCAGGTTAAGTCTATTTTTGTTGATGGATTGCCACCTGCTTGGGATGAAGAGCAAGTTCAAGATAAATTTAAGAAGTATGGTGAAATTGAAAAAGTGCAGTTGGCACGAAATATGCCTACAGCTAAGCGAAAGGATTTTGGTTTCATTTCCTTCACAACTCGTGAAGCGGCACTGGCTTGCATTGAAGGAGTAAATAAGA
ATGAGCTAAATGAAGAAGATAACAAGGTTACTCTGAAAGCTACTCTTCGAAAACCCCAGCAAAAGGGGCGATCGGTTAAGGATGGTGTTCGTGCAGGATATGGTGGTTTTCGAGGGGGTAGGGCCCCATGGGTTCGTGGTATTGGTGATATCGAGCCTAGGAGGACGGGAGCACGTGATAGTCGATTTGGGGCTCATGAA
GGAAGGCGGTTTTTTGAGGAAAGACGTCAACCTTTTGGAAGGGCATATGATAGGCGACCGCCTGGTCCTGCTTATGTACGAAGTGATTCTAGGAGGAATTATAGAGAAGATGATGCCTATCTTGATAGGCGAGATCGACCTTCAGGCAGATCTGTTGGAACAGTTACTAGGCGATCCTCATACAGGGATGATTATGGATA
TCATGGGGCTGGTTATACTGAGAGCATGCCTCCACGCAGGCCTGCGTATCCTGAGGATAGCTACAGTCATCGCATGAATGGAATGTCAACCTATAATGATGGACCTGTTCGTAATTACCCAGGAGTATCTGGGTCCAAGCGCCCGTATTCAGATGTGGATGATGATGTTCCATACCCAGCTCGGCATTCCAGGAGCCGTT
TGGATTATGATGCAGGGGCCGCAGATTCACGTTATGGAGGAGTGTCCAGGTTAGGACAAGATCAACAATCAGGTTACGGTGCAGGTGGCAGAGCTGGAGGAATATATTCAAATGACTACCTGCCTAGTGGCAATGATGTTGAAGGTGGAACATATCCACCTGTTACAAGTCGAAATGCGAGTGGGGGTTATGGACGTGGC
AGTGGCTCAGCATCATACTATTGAAAAgtaagctttttaccattttaccttcaatgatcattttaaggcaattacaataggcgttcaacagttcctgcttttatatcgattgttatttctcgtgtcaagttattttgattcctttgctttagtggtgcttagtctttcctttccttcttacatatcttgatgttacacag
ATTTTGGTACAGACTTTGATGGAAAAAAGCAGAACAGATTTAATCCAAGCACCGGGATAAAGTTGTTTAGGCTGGTTCTCTATGAAAACAAAATCCTTCTTTAAGTACATGTAACATTCGTTAAGTCACTAGTGGCTTGTTACTCTGCATAAGCTAGTAATTAGGGAAATATAAAAAATCCAGTGTTGATGGCGATATGA
TGTTCAAAGAGAATTTGGGTGTGTCAAACTGACATTATATGATGCCACAGCAAGCAAAGCTTATGTTATCTCCTATTGGAGGTTGGCAGAGTAGGAGAGAAGGTTACAACTTGTAGTAAATACATACTATTAACCAGTTCTGGATTTTTTCCCAGTTGAAGTAATAGGTTTTTAGGTTTAATGGCGGATTTGGGACTTTG
TCTTCAGAAGAATGAAAACTCAACTAATTATTATAGGATGTTTCGGTAACTTGTTTGTTTCAATGATTAAGTGTTGCCCACAGTAGGGCCTGAAGAGACAATTCACGTTGCATATCATTGATGTTCAGTTATTTGCTACAACATTGATATAGTATAATTTTGGTATTTGATGGAGCTTACTGAAGCCAGATGTTTTGAGT
TCAAGTTTCTGTGAAGATAGAAAGGTGGACAAGTATACTGATATATGGGCTACCAATCATTTCAAACATGGCCAAAGTGTGGTTGATTCTTATTTATTTAATCAGCTCGGCAGCATTTATGGATTTTGGCTTTACTGCTATTTTCTTTTGGACACTGTTAAGAAACAACTTTGTGGTAGATAAAAATATCAACATGAGGT
ATGTACATATGCACAATGAAATTGGTTTTCATCAACATTCAAGGATTTGTACTAAGATTTAAGAAGTGGGCAATTTTCTGAAGTGTTGTTAAACATGAGATACCTAAGAAATTTGGTATTATTGAGATTCTGTTAAAGAGTATTCCAACAACGATGACATTTGAGACAGAGGAGTGCATATACATTTCAATCATTGCATC
ACTGAATGAATTTAATGAAAAGTAAATGCTTGAGAGGTACATGCACACCTCCTTGTTCCAATATCAACATCTGCCTGGCGCCTTAGAAGAAAATATCCGAGTCTAACAAAGGATGCATCTCAATAGTAATGAAGTAAATGGGGTGTATGTTCCTTTTTTGAACTGGCCAAATGTCTCAAGATTTACGTTGATTCAGAATT
CACCTGGGTATAAACATGAGGTTTAGTGATACAGATTTCAAGTCGTTACTTTTGGCTATGAGCATTAGCTTTTTTTAATCAAATGAAGCAGCAGGAATGTATAAGATCTCAAGGTTCCAGGTTTCTTTTAGTTAATATTTTTATCAGATCTCTCTTGGTATACGGGTGAGATTTAGTTGTCTTGGATAGCTTTATAGATA
TGCTAATCATGGTTTCTTCTAGTTTTGAAATAGGGTGCAAGAAAATACACATGCCATTGTGTTACCTATAAGAGGAATTATGAAACAAATTTCATTCTACTTGCAGTCAAGGGCATAGGAGAATAAGCACATGCCAATCATTGCATGGTTTCGTTGCTGGAGTGTGTTTTTGCAGCTGAAGTATATTACATTGATAACAA
CTTGGTTGTGAACGAATTTTTATTTAGCATCAAATGTAATGATTGTTTGGTATTTCTTTCTTATCGATTTTCTCAGGAATATAATCATCGTGTTGTCTTGACTGCTACATTTATGCAAAGATATGATCTGGATACAGTTCAAGATGTCCCATTGCTGTTATGAACCAGATCACCCATTCAAGCTTGTTATTCTTGAATTG
TTATGAACCAGATCACCCGGAATTGAGGTTATCATGTATTTTATGGTCTTTATGGAGAAATGCTGGGCTTCACTGGTTTGCTATCACTTTTTTTAGATTATC
Intron 4 GTATCTACTG ... TGCTGTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 10.52 | 93.5 | 1 | 10 |
| A2 | 11.88 | 79.3 | 1 | 10 |
| A3 | 1.38 | 81.5 | 0 | 1 |
| A4 | 7.19 | 54 | 0 | 4 |
| A5 | 4.5 | 50.5 | 1 | 2 |
| A6 | 0 | 206.5 | 0 | 0 |
| A7 | 1.07 | 212.5 | 0 | 2 |
| A8 | 3.04 | 213.5 | 0 | 6 |
| A9 | 2.47 | 133.5 | 1 | 3 |
| A10 | 1.3 | 169 | 0 | 2 |
>TRINITY_DN122390_c2_g3_i5 from sample A2 / Example spliced isoformCATTTGTTCCTTAAACCCTAAGACTACGCTGCACAGCGGTTGCATCTCAGGATCTAGATTGGTTGTTCCCCTTTTATAGCGCCGTTGATATACAGAGCCTGCCTCTTTCCTTCGTTTTGTGGTGTTTTCATTTCCGTGCTTTCAAACTCCAGGAGGTCTGGTTTTCGATCTCCACAGCATCATTTGTTCTGCAACAATGC
CTCCCCGTATTGTGAAAAAGACTGCCGTGACAACCCCTCTGAAAAAGACACCGGCTAAGGCTCCCAGCAAATCCCTTAAAACCCCGGCCAAGCCCGTGAGCTCTTCCCCACCGAAGGCAGAGCCCGAGGCCGTCGAGGATGCAGAGTCAAAGCCCTCGCCCACCGTTGAAGCTCCAAAAGCCGAAGAGAGAGTCATTGAG
CCATTTCAAGATTTGAATGAACCAAGTGTCGAAGCCGAGCCGGAGAAAGAAATTCCCATAGAGGATGCCAACAAGGAGGACACAGAACCAACCAAGGATGCCGACAAGCCTTATGCAGAAGGGAAAGAGGAGGGCGTCAAGGGGATACAATTAGAGAACAAGGAAACCGATGTTATTATGCAAGAAGCACAGTATAATGA
GTTTAAGGATAATGAACACCAGGATGGACCGGCTGAGGTTAAGGATAAAGAACACCAGGATGGACCAGCTGAGGTTAAGGATAAAGAACACCAGGGTGGACCAGCTGAGCTTAAGGATAAAGAACACCAGGATGGACCGGCTGAAAATAATGTAGTCATTGGTGAGCAGAGCCAGGTTAAGAATAAAGAACACCAGGATG
GACCGGCTGAAAATAATGTAGTCATTGGTGAGCAGAGCCATGGAGATGAAGCTGGAGAAGGGGCAGGATGCCGTGAAGACGGTGTTGGAGGAGATGCAGCTGATGACCAACGTGATGTGGAAATGCCTTCCATGGTCAAAGAGCGGATAAAGCAGAAAGAGTTTGAAGTGTTTGTTGGTGGGCTTGATAAGGACGCCGAT
GAAGAGGATCTGAAGAAAGTGTTTAGTGGGGTTGGTGAAGTTGTTGAGATCAGATTGGCGAAAAATCCTTTGACTCAGAAGAACAAGGGCTTTGGATTTGTTCGTTTCGCGACTGTGGAGCAAGCCAAAAAAGCTGTGGCAGAGCTTAAGAATCCACAGGTGAGAGGGAAGCAATGTGGAGTTACACGAAGCCAAGATAA
TGAAACTCTTCATGTACGCAATATTTGTAAATCATGGACAAAAGAGACTCTTGAAAAGAAATTGACGGAATATGGAATAGACAATATTGAAGAAATAACTTTGATGGAGGATCCACAACAAGAAGGGACAAATAGGGGGTTTGCATTTTTGGAGTTCCCCACTCATCTTGAGGCTACAAATGCCTTCAAGCGCTTGCAGA
AGAGAGACGTTTTCTTTGGTATTGACCTCTGTGCAAAGGTTGCGTTTGCCAAATCTGGCATTGAGCCAGACGAGGAAGTTATGGCGCAGGTTAAGTCTATTTTTGTTGATGGATTGCCACCTGCTTGGGATGAAGAGCAAGTTCAAGATAAATTTAAGAAGTATGGTGAAATTGAAAAAGTGCAGTTGGCACGAAATATG
CCTACAGCTAAGCGAAAGGATTTTGGATTCATTTCCTTCACAACTCGTGAAGCGGCACTGGCTTGCATTGAAGGAGTAAATAAGAATGAGCTAAATGAAGAAGATAACAAGGTTACTCTCAAAGCTACTCTTCGAAAACCCCAGCAAAAGGGGCGATCGGTTAAGGATGGTGTTCGTGCAGGATATGGTGGTTTTCGAGG
GGGTAGGGCCCCATGGGTTCGTGGTATTGGTGATATCGAGCCTAGGAGGACAGGAGCACGTGATAGTCGATTTGGGGCTCATGAAGGAAGGCGGTCTTTTGAGGAAAGACGTCAACCTTTTGGAAGGGCATATGATAGGCGACCGCCTGGTCCTGCTTATGTACGAAGTGATTCTAGGAGGAATTATAGAGAAGATGATG
CCTATCTTGATAGGCGAGATCGACCTTCAGGCAGATCTGTTGGAACAGTTACTAGGCGATCCTCATACAGGGATGATTATGGATATCATGGGGCTGGTTATACTGAGAGCATGCCTCCACGCAGGCCTGCGTATCCTGAGGATAGCTACAGTCATCGCATGAATGGAATGTCAACCTATAATGATGGACCTGTTCGTAAT
TACCCAGGAGTATCTGGGTCCAAGCGCCTGTATTCAGATGTGGATGATGATGTTCCATACCCAGCTCGGCATTCCAGGAGCCGTTTGGATTATGATGCAGGGGCCGCAGATTCACGTTATGGAGGAGTGTCCAGGTTAGGACAAGATCAACAATCAGGTTACGGTGCAGGTGGCAGAGCTGGAGGAATATATTCAAATGA
CTACCTGCCTAGTGGCAATGATGTAAGTATTTCCTATGAGTCATGAAATTAAGTTTGAGAATGCAATCTGTTCTATTCTTTCAAACATTTATCTTTGGCTACAGGTTGAAGGTGGAACATATCCACCTGTTACAAGTCGAAATGCGAGTGGGGGTTATGGACGTGGCAGTGGCTCAGCATCATACTATTGAAAA
>TRINITY_DN122390_c2_g3_i1 from sample A2 / Example unspliced isoform:CGCGTTATGGAGGAGTGTCCAGgtatctactgctgaaagttttaaatctgaacttgatatgtttaatcattttgtccagtccaaggttaacagtgaacactatgttttggttttccctgctgtgtagGTTAGGACAAGATCAACAATCAGGTTACGGTGCAGGTGGCAGAGCTGGAGGAATATATTCAAATGACTACCTG
CCTAGTGGCAATGATGTAAGTATTTCCTATGAGTCATGAAATTAAGTTTGAGAATGCAATCTGTTCTATTCTTTCAAACATTTATCTTTGGCTACAGGTTGAAGGTGGAACATATCCACCTGTTACAAGTCGAAATGCGAGTGGGGGTTATGGACGTGGCAGTGGCTCAGCATCATACTATTGAAAA