NA ----> NA
Intron 1 GTTGAATCAT ... CTACTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 81.31 | 8.7 | 36 | 37 |
| A2 | 74.39 | 9.3 | 28 | 21 |
| A3 | 78.34 | 9.7 | 33.5 | 36 |
| A4 | 80.65 | 6.7 | 26.5 | 27 |
| A5 | 71.53 | 5.3 | 11 | 15 |
| A6 | 70.25 | 4.3 | 11 | 9 |
| A7 | 71.82 | 24 | 63.5 | 48 |
| A8 | 71.93 | 9 | 20.5 | 24 |
| A9 | 76.92 | 10 | 32 | 31 |
| A10 | 72.11 | 19 | 51.5 | 42 |
>TRINITY_DN99788_c0_g2_i5 from sample A4 / Example spliced isoformTCCGGTTGAAGGTACCTCGCTTTAGGAATTCAGTTATATATTTGTTTTTACCGTATATGCTCTGTTGGATGAGGATAGGAAGACTTTTGGAATGGATCTCAGGAAGGTGATCGGTATGGAATGACGATCCAGGAATGAAGAAAGATAAAATATGTCACTCACCTGAATCAACATCTTTTCATTATGACATGATGGAGACA
CAAAAGCAAGCATCCAGCGGTGTGCTGCAGGAATGAGTCGCTGGGGTATGGAAGAATTAACACTAGGGCTGTATAAATTGTTTCATTGGCATGAACTGGAAGGTGCGATTGATACTATATCTGGTCCACAAGTTCAGGACATTGAGGAACTAGAAGAAATGTGCTACTGGTTTAAGTGGGCAATGGCTGCCTATCAAATG
GATCGGATCTCTATTGCTGAGAGTTTACAGATAAATGAGGAGCAGATTAAAAAGCATGTACGGACCTCTGCAGTTTTGAGACCATCATATTATATCGCAGTTGATAATGTGAAGTGTTGTCTGGTGATGGCTATACGTGGTACACAGTCTCCAACCGACATCATGACAGATTTGAATCCTCATAGTGAGAAGTTTGAAAA
AGGATATGCACATTCGGGGATGCTAGGTGCTGCCAAATGGATAATGGAGGAGGAGCATGAAAATCTTCAAATTCTGCTGAAAGCATACCCTGGGCACAAGTTCGTGCTCACAGGGCATTCCCTGGGGGCAGGCACTGCATCATTGTTGTGCATAATACTTCAGGAGTCAATGTTTAAAAATGACAAGGTAGATTTTACAA
GACCAAATGCTGCCAGTCCTATGATGGATTGTTGGGGCTTTGGATGTCCTCCGTGTGTGGACAAAGACCTTTCGCAACAACCTACCACCATTAGAAACATTATCCTTCAGGATGATCTTATTGCTCGCTTGAGTCCAGCTGCTTTAGAAGATCTGCACTTAGAAATCTCAAAGCTTAATTGGGTCCACATTCTTGGAGCT
AATAGCAAAATGAAAAAGATTGCGGAACTTGCCCAAACAATACATGGGACCCTGGATGGTATCGAGGCAAGATTAGGATATGAGAATGGCCATTTTTATCAACAGATTAAATCATACAGTTACTCTTCCCTTGCAGCTGCAAAGGACATGATTAGAACTCGCTTAACCGAACATCAACAACATACAAACAGTTCCACAAC
TCAAACTGCTTTTGATTGGCTCTCATATGGAGCTTCAACTATCATCCACTGTGCAGATATGTTTACAACCTCCAGTGTGAATCATTCACAAGCACAAACAAGGGATACAGCCATAACTGTGGCAACTGCTGCAGCGATTCCTACAAAAAAGCCAAGTTCAGATGATGTGCGACTATATATCCCTGGAATTCTTTACCATG
TTATTCGCAAAGACAAGCGAAAACATGTGCAAAATATAACTCCTATCAACAGATTATCAAGGTCAAACACTAACATTGAAGAGTTCACGGAATTGGAAGTTACAAATAAAGATGTGGGCACATCATCCAATCGTAACTCGACAAATGTTCCACCCCTAAAATGGACAAATGCTCCACCCTTAAAATGTATTGTCATACAG
GGTGATGATCCTGCACTTAGATTTACAAGAATTATATTATCAAACTCAATGTTGCTTGATCATCGTTGCCAGAGCTATCAAGGTGCTTTGGAGAGTGCAAGTGACTATGCTAGATATATTACTACATCTCATGGAAACGTTTCCCCTTGATTAGGGAAATCTACTTATAACATAGATTGAAGTGAGACTGATCAAAAGTC
TTGCTTATGCATTCCTCTCTCCAATATTCCTTATTGTTATGAAACAAAAGACATCAAACGTAACTGATGTTAGCATATGCCTT
>TRINITY_DN99788_c0_g2_i4 from sample A4 / Example unspliced isoform:TCCGGTTGAAGGTACCTCGCTTTAGGAATTCAGTTATATATTTGTTTTTACCGTATATGCTCTGTTGGATGAGGATAGGAAGACTTTTGGAATGGATCTCAGGAAGGTGATCGGTATGGAATGACGATCCAGCACTTTCTAAAGGAGCAATGTTTCAGCCAGCTCCAATATTTTAGGATGCTGGACCAAGTGATATGGAC
TTTGGAGGAATGAAGAAAGATAAAATATGTCACTCACCTGAATCAACATCTTTTCATTATGACATGATGGAGACACAAAAGgttgaatcatgagtatttttatttcatggtcaacatggatgtcaatgatgaatttaatctacttgcagCAAGCATCCAGCGGTGTGCTGCAGGAATGAGTCGCTGGGGTATGGAAGAAT
TAACACTAGGGCTGTATAAATTGTTTCATTGGCATGAACTGGAAGGTGCGATTGATACTATATCTGGTCCACAAGTTCAGGACATTGAGGAACTAGAAGAAATGTGCTACTGGTTTAAGTGGGCAATGGCTGCCTATCAAATGGATCGGATCTCTATTGCTGAGAGTTTACAGATAAATGAGGAGCAGATTAAAAAGCAT
GTACGGACCTCTGCAGTTTTGAGACCATCATATTATATCGCAGTTGATAATGTGAAGTGTTGTCTGGTGATGGCTATACGTGGTACACAGTCTCCAACCGACATCATGACAGATTTGAATCCTCATAGTGAGAAGTTTGAAAAAGGATATGCACATTCGGGGATGCTAGGTGCTGCCAAATGGATAATGGAGGAGGAGCA
TGAAAATCTTCAAATTCTGCTGAAAGCATACCCTGGGCACAAGTTCGTGCTCACAGGGCATTCCCTGGGGGCAGGCACTGCATCATTGTTGTGCATAATACTTCAGGAGTCAATGTTTAAAAATGACAAGGTAGATTTTACAAGACCAAATGCTGCCAGTCCTATGATGGATTGTTGGGGCTTTGGATGTCCTCCGTGTG
TGGACAAAGACCTTTCGCAACAACCTACCACCATTAGAAACATTATCCTTCAGGATGATCTTATTGCTCGCTTGAGTCCAGCTGCTTTAGAAGATCTGCACTTAGAAATCTCAAAGCTTAATTGGGTCCACATTCTTGGAGCTAATAGCAAAATGAAAAAGATTGCGGAACTTGCCCAAACAATACATGGGACCCTGGAT
GGTATCGAGGCAAGATTAGGATATGAGAATGGCCATTTTTATCAACAGATTAAATCATACAGTTACTCTTCCCTTGCAGCTGCAAAGGACATGATTAGAACTCGCTTAACCGAACATCAACAACATACAAACAGTTCCACAACTCAAACTGCTTTTGATTGGCTCTCATATGGAGCTTCAACTATCATCCACTGTGCAGA
TATGTTTACAACCTCCAGTGTGAATCATTCACAAGCACAAACAAGGGATACAGCCATAACTGTGGCAACTGCTGCAGCGATTCCTACAAAAAAGCCAAGTTCAGATGATGTGCGACTATATATCCCTGGAATTCTTTACCATGTTATTCGCAAAGACAAGCGAAAACATGTGCAAAATATAACTCCTATCAACAGATTAT
CAAGGTCAAACACTAACATTGAAGAGTTCACGGAATTGGAAGTTACAAATAAAGATGTGGGCACATCATCCAATCGTAACTCGACAAATGTTCCACCCCTAAAATGGACAAATGCTCCACCCTTAAAATGTATTGTCATACAGGGTGATGATCCTGCACTTAGATTTACAAGAATTATATTATCAAACTCAATGTTGCTT
GATCATCGTTGCCAGAGCTATCAAGGTGCTTTGGAGAGTGCAAGTGACTATGCTAGATATATTACTACATCTCATGGAAACGTTTCCCCTTGATTAGGGAAATCTACTTATAACATAGATTGAAGTGAGACTGATCAAAAGTCTTGCTTATGCATTCCTCTCTCCAATATTCCTTATTGTTATGAAACAAAAGACATCAA
ACGTAACTGATGTTAGCATATGCCTT