sp|Q946Y7|SYP61_ARATH ----> Syntaxin-61
Intron 1 GTAATGTGTC ... TGGTGGGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.49 | 136 | 54 | 44 |
| A2 | 26.89 | 140 | 51 | 52 |
| A3 | 16.86 | 106 | 15 | 28 |
| A4 | 27.06 | 93 | 39 | 30 |
| A5 | 28.57 | 50 | 13 | 27 |
| A6 | 18.43 | 250 | 48 | 65 |
| A7 | 19.36 | 556 | 113 | 154 |
| A8 | 22.68 | 370 | 95 | 122 |
| A9 | 20.37 | 522 | 127 | 140 |
| A10 | 21.88 | 482 | 127 | 143 |
>TRINITY_DN41953_c0_g1_i1 from sample A6 / Example spliced isoformCAGCGGAAGACATGTATGTAGTCACAAAGTTAAGCGTATAAGAAAGGAAAACAAGAATTATCAATCGTTGAAGCTGTGTCTGTGGCAGTGGCAAAACAAATAAAATAAAATGTCTGCAGCTCAAGATCCATTTAATATAGTCAAGGACGAGATCCAGGATTCTGTGAATAAATTACAGGCTACATTCAGAAGATGGGAAC
AACTATTTCCAAGTTCAGCTGAAAGGATTCATCTTACAAAAGAGCTGCTTGCAGGATGTGAAAGCATTGAATGGCAGGTAGATGAGCTTGGAAGGGCCATTGCAGTGGCAGAACGGGATCCAGCACGGTTTAGCATTGATGAAGTTGAACTTGCGAAGCGAAAGAGATGGACTGGTTCAACTCGGAGTCAGATGGAGACA
TTGAGCAAAGCTGTGCAAATGGGTATGGACAAATCTTCTTCGCAGAACCAATCAGCTAATATCAGTATGAATGGCATGCGCCGGGAACTTCTAAGGTTACCAAATGATCATCTGGGTGCAAAACCAAATCAAGCTACGACCTCAAATAATGACCAATTTCTTACATCAGAAACAGATAGACAAGTTCTTCTCATAAAAGA
ACAAGATCAAGAGCTAGATGAGCTTGGTGCAAGTGTTGAGAGATTTGGTGGTGTTGCTCTCACAATACATGAAGAACTCATGGGACAGGAAAGAATTTTGGAGGGACTTGACCAAGACATGGACACAACTTCCAATAGGCTGGAATTTGTTCAAAGAAAAGTGGGTTTGGTGTTGAAGAAGGCAGGAGCCAAGGGACAGA
TAATGATGATTGTGTTTTTGTTGATATTGTTTATAGTGTTGGTTCTTCTTGTATTCTACACCTAGCATCTTCCATGGCACGTGTTTCAATAAGTTAATGATGATATCCTCAGTTCGATTGGAAGTAGGCTTTTGAACCTTTGATCTTGGGTATTGCTACTAAGTGATGTATAAAGGAGTTCTGTAGAAAATATTACGGTT
TGCGGCTTGACATGATATACTGAGCTTGAGGTTCTCATCGATAAGGAAGTAATTGATAGGTATAACGTTTATGGAATCCAAAATGCATTGAAATTCTCCAAACTGAGATATGCTGGTATGTTACACAGCCTTGTAATGCTTTTGGCTCAATAAATAATTGATAGCTGTTTCAGGTCGCT
>TRINITY_DN41953_c0_g1_i9 from sample A6 / Example unspliced isoform:CAGCGGAAGACATGTATGTAGTCACAAAGTTAAGCGTATAAGAAAGGAAAACAAGAATTATCAATCGTTGAAGCTGTGTCTGTGGCAGTGGCAAAACAAATAAAATAAAATGTCTGCAGCTCAAGATCCATTTAATATAGTCAAGGACGAGATCCAGGATTCTGTGAATAAATTACAGGCTACATTCAGAAGATGGGAGC
AACTCTTTCCAAGTTCAGGGGAAAGGATTCATCTTACAAAAGAGCTGCTTGCAGGATGTGAAAGCATTGAATGGCAGgtaatgtgtccgtttaggtgtatttgcaatattttacttgctacctacctacctacatgcaagataaccacaaaatgtgcatttgaagctgcctgtactgaagccttcaccatggattagtgg
aagggattgaattaaagattcttatttgtgatttcttcaaaagatggatttttgttcaccttgatttgtttagacttcatttgctgaggagctgggtttttggtgggaagGTAGATGAGCTTGGAAGGGCCATTGCAGTGGCAGAACGGGATCCAGCACGGTTTAGCATTGATGAAGTTGAACTTGCGAAGCGAAAGAGA
TGGACTGGTTCAACTCGGAGTCAGATGGAGACATTGAGCAAAGCTGTGCAAATGGGTATGGACAAATCTTCTTCGCAGAACCAATCAGCTAATATCAGTATGAATGGCATGCGCCGGGAACTTCTAAGGTTACCAAATGATCATCTGGGTGCAAAACCAAATCAAGCTACGACCTCAAATAATGACCAATTTCTTACATC
AGAAACAGATAGACAAGTTCTTCTCATAAAAGAACAAGATCAAGAGCTAGATGAGCTTGGTGCAAGTGTTGAGAGATTTGGTGGTGTTGCTCTCACAATACATGAAGAACTCATGGGACAGGAAAGAATTTTGGAGGGACTTGACCAAGACATGGACACAACTTCCAATAGGCTGGAATTTGTTCAAAGAAAAGTGGGTT
TGGTGATGAAGAAGGCAGGAGCCAAGGGACAGATAATGATGATTGTGTTTTTGTTGATATTGTTTATAGTGTTGGTTCTTCTTGTATTCTACACCTAGCATCTTCCATGGCACGTGTTTCAATAAGTTAATGATGATATCCTCAGTTCGATTGGAAGTAGGCTTTTGAATATTTGATCTTGGGTATTGCTACTAAGTGAT
GTATAAAGGAGTTCTGTAAAAAATATTATGGTTTGCGGCTTGACATGATATACTGAGCTTGAGGTTCTCATCGATAAGGAAGTAATTGATAGGTATAACGTTTATGGAATCCAAAATGCATTGAAATTCTCCAAACTGAGATATGCTGGTATGTTACACAGCCTTGTAATGCTTTTGGCTCAATAAATAATTGATAGCTG
TTTCAGGTCGCT
Intron 2 GTTAGTTCTA ... TTTTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 9.8 | 92 | 10 | 0 |
| A2 | 12.91 | 67.5 | 10 | 0 |
| A3 | 23.23 | 76 | 23 | 0 |
| A4 | 16.42 | 56 | 11 | 2 |
| A5 | 15.15 | 28 | 5 | 0 |
| A6 | 15.39 | 330 | 60 | 2 |
| A7 | 17.61 | 519.5 | 111 | 3 |
| A8 | 17.94 | 649.5 | 142 | 3 |
| A9 | 15.09 | 574 | 102 | 1 |
| A10 | 15.54 | 462 | 85 | 2 |
>TRINITY_DN41953_c0_g1_i1 from sample A6 / Example spliced isoformCAGCGGAAGACATGTATGTAGTCACAAAGTTAAGCGTATAAGAAAGGAAAACAAGAATTATCAATCGTTGAAGCTGTGTCTGTGGCAGTGGCAAAACAAATAAAATAAAATGTCTGCAGCTCAAGATCCATTTAATATAGTCAAGGACGAGATCCAGGATTCTGTGAATAAATTACAGGCTACATTCAGAAGATGGGAAC
AACTATTTCCAAGTTCAGCTGAAAGGATTCATCTTACAAAAGAGCTGCTTGCAGGATGTGAAAGCATTGAATGGCAGGTAGATGAGCTTGGAAGGGCCATTGCAGTGGCAGAACGGGATCCAGCACGGTTTAGCATTGATGAAGTTGAACTTGCGAAGCGAAAGAGATGGACTGGTTCAACTCGGAGTCAGATGGAGACA
TTGAGCAAAGCTGTGCAAATGGGTATGGACAAATCTTCTTCGCAGAACCAATCAGCTAATATCAGTATGAATGGCATGCGCCGGGAACTTCTAAGGTTACCAAATGATCATCTGGGTGCAAAACCAAATCAAGCTACGACCTCAAATAATGACCAATTTCTTACATCAGAAACAGATAGACAAGTTCTTCTCATAAAAGA
ACAAGATCAAGAGCTAGATGAGCTTGGTGCAAGTGTTGAGAGATTTGGTGGTGTTGCTCTCACAATACATGAAGAACTCATGGGACAGGAAAGAATTTTGGAGGGACTTGACCAAGACATGGACACAACTTCCAATAGGCTGGAATTTGTTCAAAGAAAAGTGGGTTTGGTGTTGAAGAAGGCAGGAGCCAAGGGACAGA
TAATGATGATTGTGTTTTTGTTGATATTGTTTATAGTGTTGGTTCTTCTTGTATTCTACACCTAGCATCTTCCATGGCACGTGTTTCAATAAGTTAATGATGATATCCTCAGTTCGATTGGAAGTAGGCTTTTGAACCTTTGATCTTGGGTATTGCTACTAAGTGATGTATAAAGGAGTTCTGTAGAAAATATTACGGTT
TGCGGCTTGACATGATATACTGAGCTTGAGGTTCTCATCGATAAGGAAGTAATTGATAGGTATAACGTTTATGGAATCCAAAATGCATTGAAATTCTCCAAACTGAGATATGCTGGTATGTTACACAGCCTTGTAATGCTTTTGGCTCAATAAATAATTGATAGCTGTTTCAGGTCGCT
>TRINITY_DN41953_c0_g1_i11 from sample A6 / Example unspliced isoform:CGTCAATGACATTTATCCTTTTTCTGAATTTTGCTTTCTGCAAAGATATGTATTTGCTATTCTGTTATTAAAAGGATGATCAAATGTCTGTTATCGAACATTGCTTTTAAATGTAATTTTTTTATTATAAACAGTGTTCTAGACACCTATGCTTGAGAAATAACACCTGTCTGCTTTTCTTGAATAGCATAGAGTCTGGT
AGCATCTTAACTTGCTTTGCGTGATGACCAGAGAACAAGATCAAGAGCTAGATGAGCTTGGTGCAAGTGTTGAGAGATTTGGTGGTGTTGCTCTCACAATACATGAAGAACTCATGGGACAGGAAAGAATTTTGGAGGGACTTGACCAAGACATGGACACAACTTCCAATAGGCTGGAATTTGTTCAAgttagttctaag
agtacaccatcgattttctaaaatgaatcctcgcattcccaaaatttattccttgttatatgcatgcgattctcctctctcttcatatttttgactatttctaaatcatacaagagactaaaattaatgaaacatgagtctaaatgaatatgctatctgctttttctgttcagatttatatagctgtcattcaaaattaa
aattgaaaggcacatcagggtcagaggttactcttaagcaccgttctaaattcaaccagaaagcattagttgccgagatttttaatccaaaacatttttttgtgcagAGAAAAGTGGGTTTGGTGTTGAAGAAGGCAGGAGCCAAGGGACAGATAATGATGATTGTGTTTTT