NA ----> NA

Intron 1 GTGATTTCCC ... AATGTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	70.56	7.3	13	21
A2	77.04	6	20	18
A3	88.53	2.7	22.7	16
A4	57.87	11	11	19
A5	81.58	2	9	6.7
A6	74.5	68	145.5	244
A7	78.31	26	83.8	102
A8	72.07	51.7	90.7	173
A9	78.56	33.3	89	154
A10	68	26.3	54.5	56

>TRINITY_DN38720_c0_g1_i2 from sample A8 / Example spliced isoform

ACACATGTATCAAGCTTTCTGTGCTTCTGATTGGAGGCACCTTCTCCATGTACGCAGGTGAAGTACTCCCTGTAAATCTGTAGAAATTTGTAGCTGCTATACAAATTCAAATGTTTGAATGTGTTTCAAAGAAGGACAATCCATTTTACAATAAAATGATTCTTTCTAAAATTTTCTCCCTACATATTTTACAAAGAAGC
ATTGGCAGTTGCTTCAGAGCAACAGTGTCCGAGTTGTTTTATGTTTGACTTGGTAAAACACGGTGAAACATTATTCCAACTTGGTATTATATCAGTTTAAACACTGGCAGAAGCTCTATTCTATTGTTTACTGTAATTTTTCAGTTTGTCTGTGTTAATAGGTAGTTTTGGTTGCTACCAAAGCACTTTGTGGGAATTTA
ACCCGTAAATGAATTTTGTTGATCACTGGTGACTCGGTGAGTTGTATATGCAATCTTACAATATCTGAATTGAGTCCTGTGATTTCTG

>TRINITY_DN38720_c0_g1_i1 from sample A8 / Example unspliced isoform:

GGGGGATGGGAGGTGGAATCATACGTGTAAGGCAAGGTAGAGCGAACGAAATTATTGGGTATTCTTGAACAGGCTTCATTCAAAATTTGAAGAATGCTCTCAGATTTTTTGGAGCTCAGAGTGATAGAATTAGGCCCATAAGATGTTTTGATCTTGATTATTGAATCCAGTTCTAAAACATCTCCTTCTGTGATTGTTTG
GCCATTTCTCCTCTGTTTTCTGTAGCCCATAATCTTATTCTCTGTACATTATGGGGATATATTTATCCTTAGATTGATGCAGAGAATCTGCACCTTGTTTAGCTCATAATAGAATTTTGTCCTTAGATCGAAAAGGAGGTTGTGCAGGAATTTTTGGTGTAGATTTCTGCTTTTTTTGGTTGAAGGACTTGCAATCTGTG
CCAGCCCTTGATATTTTTCGGGGGGCCTCAAGTTTCAGTCTAATTTTGATTCCTGCATTTGTATTTATACTTGATTCATGTGGTTGGATCAATTTAGGACTTCTGTGGGTTACTAAATAGATTTGGGCTAGGCTGATTTCTTCTTGTCTGTTGGGCTCTTCAAGCTCAAGCCCAAGTTTTGTGAGGATTTTGAGGATTCA
AACCATCTACCAGCACAGATCTTTGTTAAGGGAACCCTCAAGAAATGGAGAAGAGCGATCAAATATTCAGGCCACCAGAGCAGGATTTTATATTACAATGGGGGAATCGCAAGCGCCTCAGATGTTTCAAAGTACAAGTCGAAGACAAAATGAAGAGAACCACCATTCGTGTAGACAGGCGCGTTATCAGAGCCGAGAAG
GAAAATCCATCAACTCAAATGCCAGATTGCACTCAACCGAATCGCCTAGGCAGCAGGAATTCACACCCAGCGGTTGTCAAATCCACGGCCGTCGAGGGAATCAAAGTCCATAACAATGGCCATTTTTCCCCGGACAAGAATGATAAATTTCCTTTGCGAGGGAATAATGGGTGTTCCTCCACTGATGATACCAACAAGAT
TTCCACCGATGCAGACACAATGCAAGATAATAAGGTCTCCAACTTGGGGGTGTTTGTGTGGCCCAAATTTGTCGTAGCCCTCTCCAGCAAGGAGAAAGAGGAGGATTTCATGGCCATCAAGGGCTCCAAGTTGCCCCTGAGGCCCAAGAAGCGGGCGAAATTTATCCAGAGAGCCTTACATCTAGTTAGCCCTGGTGCAT
GGCTTTGCGAGCTGTCACAAGATCGATATGAAGTACGAGAAAAGAAAAGCACAAAAAAGAGACCAAGGGGTTTGAAGGCCATGGGAAACTTTGAGACTGACTCTGACTAGAATTCTAACGTGGCATACACATGTATCAAGCTTTCTgtgatttcccttggcattatttgtagatcagagagagtgaactacaaatggtct
tggtgagattccaccgattgttgtgtgtcctgattacagggttcatacttcgttcctattttttagtagtaaatttgttatctgtgactggaaatttaattttaagcctgcaatgtttcagGTGCTTCTGATTGGAGGCACCTTCTCCATGTACGCAGGTGAAGTACTCCCTGTAAATCTGTAGAAATTTGTAGCTGCTA
TACAAATTCAAATGTTTGAATGTGTTTCAAAGAAGGACAATCCATTTTACAATAAAATGATTCTTTCTTCAATTTTCTCCCTACATATTTTACAAAGAAGCATTGGCAGTTGCTTCAGAGCAACAGTGTCCGAGTTGTTTTATGTTTGACTTGGTAAAACACGGTGAAACATTATTCCAACTTGGTATTATATCAGTTTA
AACACTGGCAGAAGCTCTATTCTATTGTTTACTGTAATTTTTCAGTTTGTCTGTGTTAATAGGTAGTTTTGGTTGCTACCAAAGCACTTTGTGGGAATTTAACCCGTAAATGAATTTTGTTGATCACTGGTGACTCGGTGAGTTGTATATGCAATCTTACAATATCTGAATTGAGTCCTGTGATTTCTG

Intron 2 GTGAGATTCC ... AATGTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	71.93	8	20	21
A2	74.07	7	22	18
A3	52	18	23	16
A4	59.09	9	7	19
A5	72.08	3	9	6.5
A6	65.06	109	162	244
A7	63.33	55	88	102
A8	62.99	83	109.5	173
A9	63.12	71	89	154
A10	56.61	41	51	56

>TRINITY_DN38720_c0_g1_i3 from sample A8 / Example spliced isoform

GGGGGATGGGAGGTGGAATCATACGTGTAAGGCAAGGTAGAGCGAACGAAATTATTGGGTATTCTTGAACAGGCTTCATTCAAAATTTGAAGAATGCTCTCAGATTTTTTGGAGCTCAGAGTGATAGAATTAGGCCCATAAGATGTTTTGATCTTGATTATTGAATCCAGTTCTAAAACATCTCCTTCTGTGATTGTTTG
GCCATTTCTCCTCTGTTTTCTGTAGCCCATAATCTTATTCTCTGTACATTATGGGGATATATTTATCCTTAGATTGATGCAGAGAATCTGCACCTTGTTTAGCTCATAATAGAATTTTGTCCTTAGATCGAAAAGGAGGTTGTGCAGGAATTTTTGGTGTAGATTTCTGCTTTTTTTGGTTGAAGGACTTGCAATCTGTG
CCAGCCCTTGATATTTTTCGGGGGGCCTCAAGTTTCAGTCTAATTTTGATTCCTGCATTTGTATTTATACTTGATTCATGTGGTTGGATCAATTTAGGACTTCTGTGGGTTACTAAATAGATTTGGGCTAGGCTGATTTCTTCTTGTCTGTTGGGCTCTTCAAGCTCAAGCCCAAGTTTTGTGAGGATTTTGAGGATTCA
AACCATCTACCAGCACAGATCTTTGTTAAGGGAACCCTCAAGAAATGGAGAAGAGCGATCAAATATTCAGGCCACCAGAGCAGGATTTTATATTACAATGGGGGAATCGCAAGCGCCTCAGATGTTTCAAAGTACAAGTCGAAGACAAAATGAAGAGAACCACCATTCGTGTAGACAGGCGCGTTATCAGAGCCGAGAAG
GAAAATCCATCAACTCAAATGCCAGATTGCACTCAACCGAATCGCCTAGGCAGCAGGAATTCACACCCAGCGGTTGTCAAATCCACGGCCGTCGAGGGAATCAAAGTCCATAACAATGGCCATTTTTCCCCGGACAAGAATGATAAATTTCCTTTGCGAGGGAATAATGGGTGTTCCTCCACTGATGATACCAACAAGAT
TTCCACCGATGCAGACACAATGCAAGATAATAAGGTCTCCAACTTGGGGGTGTTTGTGTGGCCCAAATTTGTCGTAGCCCTCTCCAGCAAGGAGAAAGAGGAGGATTTCATGGCCATCAAGGGCTCCAAGTTGCCCCTGAGGCCCAAGAAGCGGGCGAAATTTATCCAGAGAGCCTTACATCTAGTTAGCCCTGGTGCAT
GGCTTTGCGAGCTGTCACAAGATCGATATGAAGTACGAGAAAAGAAAAGCACAAAAAAGAGACCAAGGGGTTTGAAGGCCATGGGAAACTTTGAGACTGACTCTGACTAGAATTCTAACGTGGCATACACATGTATCAAGCTTTCTGTGATTTCCCTTGGCATTATTTGTAGATCAGAGAGAGTGAACTACAAATGGTCT
TGGTGCTTCTGATTGGAGGCACCTTCTCCATGTACGCAGGTGAAGTACTCCCTGTAAATCTGTAGAAATTTGTAGCTGCTATACAAATTCAAATGTTTGAATGTGTTTCAAAGAAGGACAATCCATTTTACAATAAAATGATTCTTTCTTCAATTTTCTCCCTACATATTTTACAAAGAAGCATTGGCAGTTGCTTCAGA
GCAACAGTGTCCGAGTTGTTTTATGTTTGACTTGGTAAAACACGGTGAAACATTATTCCAACTTGGTATTATATCAGTTTAAACACTGGCAGAAGCTCTATTCTATTGTTTACTGTAATTTTTCAGTTTGTCTGTGTTAATAGGTAGTTTTGGTTGCTACCAAAGCACTTTGTGGGAATTTAACCCGTAAATGAATTTTG
TTGATCACTGGTGACTCGGTGAGTTGTATATGCAATCTTACAATATCTGAATTGAGTCCTGTGATTTCTG

>TRINITY_DN38720_c0_g1_i4 from sample A8 / Example unspliced isoform:

GGGGGATGGGAGGTGGAATCATACGTGTAAGGCAAGGTAGAGCGAACGAAATTATTGGGTATTCTTGAACAGGCTTCATTCAAAATTTGAAGAATGCTCTCAGATTTTTTGGAGCTCAGAGTGATAGAATTAGGCCCATAAGATGTTTTGATCTTGATTATTGAATCCAGTTCTAAAACATCTCCTTCTGTGATTGTTTG
GCCATTTCTCCTCTGTTTTCTGTAGCCCATAATCTTATTCTCTGTACATTATGGGGATATATTTATCCTTAGATTGATGCAGAGAATCTGCACCTTGTTTAGCTCATAATAGAATTTTGTCCTTAGATCGAAAAGGAGGTTGTGCAGGAATTTTTGGTGTAGATTTCTGCTTTTTTTGGTTGAAGGACTTGCAATCTGTG
CCAGCCCTTGATATTTTTCGGGGGGCCTCAAGTTTCAGTCTAATTTTGATTCCTGCATTTGTATTTATACTTGATTCATGTGGTTGGATCAATTTAGGACTTCTGTGGGTTACTAAATAGATTTGGGCTAGGCTGATTTCTTCTTGTCTGTTGGGCTCTTCAAGCTCAAGCCCAAGTTTTGTGAGGATTTTGAGGATTCA
AACCATCTACCAGCACAGATCTTTGTTAAGGGAACCCTCAAGAAATGGAGAAGAGCGATCAAATATTCAGGCCACCAGAGCAGGATTTTATATTACAATGGGGGAATCGCAAGCGCCTCAGATGTTTCAAAGTACAAGTCGAAGACAAAATGAAGAGAACCACCATTCGTGTAGACAGGCGCGTTATCAGAGCCGAGAAG
GAAAATCCATCAACTCAAATGCCAGATTGCACTCAACCGAATCGCCTAGGCAGCAGGAATTCACACCCAGCGGTTGTCAAATCCACGGCCGTCGAGGGAATCAAAGTCCATAACAATGGCCATTTTTCCCCGGACAAGAATGATAAATTTCCTTTGCGAGGGAATAATGGGTGTTCCTCCACTGATGATACCAACAAGAT
TTCCACCGATGCAGACACAATGCAAGATAATAAGGTCTCCAACTTGGGGGTGTTTGTGTGGCCCAAATTTGTCGTAGCCCTCTCCAGCAAGGAGAAAGAGGAGGATTTCATGGCCATCAAGGGCTCCAAGTTGCCCCTGAGGCCCAAGAAGCGGGCGAAATTTATCCAGAGAGCCTTACATCTAGTTAGCCCTGGTGCAT
GGCTTTGCGAGCTGTCACAAGATCGATATGAAGTACGAGAAAAGAAAAGCACAAAAAAGCTGCTAAGCTTGACTTCTTCAATATGTGGATGGATGCAGAGACCAAGGGGTTTGAAGGCCATGGGAAACTTTGAGACTGACTCTGACTAGAATTCTAACGTGGCATACACATGTATCAAGCTTTCTGTGATTTCCCTTGGC
ATTATTTGTAGATCAGAGAGAGTGAACTACAAATGGTCTTGgtgagattccaccgattgttgtgtgtcctgattacagggttcatacttcgttcctattttttagtagtaaatttgttatctgtgactggaaatttaattttaagcctgcaatgtttcagGTGCTTCTGATTGGAGGCACCTTCTCCATGTACGCAGGTG
AAGTACTCCCTGTAAATCTGTAGAAATTTGTAGCTGCTATACAAATTCAAATGTTTGAATGTGTTTCAAAGAAGGACAATCCATTTTACAATAAAATGATTCTTTCTTCAATTTTCTCCCTACATATTTTACAAAGAAGCATTGGCAGTTGCTTCAGAGCAACAGTGTCCGAGTTGTTTTATGTTTGACTTGGTAAAACA
CGGTGAAACATTATTCCAACTTGGTATTATATCAGTTTAAACACTGGCAGAAGCTCTATTCTATTGTTTACTGTAATTTTTCAGTTTGTCTGTGTTAATAGGTAGTTTTGGTTGCTACCAAAGCACTTTGTGGGAATTTAACCCGTAAATGAATTTTGTTGATCACTGGTGACTCGGTGAGTTGTATATGCAATCTTACA
ATATCTGAATTGAGTCCTGTGATTTCTG

Intron 3 GTATTTATTG ... AATTTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	20	8	2	5
A2	62.5	3	5	0
A3	14.29	6	1	3
A4	28.57	5	2	3
A5	25	6	2	1
A6	41.41	58	41	8
A7	40	33	22	5
A8	32.73	37	18	3
A9	35.59	38	21	9
A10	32.14	19	9	2

>TRINITY_DN40848_c0_g1_i2 from sample A7 / Example spliced isoform

GGGAGGTGGAATCATACGTGTAAGGCAAGGTAGAGCGAACGAAATTATTGGGTATTCTTGAACAGGCTTCATTCAAAATTTGAAGAATGCTCTCAGATTTTTTGGAGCTCAGAGTGATAGAATTAGGCCCATAAGATGTTTTGATCTTGATTATTGAATCCAGTTCTAAAACATCTCCTTCTGTGATTGTTTGGCCATTT
CTCCTCTGTTTTCTGTAGCCCATAATCTTATTCTCTGTACATTATGGGGATATATTTATCCTTAGATTGATGCAGAGAATCTGCACCTTGTTTAGCTCATAATAGAATTTTGTCCTTAGATCGAAAAGGAGGTTGTGCAGGAATTTTTGGTGTAGATTTCTGCTTTTTTTGGTTGAAGGACTTGCAATCTGTGCCAGCCC
TTGATATTTTTCGGGGGGCCTCAAGTTTCAGTCTAATTTTGATTCCTGCATTTGTATTTATACTTGATTCATGTGGTTGGATCAATTTAGGACTTCTGTGGGTTACTAAATAGATTTGGGCTAGGCTGATTTCTTCTTGTCTGTTGGGCTCTTCAAGCTCAAGCCCAAGTTTTGTGAGGATTTTGAGGATTCAAACCATC
TACCAGCACAGATCTTTGTTAAGGGAACCCTCAAGAAATGGAGAAGAGCGATCAAATATTCAGGCCACCAGAGCAGGATTTTATATTACAATGGGGGAATCGCAAGCGCCTCAGATGTTTCAAAGTACAAGTCGAAGACAAAATGAAGAGAACCACCATTCGTGTAGACAGGCGCGTTATCAGAGCCGAGAAGGAAAATC
CATCAACTCAAATGCCAGATTGCACTCAACCGAATCGCCTAGGCAGCAGGAATTCACACCCAGCGGTTGTGAAATCCACGGCCGTCGAGGGAATCAAAGTCCATAACAATGGCCATTTTTCCCCGGACAAGAATGATAAATTTCCTTTGCGAGGGAATAATGGGTGTTCCTCCACTGATGATACCAACAAGATTTCCACC
GATGCAGACACAATGCAAGATAATAAGGTCTCCAACTTGGGGGTGTTTGTGTGGCCCAAATTTGTCGTAGCCCTCTCCAGCAAGGAGAAAGAGGAGGATTTCATGGCCATCAAGGGCTCCAAGTTGCCCCTGAGGCCCAAGAAGCGGGCGAAATTTATCCAGAGAGCCTTACATCTAGTTAGCCCTGGTGCATGGCTTTG
CGAGCTGTCACAAGATCGATATGAAGTACGAGAAAAGAAAAGCACAAAAAAGCTGCTAAGCTTGACTTCTTCAATATGTGGATGGATGCAGAGACCAAGGGGTTTGAAGGCCATGGGAAACTTTGAGACTGACTCTGACTAGAATTCTAACGTGGCATACACATGTATCAAGCTTTCTGTGATTTCCCTTGGCATTATTT
GTAGATCAGAGAGAGTGAACTACAAATGGTCTTGGTGAGATTCCACCGATTGTTGTGTGTCCTGATTACAGGGTTCATACTTCGTTCCTATTTTTTAGTAGTAAATTTGTTATCTGTGACTGGAAATTTAATTTTAAGCCTGCAATGTTTCAGGTGCTTCTGATTGGAGGCACCTTCTCCATGTACGCAGGTGAAGTACT
CCCTGTAAATCTGTAGAAATTTGTAGCTGCTATACAAATTCAAATGTTTGAATGTGTTTCAAAGAAGGACAATCCATTTTACAATAAAATGATTCTTTCTTCAATTTTCTCCCTACATATTTTACAAAGAAGCATTGGCAGTTGCTTCAGAGCAACAGTGTCCGAGTTGTTTTATGTTTGACTTGGTAAAACACGGTGAA
ATATTATTCCAACTTGGTATTATAACAGTTTAAACACTGGCAGAAGCTCTATTCTATTGTTTACTGTAATTTTTCAGTTTGTCTGTGTTAATAGGTAGTTTTGGTTGCTACCAAAGCACTTTGTGGGAATTTAACCCGTAAATGAATTTTGTTGATCACTGGTGACTCGGTGAGTTGTATATGCAATCTTACAATATCTG
AATTGAGTCCTGTGATTTCTGAAGATGTGGACTGACAAAGATATGGTATTTTCTATGGTAATTGTTGTTAGATTAGGATGATTTCAGTTCATGCCAACTT

>TRINITY_DN40848_c0_g1_i3 from sample A7 / Example unspliced isoform:

GGGAGGTGGAATCATACGTGTAAGGCAAGGTAGAGCGAACGAAATTATTGGGTATTCTTGAACAGGCTTCATTCAAAATTTGAAGAATGCTCTCAGATTTTTTGGAGCTCAGAGTGATAGAATTAGGCCCATAAGATGTTTTGATCTTGATTATTGAATCCAGTTCTAAAACATCTCCTTCTGTGATTGTTTGGCCATTT
CTCCTCTGTTTTCTGTAGCCCATAATCTTATTCTCTGTACATTATGGGGATATATTTATCCTTAGATTGATGCAGAGAATCTGCACCTTGTTTAGCTCATAATAGAATTTTGTCCTTAGATCGAAAAGGAGGTTGTGCAGGAATTTTTGGTGTAGATTTCTGCTTTTTTTGGTTGAAGGACTTGCAATCTGTGCCAGCCC
TTGATATTTTTCGGGGGGCCTCAAGTTTCAGTCTAATTTTGATTCCTGCATTTGTATTTATACTTGATTCATGTGGTTGGATCAATTTAGGACTTCTGTGGGTTACTAAATAGATTTGGGCTAGGCTGATTTCTTCTTGTCTGTTGGGCTCTTCAAGCTCAAGCCCAAGTTTTGTGAGGATTTTGAGGATTCAAACCATC
TACCAGCACAGATCTTTGTTAAGGGAACCCTCAAGAAATGGAGAAGAGCGATCAAATATTCAGGCCACCAGAGCAGGATTTTATATTACAATGGGGGAATCGCAAGCGCCTCAGATGTTTCAAAGTACAAGTCGAAGACAAAATGAAGAGAACCACCATTCGTGTAGACAGGCGCGTTATCAGAGCCGAGAAGGAAAATC
CATCAACTCAAATGCCAGATTGCACTCAACCGAATCGCCTAGGCAGCAGGAATTCACACCCAGCGGTTGTGAAATCCACGGCCGTCGAGGGAATCAAAGTCCATAACAATGGCCATTTTTCCCCGGACAAGAATGATAAATTTCCTTTGCGAGGGAATAATGGGTGTTCCTCCACTGATGATACCAACAAGATTTCCACC
GATGCAGACACAATGCAAGATAATAAGGTCTCCAACTTGGGGGTGTTTGTGTGGCCCAAATTTGTCGTAGCCCTCTCCAGCAAGGAGAAAGAGGAGGATTTCATGGCCATCAAGGGCTCCAAGTTGCCCCTGAGGCCCAAGAAGCGGGCGAAATTTATCCAGAGAGCCTTACATCTAGTTAGCCCTGGTGCATGGCTTTG
CGAGCTGTCACAAGATCGATATGAAGTACGAGAAAAGAAAAGCACAAAAAAGgtatttattgcaaatcaagtttatcctctggacttttatcattatgtgatttgtttcatagatcttgtgacttttttttttaaattgattattttcaatttttcagCTGCTAAGCTTGACTTCTTCAATATGTGGATGGATGCAGAGA
CCAAGGGGTTTGAAGGCCATGGGAAACTTTGAGACTGACTCTGACTAGAATTCTAACGTGGCATACACATGTATCAAGCTTTCTGTGATTTCCCTTGGCATTATTTGTAGATCAGAGAGAGTGAACTACAAATGGTCTTGGTGAGATTCCACCGATTGTTGTGTGTCCTGATTACAGGGTTCATACTTCGTTCCTATTTT
TTAGTAGTAAATTTGTTATCTGTGACTGGAAATTTAATTTTAAGCCTGCAATGTTTCAGGTGCTTCTGATTGGAGGCACCTTCTCCATGTACGCAGGTGAAGTACTCCCTGTAAATCTGTAGAAATTTGTAGCTGCTATACAAATTCAAATGTTTGAATGTGTTTCAAAGAAGGACAATCCATTTTACAATAAAATGATT
CTTTCTTCAATTTTCTCCCTACATATTTTACAAAGAAGCATTGGCAGTTGCTTCAGAGCAACAGTGTCCGAGTTGTTTTATGTTTGACTTGGTAAAACACGGTGAAATATTATTCCAACTTGGTATTATAACAGTTTAAACACTGGCAGAAGCTCTATTCTATTGTTTACTGTAATTTTTCAGTTTGTCTGTGTTAATAG
GTAGTTTTGGTTGCTACCAAAGCACTTTGTGGGAATTTAACCCGTAAATGAATTTTGTTGATCACTGGTGACTCGGTGAGTTGTATATGCAATCTTACAATATCTGAATTGAGTCCTGTGATTTCTGAAGATGTGGACTGACAAAGATATGGTATTTTCTATGGTAATTGTTGTTAGATTAGGATGATTTCAGTTCATGC
CAACTT

Intron 4 GTATTTATTG ... ATGGATGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	13.73	22	2	5
A2	23.53	13	5	3
A3	15.56	19	1	6
A4	21.21	13	2	5
A5	16.67	10	2	2
A6	22.12	125	41	30
A7	23.81	72	22	23
A8	18.28	76	18	16
A9	25	72	21	27
A10	16.39	51	9	11

>TRINITY_DN40848_c0_g1_i1 from sample A7 / Example spliced isoform

GGGAGGTGGAATCATACGTGTAAGGCAAGGTAGAGCGAACGAAATTATTGGGTATTCTTGAACAGGCTTCATTCAAAATTTGAAGAATGCTCTCAGATTTTTTGGAGCTCAGAGTGATAGAATTAGGCCCATAAGATGTTTTGATCTTGATTATTGAATCCAGTTCTAAAACATCTCCTTCTGTGATTGTTTGGCCATTT
CTCCTCTGTTTTCTGTAGCCCATAATCTTATTCTCTGTACATTATGGGGATATATTTATCCTTAGATTGATGCAGAGAATCTGCACCTTGTTTAGCTCATAATAGAATTTTGTCCTTAGATCGAAAAGGAGGTTGTGCAGGAATTTTTGGTGTAGATTTCTGCTTTTTTTGGTTGAAGGACTTGCAATCTGTGCCAGCCC
TTGATATTTTTCGGGGGGCCTCAAGTTTCAGTCTAATTTTGATTCCTGCATTTGTATTTATACTTGATTCATGTGGTTGGATCAATTTAGGACTTCTGTGGGTTACTAAATAGATTTGGGCTAGGCTGATTTCTTCTTGTCTGTTGGGCTCTTCAAGCTCAAGCCCAAGTTTTGTGAGGATTTTGAGGATTCAAACCATC
TACCAGCACAGATCTTTGTTAAGGGAACCCTCAAGAAATGGAGAAGAGCGATCAAATATTCAGGCCACCAGAGCAGGATTTTATATTACAATGGGGGAATCGCAAGCGCCTCAGATGTTTCAAAGTACAAGTCGAAGACAAAATGAAGAGAACCACCATTCGTGTAGACAGGCGCGTTATCAGAGCCGAGAAGGAAAATC
CATCAACTCAAATGCCAGATTGCACTCAACCGAATCGCCTAGGCAGCAGGAATTCACACCCAGCGGTTGTGAAATCCACGGCCGTCGAGGGAATCAAAGTCCATAACAATGGCCATTTTTCCCCGGACAAGAATGATAAATTTCCTTTGCGAGGGAATAATGGGTGTTCCTCCACTGATGATACCAACAAGATTTCCACC
GATGCAGACACAATGCAAGATAATAAGGTCTCCAACTTGGGGGTGTTTGTGTGGCCCAAATTTGTCGTAGCCCTCTCCAGCAAGGAGAAAGAGGAGGATTTCATGGCCATCAAGGGCTCCAAGTTGCCCCTGAGGCCCAAGAAGCGGGCGAAATTTATCCAGAGAGCCTTACATCTAGTTAGCCCTGGTGCATGGCTTTG
CGAGCTGTCACAAGATCGATATGAAGTACGAGAAAAGAAAAGCACAAAAAAGAGACCAAGGGGTTTGAAGGCCATGGGAAACTTTGAGACTGACTCTGACTAGAATTCTAACGTGGCATACACATGTATCAAGCTTTCTGTGATTTCCCTTGGCATTATTTGTAGATCAGAGAGAGTGAACTACAAATGGTCTTGGTGAG
ATTCCACCGATTGTTGTGTGTCCTGATTACAGGGTTCATACTTCGTTCCTATTTTTTAGTAGTAAATTTGTTATCTGTGACTGGAAATTTAATTTTAAGCCTGCAATGTTTCAGGTGCTTCTGATTGGAGGCACCTTCTCCATGTACGCAGGTGAAGTACTCCCTGTAAATCTGTAGAAATTTGTAGCTGCTATACAAAT
TCAAATGTTTGAATGTGTTTCAAAGAAGGACAATCCATTTTACAATAAAATGATTCTTTCTTCAATTTTCTCCCTACATATTTTACAAAGAAGCATTGGCAGTTGCTTCAGAGCAACAGTGTCCGAGTTGTTTTATGTTTGACTTGGTAAAACACGGTGAAATATTATTCCAACTTGGTATTATAACAGTTTAAACACTG
GCAGAAGCTCTATTCTATTGTTTACTGTAATTTTTCAGTTTGTCTGTGTTAATAGGTAGTTTTGGTTGCTACCAAAGCACTTTGTGGGAATTTAACCCGTAAATGAATTTTGTTGATCACTGGTGACTCGGTGAGTTGTATATGCAATCTTACAATATCTGAATTGAGTCCTGTGATTTCTGAAGATGTGGACTGACAAA
GATATGGTATTTTCTATGGTAATTGTTGTTAGATTAGGATGATTTCAGTTCATGCCAACTT

>TRINITY_DN40848_c0_g1_i3 from sample A7 / Example unspliced isoform:

GGGAGGTGGAATCATACGTGTAAGGCAAGGTAGAGCGAACGAAATTATTGGGTATTCTTGAACAGGCTTCATTCAAAATTTGAAGAATGCTCTCAGATTTTTTGGAGCTCAGAGTGATAGAATTAGGCCCATAAGATGTTTTGATCTTGATTATTGAATCCAGTTCTAAAACATCTCCTTCTGTGATTGTTTGGCCATTT
CTCCTCTGTTTTCTGTAGCCCATAATCTTATTCTCTGTACATTATGGGGATATATTTATCCTTAGATTGATGCAGAGAATCTGCACCTTGTTTAGCTCATAATAGAATTTTGTCCTTAGATCGAAAAGGAGGTTGTGCAGGAATTTTTGGTGTAGATTTCTGCTTTTTTTGGTTGAAGGACTTGCAATCTGTGCCAGCCC
TTGATATTTTTCGGGGGGCCTCAAGTTTCAGTCTAATTTTGATTCCTGCATTTGTATTTATACTTGATTCATGTGGTTGGATCAATTTAGGACTTCTGTGGGTTACTAAATAGATTTGGGCTAGGCTGATTTCTTCTTGTCTGTTGGGCTCTTCAAGCTCAAGCCCAAGTTTTGTGAGGATTTTGAGGATTCAAACCATC
TACCAGCACAGATCTTTGTTAAGGGAACCCTCAAGAAATGGAGAAGAGCGATCAAATATTCAGGCCACCAGAGCAGGATTTTATATTACAATGGGGGAATCGCAAGCGCCTCAGATGTTTCAAAGTACAAGTCGAAGACAAAATGAAGAGAACCACCATTCGTGTAGACAGGCGCGTTATCAGAGCCGAGAAGGAAAATC
CATCAACTCAAATGCCAGATTGCACTCAACCGAATCGCCTAGGCAGCAGGAATTCACACCCAGCGGTTGTGAAATCCACGGCCGTCGAGGGAATCAAAGTCCATAACAATGGCCATTTTTCCCCGGACAAGAATGATAAATTTCCTTTGCGAGGGAATAATGGGTGTTCCTCCACTGATGATACCAACAAGATTTCCACC
GATGCAGACACAATGCAAGATAATAAGGTCTCCAACTTGGGGGTGTTTGTGTGGCCCAAATTTGTCGTAGCCCTCTCCAGCAAGGAGAAAGAGGAGGATTTCATGGCCATCAAGGGCTCCAAGTTGCCCCTGAGGCCCAAGAAGCGGGCGAAATTTATCCAGAGAGCCTTACATCTAGTTAGCCCTGGTGCATGGCTTTG
CGAGCTGTCACAAGATCGATATGAAGTACGAGAAAAGAAAAGCACAAAAAAGgtatttattgcaaatcaagtttatcctctggacttttatcattatgtgatttgtttcatagatcttgtgacttttttttttaaattgattattttcaatttttcagctgctaagcttgacttcttcaatatgtggatggatgcagAGA
CCAAGGGGTTTGAAGGCCATGGGAAACTTTGAGACTGACTCTGACTAGAATTCTAACGTGGCATACACATGTATCAAGCTTTCTGTGATTTCCCTTGGCATTATTTGTAGATCAGAGAGAGTGAACTACAAATGGTCTTGGTGAGATTCCACCGATTGTTGTGTGTCCTGATTACAGGGTTCATACTTCGTTCCTATTTT
TTAGTAGTAAATTTGTTATCTGTGACTGGAAATTTAATTTTAAGCCTGCAATGTTTCAGGTGCTTCTGATTGGAGGCACCTTCTCCATGTACGCAGGTGAAGTACTCCCTGTAAATCTGTAGAAATTTGTAGCTGCTATACAAATTCAAATGTTTGAATGTGTTTCAAAGAAGGACAATCCATTTTACAATAAAATGATT
CTTTCTTCAATTTTCTCCCTACATATTTTACAAAGAAGCATTGGCAGTTGCTTCAGAGCAACAGTGTCCGAGTTGTTTTATGTTTGACTTGGTAAAACACGGTGAAATATTATTCCAACTTGGTATTATAACAGTTTAAACACTGGCAGAAGCTCTATTCTATTGTTTACTGTAATTTTTCAGTTTGTCTGTGTTAATAG
GTAGTTTTGGTTGCTACCAAAGCACTTTGTGGGAATTTAACCCGTAAATGAATTTTGTTGATCACTGGTGACTCGGTGAGTTGTATATGCAATCTTACAATATCTGAATTGAGTCCTGTGATTTCTGAAGATGTGGACTGACAAAGATATGGTATTTTCTATGGTAATTGTTGTTAGATTAGGATGATTTCAGTTCATGC
CAACTT