sp|Q8VZ20|ASR3_ARATH ----> Trihelix transcription factor ASR3
Intron 1 GTAATGTAAA ... TGGTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 35.13 | 385 | 13 | 208.5 |
| A2 | 38.27 | 300 | 5 | 186 |
| A3 | 35.23 | 266.5 | 9 | 145 |
| A4 | 35.78 | 293.5 | 7.5 | 163.5 |
| A5 | 36.04 | 181 | 7 | 102 |
| A6 | 27.88 | 27 | 0 | 10.5 |
| A7 | 23.02 | 58.5 | 0 | 17.5 |
| A8 | 19.62 | 78 | 0 | 19 |
| A9 | 20.52 | 35 | 0 | 9 |
| A10 | 19.63 | 59.5 | 0 | 14.5 |
>TRINITY_DN117951_c2_g1_i6 from sample A2 / Example spliced isoformCTGGGAGGAGCCGCTACTGAAGACAAAATGAGGCAAGAAGATTACATTCCTACATTTCGTTTCAGCGGGTACAGTTTAGGGAACGTGAAATGACGTGGATGAGAACGAAAGACGGTCCCTCTTGGACGTGGAATCGACGGGTGTGTCATTTGGTTAGTTTCAGCCGTTCTCGTTGGTATATAATCACCCTCTCGACTTGA
CGCAGTGTTTGAAGAACTTCTTAGGAGAATAGGCAATGCTATTAACATGACAGACCCAAGCACTAGTGCCTTGATGAGAGTGGAGAGCACAGACACAGGAGGAGAAAGAGGAAGGGAGTACAGAAAGGGCATATGGACACTTGAGGAGACTCTGATCCTTTTGGAAGCCAAGAAGCAGGATGATGAGAGGAGAATGAGGG
GTGGGGATAAGGAGAGGGGCAAGACTGCAGAGTTGAGATGGAAGTGGGTTGAGAATTATTGCTTCAAGCATGGATGTATCAGAAGCCAGAACCAGTGCAATGATAAGTGGGACAACTTGCTCAGAGATTACAAGAAAGTTAGAGAATATGAGAACAAGCTTAGTCCCAATCAGTCTTCATATTGGCACCTTGAGAAGCAT
GAAAGGAAAGAAAGAGGGCTGCCCTCTAATCTTCTGTATCAGGTCTACGAAGCTCTCCATGAAGTTGTTGACAAAAGATATGCTCCCAGGATCGCACATGCCCAGGCCTCAGGAGAGAAGCCAAGCATGTCCCTTCAACAACATGAACAGCAGCATCAGCATACTTCTCAACCCAATCTACCACAGCAGCAGCAGCAACA
GCAACAG
>TRINITY_DN117951_c2_g1_i7 from sample A2 / Example unspliced isoform:CTGGGAGGAGCCGCTACTGAAGACAAAATGAGGCAAGAAGATTACATTCCTACATTTCGTTTCAGCGGGTACAGgtaatgtaaagctctgtacctttgtcatgctttctgctctgttaattgagtttttcatgctgcatttctttcaagctataggaatttatatttctaagttagtgcgtttggttggtttgcagTTTA
GGGAACGTGAAATGACGTGGATGAGAACGAAAGACGGTCCCTCTTGGACGTGGAATCGACGGGTGTGTCATTTGGTTAGTTTCAGCCGTTCTCGTTGGTATATAATCACCCTCTCGACTTGACGCAGTGTTTGAAGAACTTCTTAGGAGAATAGGCAATGCTATTAACATGACAGACCCAAGCACTAGTGCCTTGATGAG
AGTGGAGAGCACAGACACAGGAGGAGAAAGAGGAAGGGAGTACAGAAAGGGCATATGGACACTTGAGGAGACTCTGATCCTTTTGGAAGCCAAGAAGCAGGATGATGAGAGGAGAATGAGGGGTGGGGATAAGGAGAGGGGCAAGACTGCAGAGTTGAGATGGAAGTGGGTTGAGAATTATTGCTTCAAGCATGGATGTA
TCAGAAGCCAGAACCAGTGCAATGATAAGTGGGACAACTTGCTCAGAGATTACAAGAAAGTTAGAGAATATGAGAACAAGCTTAGTCCCAATCAGTCTTCATATTGGCACCTTGAGAAGCATGAAAGGAAAGAAAGAGGGCTGCCCTCTAATCTTCTGTATCAGGTCTACGAAGCTCTCCATGAAGTTGTTGACAAAAGA
TATGCTCCCAGGATCGCACATGCCCAGGCCTCAGGAGAGAAGCCAAGCATGTCCCTTCAACAACATGAACAGCAGCATCAGCATACTTCTCAACCCAATCTACCACAGCAGCAGCAGCAACAGCAACAG
Intron 2 GTACATTTAA ... AACTGTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.09 | 32 | 6 | 19 |
| A2 | 16.67 | 25 | 5 | 5 |
| A3 | 29.73 | 13 | 7 | 4 |
| A4 | 24.32 | 14 | 2 | 7 |
| A5 | 33.33 | 6 | 3 | 3 |
| A6 | 18.18 | 36 | 6 | 10 |
| A7 | 20.43 | 74 | 13 | 25 |
| A8 | 22.95 | 94 | 25 | 31 |
| A9 | 16.67 | 60 | 15 | 9 |
| A10 | 20.78 | 61 | 8 | 24 |
>TRINITY_DN42123_c2_g3_i2 from sample A8 / Example spliced isoformTCTAAACTACAATTAAATAAGATAATATAAAAATTATTTTTTTAGATGAAAACATTAAATTAAAAGCTTTAAAATACCAAACCCTAACATTAAAGAAAATAAATAAATAAACCGACCTTACACTTTAAACTCGAAATAAGAAAAACACATTCATATATATACTTCACAATCCAAGTGCAAAAAAGAGCGAGTTTTGCTTT
CTCCTGAAGATGAACCTGCTTAAAAGGTTCGAAACTGTCGAATTGAAAAATTCTACCACAGATTTCCTCTCATTCTAAGGTACAATCATAATTACAAACCAAAAAAATTATATAGGACAAGCCAACAAAACACACCAAACAAATATTCCTGAACAAACCCAAATTAATTCATTTCAAATTCTCCAAACAGACTTCTAGAG
AACATCACTAAATGGGTCCTAACTATGCTCTAAACCATGCAGATGAATTATAAATATGAATTCTAGGCATCATCACTCAATGGGTCTTAATTATTTTTGTAAACCCATGCAGATACATTATAATATGCAGTTTGGGAGCTCTTCTAAACCCCATAATCCCTTTGTCTCTTCTTCACAGATTAAATTATGCAAAAAGGAGG
AGCAGCATATAAAGGATAAAATCTCAAAGTCCTTGAAATAATAAACAAATTCAAGTTAAATAAAAAGTAGAAAGGAAATAAAATAAAATAATGAAAAGGACCGAAAGCGACGGGAGTAAAGCTGCCCTGCCGTTGACTAAGGTTTGACTGGCCCGTGCAGTACTTGCTTTGTAACAGCACGGCCCATGAAAATCAAATCA
AACATCAAAATCAATAACATGCTTTTAGTTAAATTAATAGCTCACTTAATTCACAAAAAATCCTAAATTATTTAAGTATTATAGGCCTAATTTATAACTAGTTTAATCTCGCGGACCTCATCTTTTTATTTAAACGCGTTAAATGCGTAGGGAACCCCTTCCTCCGTGGGCCTTCCAGGGTATTTCTGCTGAGTTCCAGA
GCCTCCCAGATGCTTAACCCGACCTCAGATTCTGGATTTTATCATTTGGGTCTGTTCAATTCCTCCCATTTACTATACCCACGTTAATAGTTTAAACGAATTCATGGTGTTTCTAATAAATGAATTTTCATGGTGTTTTTGATGGGTTTCAGTGGGGTTGCGTGAGACCTGAGTATTGTAATTATATGGATTTTATTATT
TTTGGGAGTCTGTTTATGCCAACATGTGATTTGGGTTCGATCAGGATGTGGTAGAATCCATGAAATGATGCAGAGTTATGGAGCTGCATGAGCCTTTTGAGGGTATTGAGTTTTATTTTAGCTCATGAGTGGTTCTGAGCACTGAAAGACGAGAAATGGTGATGGGGATTTGTAATTATGAATGCTTCAATACTGCAGGC
TTACAACATCCATGCTTCCTGCAGGGTAGGAGCAGCCATCTTGCATAGTTCCAGCACGTGCAAATGGTCAATGGTGCCATCATTTTGCAGTGAAAATTGTACCATAGAAATCATAATAGCCAGGTTTTATAGCTTAATACCTATGGTCACTGGTGTATTAGGATGGAGTGGATTCCAATGCAGTAAGCATTGTTTGCAGT
AATTGAGTGGGTATATTGGGTCTGGGTTTTTGATGGTGGCATTGGGAGCTGAGCCCAGATTCAAATCACTATGTCTTTTAGTCAATTATAATTAGCGTTGGTGATGAGTTGGGTTGTATCTAGTTGCCCAAATAGGCCACTGGTATTATTGGATCATATGCTCCAAGCCCAAAAGTTTACAGAATCAATATGAAACTTGA
GCATGTGTATCAATATGGTTGTAACATGGGAGAATCAATGTCTTCTGAAAGATCTAGACCAAACCCAATTGCTAGATTTATATACAAAAATGGTGTAGTATAAGCTAGGGAATTGGGATAAGATTTCTGTAGAGAGATATACTTGAGCATTTGTTTTTTTTTCTGCAGTGTTTGAAGAACTTCTTAGGAGAATAGGCAAT
GCTATTAACATGACAGACCCAAGCACTAGTGCCTTGATGAGAGTGGAGAGCACAGACACAGGAGGAGAAAGAGGAAGGGAGTACAGAAAGGGCATATGGACACTTGAGGAGACTCTGATCCTTTTGGAAGCCAAGAAGCAGGATGATGAGAGGAGAATGAGGGGTGGGGATAAGGAGAGGGGCAAGACTGCAGAGTTGAG
ATGGAAGTGGGTTGAGAATTATTGCTTCAAGCATGGATGTATCAGAAGCCAGAACCAGTGCAATGATAAGTGGGACAACTTGCTCAGAGATTACAAGAAAGTTAGAGAATATGAGAACAAGCTTAGTCCCAATCAGTCTTCATATTGGCACCTTGAGAAGCATGAAAGGAAAGAAAGAGGGCTGCCCTCTAATCTTCTGT
ATCAGGTCTACGAAGCTCTCCATGAAGTTGTTGACAAAAGATATGCTCCCAGGATCGCACATGCCCAGGCCTCAGGAGAGAAGCCAAGCATGTCCCTTCAACAACATGAACAGCAGCATCAGCATACTTCTCAACCCAATCTACCACAGCAGCAGCAGCAACAGCAACAGCCACCGCCAACACATCAACAGATTCCTACT
CAACAACAACAACAACCAGCTTCAGGTGGCTGCTCTGTTGATATATCTGACAGTTCTGAGAGTGATGGGAGTGAACTTCCACATTCACCAGCTAAGAGGAGGAGGGTGTGGAGAAGCATACATGGCTTAGCCCCTGCCATGTCAAAGTGTACAAAAGACTTAGCCCAAATACTGATGAAATGTGAAGAAAAGAAAGATAA
GAGGCACCTGGATATTTTGGGAGTAGAAGAAAGGAAGTTGAACATGGAACAGATGAAGACAGAGATAAGTAAACAAGGTATTGCAGGCCTCATACATGCTGTAGACAATCTCACTAGTGCTATTCTTACTTTGGCCTCTGAAAAAACTGTCACTAATGATTAAGATTATTCAATGAAGGCTAGTAGACAAGGTATCTCAG
GCCTCAGAAGTGCTGCAAACAATCTCGTCAATGCTGTTCTTACTTTGGCCTTTGACAAAACTGATGCTCCTGATTATGGTTATTCAAGGAAGGTTTAGGATACTATTTCAGTAATGTATGGTTGTCTTAGTACTGCTAACTAGGAATTCTTTCAGGGAATGTCTGTTGTATTGTGAACTTACCAAATGATAATACCTAGC
TCTAGGTGGCATAGAGATATGCGGATAACAATCCCTGTTTTCATATTCAATGATTCCAATGCTATCATTTTTCATGTAATGTAATTGATCTTCTTGCATTGTGGGCAACTTTATTCACAGAAGCCCACTTAATCTTTCAGTTGAAGAATTTCAGTCAAATGTTTGCCATCTGAGCCGGTTGTATTTGGTTCCATTTTTAC
TGTGACACCTTTTTATATTGATGTTAAACTCGTCTAGAATTGCTAAAGATTAGAATGTTATTTTATATGCTTGTACTGTTTATTTTTTATGTAACTAGAGATTGAATCTCAACCAATTTTAC
>TRINITY_DN42123_c2_g3_i6 from sample A8 / Example unspliced isoform:TCTAAACTACAATTAAATAAGATAATATAAAAATTATTTTTTTAGATGAAAACATTAAATTAAAAGCTTTAAAATACCAAACCCTAACATTAAAGAAAATAAATAAATAAACCGACCTTACACTTTAAACTCGAAATAAGAAAAACACATTCATATATATACTTCACAATCCAAGTGCAAAAAAGAGCGAGTTTTGCTTT
CTCCTGAAGATGAACCTGCTTAAAAGGTTCGAAACTGTCGAATTGAAAAATTCTACCACAGATTTCCTCTCATTCTAAGGTACAATCATAATTACAAACCAAAAAAATTATATAGGACAAGCCAACAAAACACACCAAACAAATATTCCTGAACAAACCCAAATTAATTCATTTCAAATTCTCCAAACAGACTTCTAGAG
AACATCACTAAATGGGTCCTAACTATGCTCTAAACCATGCAGATGAATTATAAATATGAATTCTAGGCATCATCACTCAATGGGTCTTAATTATTTTTGTAAACCCATGCAGATACATTATAATATGCAGTTTGGGAGCTCTTCTAAACCCCATAATCCCTTTGTCTCTTCTTCACAGATTAAATTATGCAAAAAGGAGG
AGCAGCATATAAAGGATAAAATCTCAAAGTCCTTGAAATAATAAACAAATTCAAGTTAAATAAAAAGTAGAAAGGAAATAAAATAAAATAATGAAAAGGACCGAAAGCGACGGGAGTAAAGCTGCCCTGCCGTTGACTAAGGTTTGACTGGCCCGTGCAGTACTTGCTTTGTAACAGCACGGCCCATGAAAATCAAATCA
AACATCAAAATCAATAACATGCTTTTAGTTAAATTAATAGCTCACTTAATTCACAAAAAATCCTAAATTATTTAAGTATTATAGGCCTAATTTATAACTAGTTTAATCTCGCGGACCTCATCTTTTTATTTAAACGCGTTAAATGCGTAGGGAACCCCTTCCTCCGTGGGCCTTCCAGGGTATTTCTGCTGAGTTCCAGA
GCCTCCCAGATGCTTAACCCGACCTCAGATTCTGGATTTTATCATTTGGGTCTGTTCAATTCCTCCCATTTACTATACCCACGTTAATAGTTTAAACGAATTCATGGTGTTTCTAATAAATGAATTTTCATGGTGTTTTTGATGGGTTTCAGTGGGGTTGCGTGAGACCTGAGTATTGTAATTATATGGATTTTATTATT
TTTGGGAGTCTGTTTATGCCAACATGTGATTTGGGTTCGATCAGGATGTGGTAGAATCCATGAAATGATGCAGAGTTATGGAGCTGCATGAGCCTTTTGAGGGTATTGAGTTTTATTTTAGCTCATGAGTGGTTCTGAGCACTGAAAGACGAGAAATGGTGATGGGGATTTGTAATTATGAATGCTTCAATACTGCAGGC
TTACAACATCCATGCTTCCTGCAGGGTAGGAGCAGCCATCTTGCATAGTTCCAGCACGTGCAAATGGTCAATGGTGCCATCATTTTGCAGTGAAAATTGTACCATAGAAATCATAATAGCCAGGTTTTATAGCTTAATACCTATGGTCACTGGTGTATTAGGATGGAGTGGATTCCAATGCAGTAAGCATTGTTTGCAGT
AATTGAGTGGGTATATTGGGTCTGGGTTTTTGATGGTGGCATTGGGAGCTGAGCCCAGATTCAAATCACTATGTCTTTTAGTCAATTATAATTAGCGTTGGTGATGAGTTGGGTTGTATCTAGTTGCCCAAATAGGCCACTGGTATTATTGGATCATATGCTCCAAGCCCAAAAGTTTACAGAATCAATATGAAACTTGA
GCATGTGTATCAATATGGTTGTAACATGGGAGAATCAATGTCTTCTGAAAGATCTAGACCAAACCCAATTGCTAGATTTATATACAAAAATGGTGTAGTATAAGCTAGGGAATTGGGATAAGATTTCTGTAGAGAGATATACTTGAGCATTTGTTTTTTTTTCTGCAGTGTTTGAAGAACTTCTTAGGAGAATAGGCAAT
GCTATTAACATGACAGACCCAAGCACTAGTGCCTTGATGAGAGTGGAGAGCACAGACACAGGAGGAGAAAGAGGAAGGGAGTACAGAAAGGGCATATGGACACTTGAGGAGACTCTGATCCTTTTGGAAGCCAAGAAGCAGGATGATGAGAGGAGAATGAGGGGTGGGGATAAGGAGAGGGGCAAGACTGCAGAGTTGAG
ATGGAAGTGGGTTGAGAATTATTGCTTCAAGCATGGATGTATCAGAAGCCAGAACCAGTGCAATGATAAGTGGGACAACTTGCTCAGAGATTACAAGAAAGTTAGAGAATATGAGAACAAGCTTAGTCCCAATCAGTCTTCATATTGGCACCTTGAGAAGCATGAAAGGAAAGAAAGAGGGCTGCCCTCTAATCTTCTGT
ATCAGGTCTACGAAGCTCTCCATGAAGTTGTTGACAAAAGATATGCTCCCAGGATCGCACATGCCCAGGCCTCAGGAGAGAAGCCAAGCATGTCCCTTCAACAACATGAACAGCAGCATCAGCATACTTCTCAACCCAATCTACCACAGCAGCAGCAGCAACAGCAACAGCCACCGCCAACACATCAACAGATTCCTACT
CAACAACAACAACAACCAGCTTCAGgtacatttaatccctggtcagttcaatatcaaatgctattattcagtctgagatttagttcacggggttgattttgtttggatgttaacaattacatcttacctagaaagacaaagaaagaacaaaaacgtgcgtgttctagtcatcgaagggtgtagtattctccatgttgaaa
attgggcaggatgtgaatcgaacccaggatctgcccctggctggtgattgctatatttaacaacccccttcaagtcacactttggctcattcctcctacccaccaccattcaactcggttctgataccatgttaacacttggatggactaggaattgaatccaggacctttccctggctggtgggctgctctaccactga
gctacatatgcccctttcatgatgggcacccattccagttcgacattaagttgtggattgcaatcttcaacttaggactataatatccattggatttatttgatgtacaagtctctgtctgtctcgtgggcgggattgccactaatcttaaaatgtaaatatttaccttttggtctggggcatgaatcagtgctagtcct
aattaaacttgaagacgcttatataatctttcgatggattatctatgttcttaatgtgctaagaaaattcatatagacattctagaccagtgatctaggatttgaagacaagctaaaataccatctcattgtccattacttagatctagtcaatctactgttttaccgtccaataaaccagaatcagaacgaaaaactag
accagagacctaagtttctgatgatacactaatcaatgatgtggcagtctagtaactgagataaagcatttccaagattagtgcagtagcagacgaagcattgacacacataagaaatagacgacatttggttatgtatgactagatgctccctaactgcactctatcaaataagtcatctggtaatattactacgatta
ttttgatcccagtcaaatgcggcagttgacaccagaccctcaaagtttcttataaacacaattgatgcgatatgcattggttttcatagtgttgatagggggagtgtttctctttgcactattttcaggttatttgatgtattttttccttttgaactgtgtagGTGGCTGCTCTGTTGATATATCTGACAGTTCTGAGA
GTGATGGGAGTGAACTTCCACATTCACCAGCTAAGAGGAGGAGGGTGTGGAGAAGCATACATGGCTTAGCCCCTGCCATGTCAAAGTGTACAAAAGACTTAGCCCAAATACTGATGAAATGTGAAGAAAAGAAAGATAAGAGGCACCTGGATATTTTGGGAGTAGAAGAAAGGAAGTTGAACATGGAACAGATGAAGACA
GAGATAAGTAAACAAGGTATTGCAGGCCTCATACATGCTGTAGACAATCTCACTAGTGCTATTCTTACTTTGGCCTCTGAAAAAACTGTCACTAATGATTAAGATTATTCAATGAAGGCTAGTAGACAAGGTATCTCAGGCCTCAGAAGTGCTGCAAACAATCTCGTCAATGCTGTTCTTACTTTGGCCTTTGACAAAAC
TGATGCTCCTGATTATGGTTATTCAAGGAAGGTTTAGGATACTATTTCAGTAATGTATGGTTGTCTTAGTACTGCTAACTAGGAATTCTTTCAGGGAATGTCTGTTGTATTGTGAACTTACCAAATGATAATACCTAGCTCTAGGTGGCATAGAGATATGCGGATAACAATCCCTGTTTTCATATTCAATGATTCCAATG
CTATCATTTTTCATGTAATGTAATTGATCTTCTTGCATTGTGGGCAACTTTATTCACAGAAGCCCACTTAATCTTTCAGTTGAAGAATTTCAGTCAAATGTTTGCCATCTGAGCCGGTTGTATTTGGTTCCATTTTTACTGTGACACCTTTTTATATTGATGTTAAACTCGTCTAGAATTGCTAAAGATTAGAATGTTAT
TTTATATGCTTGTACTGTTTATTTTTTATGTAACTAGAGATTGAATCTCAACCAATTTTAC