sp|O24493|MC1_PINRA ----> Male-cone protein 1

Intron 1 GTAAGTGCAG ... GTTGTGGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	10.55	447	122.3	53.7
A2	11.28	544	116	70.3
A3	12.47	448	79.7	65.5
A4	9.48	454	103	48.5
A5	14.49	366	67	63.7
A6	16.43	5637	858.3	1153.3
A7	15.95	2042	351.7	402.7
A8	16.59	2348	382	486
A9	15.11	3776.7	647	696.2
A10	15.44	1431	246.3	271

>TRINITY_DN86993_c0_g1_i2 from sample A1 / Example spliced isoform

ATTAATCTCTTCTCTGCCATCTACTAATCATCCTCGTACTCTCCTGCCCCATTACCAAAGATGGCTGCACCCAGATCATCAGCTAAATTGGCCGCACTCTTGGCAATACTGTTCTTAGTTGCAGCTGCGCAGGCTCAAGACTGCTCAAACGCCATGGAGAAATTGTCTCCATGCACTTCAGCAGTCGGACTTGCTGGCAG
TGGAGTGAAGCCCTCCTCTGAGTGCTGTGCTGCCCTCCAAGGAACCAGCAATGGCTGCATCTGCAAGTCTGTGAGAGCCGTGGTATCACTTCCTGCTAAGTGCAATCTCCCAGCCATAACCTGCTCTGGATCTCGCTGAAGGCTCTCTATGATGGCGATACTCAGATCGTGGATATCTTTAAGATTTTCAGTATACATGT
GATAGAATAAATTCTCATAATCTGAGATATCTATATAGCGATTTTCAGTATCAGATCGTCTCACTAATATATTAAGTGACAATAAAATTCTCGGATTCTGAGATACAAATACAGGCACTGAGTGAATGTTGTTGGATCAGGATGCTTGAATTTCGATCATAATAATAATAATAATATGGTTTTTGGGAAA

>TRINITY_DN86993_c0_g1_i1 from sample A1 / Example unspliced isoform:

ATTAATCTCTTCTCTGCCATCTACTAATCATCCTCGTACTCTCCTGCCCCATTACCAAAGATGGCTGCACCCAGATCATCAGCTAAATTGGCCGCACTCTTGGCAATACTGTTCTTAGTTGCAGCTGCGCAGGCTCAAGACTGCTCAAACGCCATGGAGAAATTGTCTCCATGCACTTCAGCAGTCGGACTTGCTGGCAG
TGGAGTGAAGCCCTCCTCTGAGTGCTGTGCTGCCCTCCAAGGAACCAGCAATGGCTGCATCTGCAAGTCTGTGAGAGCCGTGGTATCACTTCCTGCTAAGTGCAATCTCCCAGCCATAACCTgtaagtgcagtgctgtaatttctttttgctcatttgggttgttgaaattcttcagaactaatttgatttgtaatttat
attgcttttaatattgttgtggcagGCTCTGGATCTCGCTGAAGGCTCTCTATGATGGCGATACTCAGATCGTGGATATCTTTAAGATTTTCAGTATACATGTGATAGAATAAATTCTCATAATCTGAGATATCTATATAGCGATTTTCAGTATCAGATCGTCTCACTAATATATTAAGTGACAATAAAATTCTCGGATT
CTGAGATACAAATACAGGCACTGAGTGAATGTTGTTGGATCAGGATGCTTGAATTTCGATCATAATAATAATAATAATATGGTTTTTGGGAAA