NA ----> NA

Intron 1 GTATTTTTAT ... ATCACCAAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	100	0	0	3
A2	66.67	1	1	3
A3	75	1	1	5
A4	100	0	1	2
A5	100	0	2	0
A6	77.78	2	10	4
A7	69.23	2	4	5
A8	82.86	3	19	10
A9	79.66	6	24	23
A10	88.57	2	20	11

>TRINITY_DN44738_c1_g1_i9 from sample A6 / Example spliced isoform

CGGGTGCAAACCATATATCCGTTGAAGGATGAATATATATTTCTAAAATTCTCCATTCTCCCCTATCCATGTCTGTCTGGTGTGTCTGTGCAGAGTCTGAGTCTGAGTCTGTGTTTGGGGAAAATTGTGATAGAGGAGGAGTTCGGGCCGGATTGGCATCAACCTAAGGAGCAAATGGAGGAGGCAGCTCACCTATTCAA
TATGATGATTCTTTTCTCTGTTCTCTGCTCTCGGAAGACCTTTCCAGATTCCAGGTACATTTTACGGATCTTTTCTCTGTTCTCTGCTCTCCTCTCCCTACTGCTCGAACCCTACTTCTGTGTATGTGTTGAATCTGAGGTTGAGGTTATTTTGTTAATGAATGGCAATGGTGGTTCTCAATACCACAGGCCTCAATTAT
AGGCTAAGGCTATTCCACTGCTACCAAACGGCACTCCAAATGACGGCTCTGTTCTGTTCTGATCTGATCTTTCCATGAAATATTGAATAAGGTATTTCAATTGATTTGCAGAATCTACCTACTCCTCGAACCCTATTCCTGTGTATGTGTTGAATATGAGGTTGAGACTATTATGTTAATGGAACCCTATTCCTGTGTAT
GTGT

>TRINITY_DN44738_c1_g1_i1 from sample A6 / Example unspliced isoform:

CGGGTGCAAACCATATATCCGTTGAAGGATGAATATATATTTCTAAAATTCTCCATTCTCCCCTATCCATGTCTGTCTGGTGTGTCTGTGCAGAGTCTGAGTCTGAGTCTGTGTTTGGGGAAAATTGTGATAGAGGAGGAGTTCGGGCCGGATTGGCATCAACCTAAGGAGCAAATGGAGGAGGCAGCTCACCTATTCAA
TATGATGATTCTTTTCTCTGTTCTCTGCTCTCGGAAGACCTTTCCAGATTCCAGGTACATTTTACGGATCTTTTCTCTGTTCTCTGCTCTCCTCTCCCTACTGCTCGAACCCTACTTCTGTGTATGTGTTGAATCTGAGGTTGAGGTTATTTTGTTAATGAATGGCAATGGTGGTTCTCAATACCACAGGCCTCAATTAT
AGgtatttttattactttttcctctttagctcttcagctccgctttactctgaaaaaacatagttcaacccttatccctttcgcttgagtcatttctattattttcttcagtcatttctattttcttccgttagcttctatttctttggatttttaaatttcttaaatcgaatgtgtttgtttgagatctctatctttct
gtttgagatcaccaaagGCTAAGGCTATTCCACTGCTCAAACCAAACGGCACTCCAAATGACGGCTCTGTTCTGTTCTGATCTGATCTTTCCATGAAATATTGAATAAGGTATTTCGATTGATTTGCAGAATATGAGGTTGAGGTTGAATAAGGTATTTCGATTGATCTTTCCTGTGTATGTGTTGAATATGAGGTT