NA ----> NA
Intron 1 GTACTACAGC ... GTGTCTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 38.25 | 156.2 | 108.6 | 85 |
| A2 | 39.29 | 108.5 | 69 | 71.4 |
| A3 | 33.21 | 89.8 | 37.3 | 52 |
| A4 | 48.69 | 77.4 | 72.8 | 74.1 |
| A5 | 43.04 | 36.8 | 25 | 30.6 |
| A6 | 40.36 | 320 | 198.7 | 234.4 |
| A7 | 39.01 | 486.1 | 307 | 314.9 |
| A8 | 39.62 | 399.8 | 256.4 | 268.4 |
| A9 | 41.24 | 415.3 | 282 | 301 |
| A10 | 38.97 | 374.3 | 235.8 | 242.3 |
>TRINITY_DN114832_c0_g1_i3 from sample A1 / Example spliced isoformAGCGAAGGTTCCTGCGGGTCGAGTGTCCAGTACAATACCTTGGAAACTACGTAAGTGGAGAGGAGGGTAGTGTTTTTGATTGTGTCGCTCAAATTGGACCATGCTCTCCATTGCAGTTAGCACGGCGTATGCGTTGTCGTTCGTAAATGATCGTAGCATCAGCGTTGCAAGGGCAAGCGCAAGGGGAACGGGAAAGGCAT
GGGTCGATAAGCGGTTGAGGTTTTCATTAAATGTGGAAGGCTCTGGACGCGTAACAAGTAGAGCTGTGCAGAAGAGGAGGAGAAGTCTTGATATCGAGGAGGATGTTCCAGTACAAAATGGATTCTTGATTCCTGCCCGCTCTCATTTGCTTCAAGTGGCAGTGGATATCGATGAAGTTCTTGGCAGCTTTCTCAACTCG
TTGAACACTTTCATAGTGGAGACATACCGGGCCCATTATGATCTTTCAGAGTACTATGTCTATGACTTCATGAAGATTTGGAAATGCTCACAAGCAGAAGCTAATTCTCGGGTCCATGCTTTTTTTGAATCAAAGCATTTTAACAGTGGCATTGTACCAATCCCTGGTGCTTATAAATCTCTCAGTCAATTGTCATCATA
CTGCAATCTGGTGGTCGTTACGTCACGTCAGCATGTCATCAGAGAGCCTAGCCTAGAGTGGATCTCAACACATTACAAAGGAATATTTAGTGAGATTCATTTTGGAAATCACTTTGCACTGGAAGGACAAGCGAAATCAAAATCTGAAATTTGCAAGTCTCTAGGTGTGCAGTTCCTAATAGATGACAATCCAAGATATG
CAGTGGAGTGTGCAGAAGAGGGCATTGAGGTGCTTTTGTTTGATTTAGATTATAGTTATCCATGGAGCAAGACCCCAGACGGTCCTTCTCATCCCCTCATTACAAGGGTTCATAATTGGCAGGAAGTTGAGCTAAAATTAATGGCTCGTAGACTTTCTGCACCATGAATGATTTCAATGAAACTTGTCTTTGGCATCTGA
CAAAATCCTAGGGAAGTTCAGTTTTATTGAGTGGGGATATTACAACTAAATTGAGAACTAGGGTCTTTTCTAAGCACAGACTTCGAAGGAGAGTGCTCTTATACATGAAAGTGTAGTGCATCTAAATTTTTGGGAGCACATTGTTAGGGAAAACTATATGAGCTTAATGCTCAGCTCTTATCAATCTCTTGGAAGTATGA
CATTGTTTGTCTAGCTCATTTTCACTGTGTTTTGTTTAATGCAGATGATTCTCTTTTTACTTGCCATATTCTCAGGGAAAAAGACTGTTCAGAATTTATAGACTAAAGAAAAATATGTTTTAGCTGTCATTGTGGGTCAATGTCCTACAAGCAAATTCAGATGGATCTCTTTTTACTTGCTGTATTCTTGAGGCAC
>TRINITY_DN114832_c0_g1_i1 from sample A1 / Example unspliced isoform:AGCGAAGGTTCCTGCGGGTCGAGTGTCCAGTACAATACCTTGGAAACTACGTAAGTGGAGAGGAGGGTAGTGTTTTTGATTGTGTCGCTCAAATTGGACCATGCTCTCCATTGCAGTTAGCACGGCGTATGCGTTGTCGTTCGTAAATGATCGTAGCATCAGCGTTGCAAGGGCAAGCGCAAGGGGAACGGGAAAGGCAT
GGGTCGATAAGCGGTTGAGGTTTTCATTAAATGTGGAAGGCTCTGGACGCGTAACAAGTAGAGCTGTGCAGAAGAGGAGGAGAAGTCTTGATATCGAGGAGGATGTTCCAGTACAAAATGGATTCTTGATTCCTGCCCGCTCTCATTTGCTTCAAGTGGCAGTGGATATCGATGAAGTTCTTGGCAGCTTTCTCAACTCG
TTGAACACTTTCATAGTGGAGACATACCGGGCCCATTATGATCTTTCAGAGTACTATGTCTATGACTTCATGAAGATTTGGAAATGCTCACAAGCAGAAGgtactacagcctatggtacattgtgtctttagCTAATTCTCGGGTCCATGCTTTTTTTGAATCAAAGCATTTTAACAGTGGCATTGTACCAATCCCTGGT
GCTTATAAATCTCTCAGTCAATTGTCATCATACTGCAATCTGGTGGTCGTTACGTCACGTCAGCATGTCATCAGAGAGCCTAGCCTAGAGTGGATCTCAACACATTACAAAGGAATATTTAGTGAGATTCATTTTGGAAATCACTTTGCACTGGAAGGACAAGCGAAATCAAAATCTGAAATTTGCAAGTCTCTAGGTGT
GCAGTTCCTAATAGATGACAATCCAAGATATGCAGTGGAGTGTGCAGAAGAGGGCATTGAGGTGCTTTTGTTTGATTTAGATTATAGTTATCCATGGAGCAAGACCCCAGACGGTCCTTCTCATCCCCTCATTACAAGGGTTCATAATTGGCAGGAAGTTGAGCTAAAATTAATGGCTCGTAGACTTTCTGCACCATGAA
TGATTTCAATGAAACTTGTCTTTGGCATCTGACAAAATCCTAGGGAAGTTCAGTTTTATTGAGTGGGGATATTACAACTAAATTGAGAACTAGGGTCTTTTCTAAGCACAGACTTCGAAGGAGAGTGCTCTTATACATGAAAGTGTAGTGCATCTAAATTTTTGGGAGCACATTGTTAGGGAAAACTATATGAGCTTAAT
GCTCAGCTCTTATCAATCTCTTGGAAGTATGACATTGTTTGTCTAGCTCATTTTCACTGTGTTTTGTTTAATGCAGATGATTCTCTTTTTACTTGCCATATTCTCAGGGAAAAAGACTGTTCAGAATTTATAGACTAAAGAAAAATATGTTTTAGCTGTCATTGTGGGTCAATGTCCTACAAGCAAATTCAGATGGATCT
CTTTTTACTTGCTGTATTCTTGAGGCAC