NA ----> NA

Intron 1 GTATGTTTTA ... TTTGTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	22.79	166	3	49
A2	31.82	165	0	77
A3	34.09	174	10	90
A4	34.55	72	0	38
A5	33.33	44	0	22
A6	33.22	1160	0	577
A7	32.26	1178	1	561
A8	31.4	1549	0	709
A9	29.07	1127	1	462
A10	29.64	890	5	375

>TRINITY_DN48353_c0_g3_i3 from sample A10 / Example spliced isoform

ATTCCAACTTGCTAAAAATCCGATTTAAACCGGCCCTTCCTCCCACTAACCCTAACCCTAGGGCTTGAAGGGGTCGGCTCAACCACACATGCAATAAGAGTTGAATAGTGATTGAGTTTTGTAAGATTCCTATAAAAGGGGTTGAAGAGCGCTAGTAAGAAGGGTTGAAAAGCGCTCGTCGGAAAGTAACTAACAGGAAA
CAGGAGCGGGGAAAAACTCGAGGGAAGAAGAGCCACAGATTTGGTTTTATTATGCCCACCTTACCGAGTGTCAACCGACCGTGATTTCTGGCTCTGCATTTGAGTTTTCCAGGGAAGCCGAGAGATCCCATTCTATCCAAGTGGGTACTGAAGAAACATCGCGGAAAGCATTACTGAGGCTCTGAAACTGAAGATTGAAT
TCATTTTCTGCTCTGGGCGGGGCAGATCGGAGCAGGACTAGCGACCCTTTTGTTTTTTCTCGCTTAAGGAAGATGGGAAGAGGCAAATTCAAGGGCAAGCCCACCGGGCGCAGGCACTTCTCAACTGTTGAAGAAATACGTGCTGGGACTTCTGCCAAACCTCGTGGCTTTAGGCAGGAAGAAGAGCCGAGTGAAGAGGA
GGAAGTAGAAGAATCATCAGAAGAAGAATCTGAAGAATCGGCAAATGAAAAAAAAAAGGGAACTCAGGGTCTCATTGAGATTGAGAATCCTAATATTGCTAAGCCAAAGAACATCAAAGCTCGAGATGTTGATATTGAGAAAACAACAGAGCTATCAAGACGGGAGAGGGAAGAGTTAGAAAAGCAAAAGGCCCATGAAC
GATACATGAGGTTACAGGAACAAGGAAAAACAGAACAGGCCAGGAAAGATTTGGAACGCTTAACTCTAATCAGACAGCAACGGGCAGATGCTGCGAAGAAGAGGGAGGAAGAGAAGGCTGCAAGAGACCAGAAAAAGGTTGAGGCGCGGAAATGAGTTTTCTCGCTATGTAGTTTATTAACTACTAGCTGTACTATCAAG
CTGGTTAATAGTAAATACTTATTGGCTCATACAGAGACGTTTCAAATCTTAGTTGCGATGTTTAATACTTATTTAAATAGTGAATACCTTTGAGATAACAGCTTACTGGTGAATTGAGATTTTTAATACTTATTTAGTCATACATAATCATTTCAAAATATAGTTGCGTTTTGTTTTCGTTACTTATGGGTCATACATAG
TATTTTCAAAATTTAGTTTTAGCAACTCCCTTAATATCAATATTGTATTAAGGCACCCTCATGCATAAATGAATGTTGAAAGTTCCACATTTTTATGGATTGTATGAATCTGTATTGCAAACCTA

>TRINITY_DN48353_c0_g3_i1 from sample A10 / Example unspliced isoform:

GAAGAGGGAGGAAGAGAAGGCTGgtatgttttatatttgtgtttagctgctttgacagaattattgaatgcctattgtttgcatatactggtatgctgattctcttgcttttttgatttgtttcagCAAGAGACCAGAAAAAGGTTGAGGCGCGGAAATGAGTTTTCTCGCTATGTAGTTTATTAACTACTAGCTGTACT
ATCAAGCTGGTTAATAGTAAATACTTATTGGCTCATACAGAGACGTTTCAAATCTTAGTTGCGATGTTTAATACTTATTTAAATAGTGAATACCTTTGAGATAACAGCTTTACTGGTGAATTGAGATTTTTAATACTTATTTAGTCATACATAATCATTTCAAAATATAGTTGCGTTTTGTTTTCGTTACTTATGGGTCA
TCCCTTAATATCAATATTGTATTAAGGCACCCTCATGCATAAATGAATGTTGAAAGTTCCACATTTTTATGGATTGTATGAATCTGTATTGCAAACCTA