NA ----> NA
Intron 1 GCATTGCAGC ... GTTGACCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 45 | 5 | 0 | 4 |
| A2 | 40.18 | 4.5 | 0 | 3 |
| A3 | 33.34 | 3 | 0 | 1 |
| A4 | 50 | 5 | 0 | 5 |
| A5 | 0 | 1.5 | 0 | 0 |
| A6 | 28.75 | 8.5 | 1 | 3 |
| A7 | 33.27 | 18.5 | 0 | 9 |
| A8 | 34.09 | 46.5 | 1 | 24 |
| A9 | 32.47 | 17 | 0 | 8 |
| A10 | 44.5 | 7.5 | 0 | 6 |
>TRINITY_DN37449_c0_g2_i4 from sample A6 / Example spliced isoformGTGTGCTTAAAAAGAGAGAGAGGGAGGAACAGTTGCAAAACACACCAAACCTCTGGTTTGAATTCAACAATGAAAGGCAGAAAGAGGAGAAGCCATTCTTCTTCTTCAGATTCTGATTCAGATCCAGATTTTGACTGCAGCGAAGAAGATTTCTCATGTTCACCAACACTTCCCAGCAAAAAATCACAACCCAAAAATGC
AAATCCCACTGCCACTCAACAGAGGAAGAAGCTAACCCTGCCCAAGGCTCCCAAGGCACAAAGATCAGCTGGAAGATATAGAAATGAAGAGAAAAGGCACGCCAGTAAGACTGAGATCGATGTTTTTGATTCGGAGGACGAAGTACTTCACAGCAACAAAAGCAAAGGTTTTGATATGCTGGTAAAAGCTGCTTTTCATA
ATGATGGAGGGCAGTTAACTTCACTAGACAGTTGCCCAACCAAGGGAGTTAGCATCACAGAAGAGGGAACCACCAAGGAAGATTGTAGTAGTGAAAAAGAAGCAGAAGATTATTCATTGCCCGAAGATGAACAGGATGATGATGAAAATGAGGACTCTTGTGCTGATGACTCTGATGGCTTGGGAAAACATATGATAAAA
CAGAAGAATTGCCAAAGTCACTCACCTGTAGCATTAGAACAGAACAAAATGGATATCGTTGTATCTCATATTAAGAAAGCCCGAAGTAGGCTTAGACATCAATGGACAAGTCCTATATCTGAGACCACTGAAAAAAATTCAGCATTACCAGCTATAACACCGGATATTGTGAAGAAATCTCTGGAACTATTGACTCCTGA
ACCTCCAAAAAGCATCAAAGAGCCTGTTAAATTTACTTCAACCAAAAACAAAGCAAGTGGCGAATCAGAAAGTGATAAAATGTATGGTTGTTGAATGATGTACATGAAGAGTGTTACATTGACAAGGCTCAAACATCCTGCGATTCCAGTCATCTTCAGTTCCACATCGGCGGGTTTTAGGCTTATCTAGACGAGTTCGC
CCAGCACCTTTGCATCCATATCTATCGAAGACTGATAAATAACAGTTAAGTTATTCATTGCAAGTATCATTCAGGTGATAATCTCCACAATTGTATGAAAGGGTCCTGGATATATTTGTATATGAAATGTGCAGTGCTATTTCAAGGAAGATGTTGAATATACATTGAAATCCTTATTGTTTAGAAGAGCATTTGTATAG
TGTAGCCTGCATAATAACTCATATAATTATTGTTGGTCAACTACATCCATGTCAACAATTTGCATGGGGCAGCTGAATCACTTCCAGTAACTTTCTGATCAGAAGCATTTTCTTTATTTTTGGATCGCAAATGTGATGCTGGAGAGTTTTACTCTATATTGTATGTGAAATCCCCTATTATGCCACTGAAATCATGTAGA
GATGCAAGTTACAACCCAGATGCAACTTGGACTGATAAAAGTGTAGGCAAGGGTATAAATTTCAAACTAAATTCAAAATACCTTTCATGGGAGAAGTTCTACTAAATTTTTTAGCTGAGAGGCACATTCTACAGCCCAGGTAGGGGGAGGGACTAAATATAACTTGCATATAAAGCTTCATATGCGACATCCTTGTCGAT
TCTGCTATATACTTATTAATTCAAGATGGAG
>TRINITY_DN37449_c0_g2_i2 from sample A6 / Example unspliced isoform:GAAGAGTGTTACATTGACAAGgcattgcagctagaccttttatttgaattccattctgcttagacaacctcactatttctttgttggacttgttttcatcactggttgtatctcttttcataacttcaatcgttggtgtttgttgacccagGCTCAAACATCCTGCGATTCCAGTCATCTTCAGTTCCACATCGGCGGGT
TTTAGGCTTATCTAGACGAGTTCGCCCAGCACCTTTGCATCCATATCTATCGAAGACTGATAAATAACAGTTAAGTTATTCATTGCAAGTATCATTCAGGTGATAATCTCCACAATTGTATGAAAGGGTCCTGGATATATTTGTATATGAAATGTGCAGTGCTATTTCAAGGAAGATGTTGAATATACATTGAAATCCTT
ATTGTTTAGAAGAGCATTTGTATAGTGTAGCCTGCATAATAACTCATATAATTATTGTTGGTCAACTACATCCATGTCAACAATTTGCATGGGGCAGCTGAATCACTTCCAGTAACTTTCTGATCAGAAGCATTTTCTTTATTTTTGGATCGCAAATGTGATGCTGGAGAGTTTTACTCTATATTGTATGTGAAATCCCC
TATTATGCCACTGAAATCATGTAGAGATGCAAGTTACAACCCAGATGCAACTTGGACTGATAAAAGTGTAGGCAAGGGTATAAATTTCAAACTAAATTCAAAATACCTTTCATGGGAGAAGTTCTACTAAATTTTTTAGCTGAGAGGCACATTCTACAGCCCAGGTAGGGGGAGGGACTAAATATAACTTGCATATAAAG
CTTCATATGCGACATCCTTGTCGATTCTGCTATATACTTATTAATTCAAGATGGAG