sp|Q9M5L0|RL35_EUPES ----> Large ribosomal subunit protein uL29

Intron 1 GTAAGAAAAT ... ATGGTGGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	32.34	235	2.3	112.3
A2	35.45	224	1	123
A3	27.32	282	3	106
A4	29.97	222	2	95
A5	30.35	140	1	61
A6	29.85	1396	4	594
A7	29.98	1233	3	528
A8	29.98	885	0	379
A9	29.83	1261	2	536
A10	29.6	1075	6	452

>TRINITY_DN118667_c6_g2_i2 from sample A1 / Example spliced isoform

CGCCGGTTAATGACACCTCCTTGTATAAACCTAACCGCTTTTACTAATAAAAAACGGAACTTTGTAATAACTCACGAATTTATTGGGGCAATATGAAACCCTAGGGCATCGTCTAAACCTGACGGCTCAGAACGATAGTTTATTCGCTTCGGTTACTGTTGTTACAACGAGGGCAAGCAAGGCTAAGGATTTTGGGCAAA
CATGGCCAGGATTAAGGTTCACGAGTTACGGATCAAGAGCAAAACAGAGCTCCTGAATCAACTGAAGGAACTAAAGGCGGAGCTTGCTCTGCTCAGGGTTGCCAAGGTCACAGGAGGAGCTGCTAACAAGCTTTCTAAAATCAAGGTGGTGAGATTATCAATTGCACAGGTGTTGACAGTAATATCTCAAAATCAGAAAA
CGGCTTTGAGGGAAGCCTACAAGAAGAAGAAGTATTTGCCTCTTGACTTGCGACCTAAGAAGACCCGCGCCATCAGACGACGCCTCACCAAGCACCAGGCTTCATTGAAGACTGAGAGACAGAAAAAGAAGGAGATGTACTTCCCAATGAGAAAGTATGCAGTCAAGGTCTAAAGGCAACAGCTTTCTTGCTAGCATTAT
TTGTTTTGCTTGTTGGATACAGGAGCCGAGTGTTCAGGCTCAGTGAGTCATCTATATTAGATTTGTTTGGAAAGCTTAGATTGGATTCCAGTTCTATTGATTGTGTATGGAATTGAAATCAGATTTCCATCCTCACGTTTCATTTTGGTATTCAAATTAAAAAGCTCCAAAGTGTGTTGGACCGATAACCTATTAGGATT
GATTATCCTGTATGGTTTTTTGGAGTAGTCCTTAGCTATGTAGAGATGCTATTAGTCTGTCCTGGTCAAGTTTAGAGGAAAAGACTTTTTCTGCGATCCAATTTGGAATATTTTTTCCAAAGTACACCTAGAAGACTAAGTTGCTTTTTTAAGAATAACAAAAGTTGCAGTGCTTCAGACAAAATCTACTTTTTGAAAAG
AAATATCATGTGGTATATCAGTAACAATATTGATGTGCATCATCCTCTGCAACCTTTGAATTTAAACCTAAAAGGCAGTTTTTCTTTTCAGGCAGCACAACTAGGCTCCTGGTCCAAGTATTTAGTAAAAATGCATATACGAACTTGAAAAAAAA

>TRINITY_DN118667_c6_g2_i1 from sample A1 / Example unspliced isoform:

TTTTGGGCAAACATGGgtaagaaaatgagtgcaattggcatggcatttgaacactaattctgttatctaatggcgtgatatatggtggcagCCAGGATTAAGGTTCACGAGTTACGGATCAAGAGCAAAACAGAGCTCCTGAATCAACTGAAGGAACTAAAGGCGGAGCTTGCTCTGCTCAGGGTTGCCAAGGTCACAGG
AGGAGCTGCTAACAAGCTTTCTAAAATCAAGGTGGTGAGATTATCAATTGCACAGGTGTTGACAGTAATATCTCAAAATCAGAAAACGGCTTTGAGGGAAGCCTACAAGAAGAAGAAGTATTTGCCTCTTGACTTGCGACCTAAGAAGACCCGCGCCATCAGACGACGCCTCACCAAGCACCAGGCTTCATTGAAGACTG
AGAGACAGAAAAAGAAGGAGATGTACTTCCCAATGAGAAAGTATGCAGTCAAGGTCTAAAGGCAACAGCTTTCTTGCTAGCATTATTTGTTTTGCTTGTTGGATACAGGAGCCGAGTGTTCAGGCTCAGTGAGTCATCTATATTAGATTTGTTTGGAAAGCTTAGATTGGATTCCAGTTCTATTGATTGTGTATGGAATT
GAAATCAGATTTCCATCCTCACGTTTCATTTTGGTATTCAAATTAAAAAGCTCCAAAGTGTGTTGGACCGATAACCTATTAGGATTGATTATCCTGTATGGTTTTTTGGAGTAGTCCTTAGCTATGTAGAGATGCTATTAGTCTGTCCTGGTCAAGTTTAGAGGAAAAGACTTTTTCTGCGATCCAATTTGGAATATTTT
TTCCAAAGTACACCTAGAAGACTAAGTTGCTTTTTTAAGAATAACAAAAGTTGCAGTGCTTCAGACAAAATCTACTTTTTGAAAAGAAATATCATGTGGTATATCAGTAACAATATTGATGTGCATCATCCTCTGCAACCTTTGAATTTAAACCTAAAAGGCAGTTTTTCTTTTCAGGCAGCACAACTAGGCTCCTGGTC
CAAGTATTTAGTAAAAATGCATATACGAACTTGAAAAAAAA