sp|Q8LES0|ROCK1_ARATH ----> UDP-N-acetylglucosamine transporter ROCK1

Intron 1 GTAACTTGAG ... TCTCTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	36.84	12	5.2	7
A2	33.33	12	9.7	6
A3	35.55	16	7.7	8.8
A4	38.1	13	3.3	8
A5	33.33	4	1.7	2
A6	33.33	36	9.2	18
A7	24.32	28	14.3	9
A8	34.78	15	5.8	8
A9	25	18	5.8	6
A10	21.43	22	13	6

>TRINITY_DN134569_c4_g5_i6 from sample A1 / Example spliced isoform

GCATGACAGTTTTGCCTTGCACGTCAAATATACTTTCCTGACGATTAAAGCTTAAAGCGCTGACGCAGATTCTCTTCGACTCTGGTTATCTGTTTCCGCGAGCTTAGAAGGTCCATCAATGGCGGTCAAATCCAGGGCACGCGGAAAACAGAACAACGAAGATCATAGAAAACACAAGAGCAGAATGTGGTTGTATCTCA
CACTGCTTACTCTGCAATATGGTGCACAGCCTTTGCTCTCTAAACGTTTTACCGGGAAAGAAGTAACAGTGACTTCTTCTGTACTGGTTTGTGAGTGTGCAAAGGTTCTATGTGCTTTGGTACTTATGGTAAAAGAAGGCAGCTTGGGCAGACTTAGCAACGAGTGGACCTTTATAGGTTCATTGACAGCTTCAGGCCTC
CCAGCAGCTATTTATGCACTGCAGAATAGCTTGTTGCAGCTTTCTTATCGAAATCTGGATTCGCTCACGTTTACAATGCTTAATCAGACAAAGCTATTTTTCACTGCACTTTTCATGTACTTGATTTTGGGGCAGAAGCAGTCACTTCAACAAGTTGGAGCCCTAGTTTTATTGATCTTTGCTGCCTTTCTCCTCAGCAT
TGGTGAAGGCTCTGGTCGTGGTTCCAAAGGAGTTGATTCTGAGCAAGCATTTCTTCTTGGCATTATACCTGTAATAGCTGCATCTGTGCTATCGGGTTTAGCATCCTCACTCTGTCAATGGGCATCGCAGGTGAAGAAAAGGAGTTCATATTTAATGACAATAGAAATGTCAGTCATTGGAAGTCTATGTATGTTGGCAA
GCACTCTCAAATCACCTGATGGAAAAGCTATTAGACAGCAGGGTTTCTTCTCTGGGTGGACGATATTAACTTTGATCCCAGTTTTAACTAATGCAGTTGGTGGAATCTTAGTTGGACTCGTAACTACACAAGCTGGTGGTGTCCGAAAGGGTTTTGTTATTGTATCTGCTTTGATAGTGACCGCCTTGTTGCAATATGTA
TTTGATGGTATACCACCATCTTTATATGTTCTGTTATCTCTACCTCTGGTGGTCACCAGCATAATTATTTATCAGAGATATCCTTATCAGGCAAAAGAAAAGAAACTGTAAGGCATCATCCTTGGAAGGGTTAGATACATTTGGAGCATAAATGTGGTGGTCATATAGCAGGCCCTGAAATCCTGCATAGCTACCATGTA
GAACTTATAAATGTGGTGGTCATATAGCAGGCCCTGAAATCCTGCATAGCTACCATGTAGAACTTATAAATGTGGTGGTCATATAGCA

>TRINITY_DN134569_c4_g5_i1 from sample A1 / Example unspliced isoform:

TTTTATTTTTATTGATTCATGATCTCTACTATATCTGTTTTGTTACATTTGTAAACTAATTATGTAAGCTCTGTCCATGTTTATTTGTGTCTTCTGGCAATGTGTAGGTTCTATGTGCTTTGGTACTTATGGTAAAAGAAGGCAGCTTGGGCAGACTTAGCAACGAGTGGACCTTTATAGGTTCATTGACAGCTTCAGGC
CTCCCAGCAGCTATTTATGCACTGCAGAATAGCTTGTTGCAGCTTTCTTATCGAAATCTGGATTCGCTCACGTTTACAATGCTTAATCAGACAAAGCTATTTTTCACTGCACTTTTCATGTACTTGATTTTGGGgtaacttgagagagattgactgaagtagctgtgataatcatttgtacgtatttagctgagcacaat
ctcttgcagGCAGAAGCAGTCACTTCAACAAGTTGGAGCCCTAGTTTTATTGATCTTTGCTGCCTTTCTCCTCAGCATTGGTGAAGGCTCTGGTCGTGGTTCCAAAGGAGTTGATTCTGAGCAAGCATTTCTTCTTGGCATTATACCTGTAATAGCTGCATCTGTGCTATCGGGTTTAGCATCCTCACTCTGTCAATGGG
CATCGCAGGTGAAGA

Intron 2 GTGAAGATCA ... GTGATTGAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	44.44	10	4	12
A2	21.95	16	5	4
A3	29.03	11	6	3
A4	14.29	9	3	0
A5	18.75	13	4	2
A6	21.26	50	13	14
A7	15.46	41	8	7
A8	26.76	26	12	7
A9	23.2	48	18	11
A10	22.39	26	9	6

>TRINITY_DN134569_c4_g5_i5 from sample A1 / Example spliced isoform

CCTGGTTCCCTCTGCCTATCATAGTCTGATCCAAAATTTACTTTAAATTGGTTTTTATATTTGCAGGTAACTTGAGAGAGATTGACTGAAGTAGCTGTGATAATCATTTGTACGTATTTAGCTGAGCACAATCTCTTGCAGGCAGAAGCAGTCACTTCAACAAGTTGGAGCCCTAGTTTTATTGATCTTTGCTGCCTTTC
TCCTCAGCATTGGTGAAGGCTCTGGTCGTGGTTCCAAAGGAGTTGATTCTGAGCAAGCATTTCTTCTTGGCATTATACCTGTAATAGCTGCATCTGTGCTATCGGGTTTAGCATCCTCACTCTGTCAATGGGCATCGCAGGTGAAGAAAAGGAGTTCATATTTAATGACAATAGAAATGTCAGTCATTGGAAGTCTATGT
ATGTTGGCAAGCACTCTCAAATCACCTGATGGAAAAGCTATTAGACAGCAGGGTTTCTTCTCTGGGTGGACGATATTAACTTTGATCCCAGTTTTAACTAATGCAGTTGGTGGAATCTTAGTTGGACTCGTAACTACACAAGCTGGTGGTGTCCGAAAGGGTTTTGTTATTGTATCTGCTTTGATAGTGACCGCCTTGTT
GCAATATGTATTTGATGGTATACCACCATCTTTATATGTTCTGTTATCTCTACCTCTGGTGGTCACCAGCATAATTATTTATCAGAGATATCCTTATCAGGCAAAAGAAAAGAAACTGTAAGGCATCATCCTTGGAAGGGTTAGATACATTTGGAGCATAAATGTGGTGGTCATATAGCAGGCCCTGAAATCCTGCATAG
CTACCATGTAGAACTTATAAATGTGGTGGTCATATAGCAGGCCCTGAAATCCTGCATAGCTACCATGTAGAACTTATAAATGTGGTGGTCATATAGCA

>TRINITY_DN134569_c4_g5_i7 from sample A1 / Example unspliced isoform:

GGTAACTTGAGAGAGATTGACTGAAGTAGCTGTGATAATCATTTGTACGTATTTAGCTGAGCACAATCTCTTGCAGGCAGAAGCAGTCACTTCAACAAGTTGGAGCCCTAGTTTTATTGATCTTTGCTGCCTTTCTCCTCAGCATTGGTGAAGGCTCTGGTCGTGGTTCCAAAGGAGTTGATTCTGAGCAAGCATTTCTT
CTTGGCATTATACCTGTAATAGCTGCATCTGTGCTATCGGGTTTAGCATCCTCACTCTGTCAATGGGCATCGCAGgtgaagatcatgaagtctacaatcactttggtattttgagagcctgttttgaaaagcattttcctttcagtttcagccattttaatttaactttcctttgtgattgaagGTGAAGAAAAGGAGTT
CATATTTAATGACAATAGAAATGTCAGTCATTGGAAGTCTATGTATGTTGGCAAGCACTCTCAAATCACCTGATGGAAAAGCTATTAGACAGCAGGGTTTCTTCTCTGGGTGGACGATATTAACTTTGGTATGGCTAATCTGACTGAACTTTCCATATGCTTTTAACTAGTAATTGTATGGAAGCTATACATGTGACATG
CAAAACTTGTAGTTATCATAGAAAAATCCATGGAAGCTTAAAAAATTAAGAATTTATTCCGT