sp|Q9SMR2|TBCC_ARATH ----> Tubulin-folding cofactor C
Intron 1 GTCTTGAACT ... TGTTGGGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 68.29 | 26 | 55 | 57 |
| A2 | 59.12 | 28 | 53 | 28 |
| A3 | 53.1 | 34 | 37 | 40 |
| A4 | 61.54 | 20 | 40 | 24 |
| A5 | 60.53 | 15 | 23 | 23 |
| A6 | 73.68 | 25 | 90 | 50 |
| A7 | 61.57 | 44 | 82 | 59 |
| A8 | 63.38 | 26 | 60 | 30 |
| A9 | 53.85 | 36 | 54 | 30 |
| A10 | 70.7 | 23 | 70 | 41 |
>TRINITY_DN105669_c0_g1_i7 from sample A5 / Example spliced isoformGTAATAATTGTTTTTAAAAAAACCTGAGCCCAAAAGGGGTCGGAAGAAACCATTTTGGGCCTCTTTTCATTCATCTCTCATATTTGGGTGGTGTGTCTGTGCGCATGTCGCATTTTGTTCGATATTGAACTCCTCTCTCCCTTCCTACTCGCTGTCGAAAGATTACAAAGTTGTCCGACTTGCAATCTCATTCATTTTCA
CTCAAATTCAAAGCCCGGATGCTCGTAGATCCAAGGACAAGGCGGGCACAAGTTCAGCACGCACAGGAAGTAAGGTCAGATTTACGGTATTTTTTGTCTTAGGGTTTAAATTTTTTGGATATCAGATCAGATGCATGGATCCGTTTGCAGAAGCCGAGGTTATGGATATTCTTATACATACTGCTATTGGCCACTTTATT
TAAACTAAATCTCAATCATCGCTTAAATACGGGAGGGGAAAAGCTTGAAAATCCGAAAGGACTGGATAAGAAAAATAAAAGAAGGGGAAAAATAATTTGTGGGGGTTGAATGAAAAGAATTCATCCTTGAAAAGATGACAGAGAATGAGGTGCCATTATTTCTTCATCTGCGCAGAGAGCCATTCGAGTATGGACTCTTA
CCCCTGCCTCACCTCATGTTCACAGATGGGACCGCCAAATTGAAAACCCTCAGGGAAAAACTCGTCCAGAATTCTTTTACTTACACTGTAAATAATAATAATCACAATAGTAACAATGATGATAGTCACAATGATAATAATGGGGAGGTGTCCAGATCGTTTAGCAGGCGCGTGAATGCCACTGGCATCGCAGAGAGCTT
ACAGCTTTCCGAAGACCATGCTCGTGTTGTTATAGATACCTTGGCTTCTGTGCTGCCCGAGTATGGACGAGGAGGAGGAGCAGCAGATCCCCTCGTTCATGCTGCGTGCATGGATGTGGACTTAATCGGCGCCGATGTATATGATTTGATACTGTTCTTGGTCATTCAAACTTATAAGAAGCTCGTGCCCAGGACTCACA
AGGATGCGGCGTCGGTTGCGGATGTTTGGCCCTCAACTTCTGCCTTCGATGGAATTTTCGCTACTCTTTCACCACTCCAACTAATCAGATCTGGTCGTCGCTTTATGCCATCTCAAGCAGATGAGGAAGCTCACCAGCTATCATATATGCAAAAACTTTTGCCAAATATATTGGATTTGTTGGCAGAGCCATCAGACAAT
GAAAGCGCGGAAATGCAGGTTTTGAGCTCAGAAAGTTTTGAGCATCTGGGGTTACTCCTTCATGTTAGGGAAAGAGGCACGGAACGTAGGTCTCTTAGCCAAGTAGCTCCGTTTTTTGCAAACTCAGATCCTGATATGCCTGCTGTTCCGGTACCTGTTCCACAGGTGCTTGATTGGATACTTGAGCATATTTGTTCTGC
ATCAGATCATCCTCTAGAAAGGGTGCTTGGTGGAGAAAATGGGTCCTTCACTGTTGGTGATTTGGATATTACAAAGAATGATTCACATACTAGCAGTTCTGGGAGTCAATCTGGTGCATTCCCTAATGGTTTCAATCAGCAGCAGAAAGATGCTTATTTAAAACTGACTTTTGTTGAGGGAGTTAATAAAGCATCAGTAG
TGAAGCAACCTAGTGATATTGAAGGATCTTCAGTCAAGGCTGTAAGAGTGGAGCATTGTGAACGTGTAAATGTGATAGTTGCAACAATGCATATTTGCATAGCAAATTGCCGTGAATGCATTTTCTACTTGGGTGTGAATAAGCGGCCAATAATATCTGGCAATAATCACAATATACAGGTGGCGCCATATAATACATTT
TATCCGGATCTAGATATGCATTTGGCACAAGTTGGGGTAGATCCAACAGTTAATATGTGGGACAAGCCTTCGGCACTAGGAATGGTGGACCCACATGATTCTCTATCACATCCAGCGGGTGTTTCTGATGTACAAGCTGAGTCGGCCACTGTTCTTCATCTGGACCAGTTCTTGAACTTTGTGATTCCAAAATGGTTTGA
AGTGGAATCCAAATATCAACAAACAAAAGACAATCCTTTTATTTTACCAAATCCCTACATGGCAGCACAACAGCAAAAGTATAACTCGCTAGAGAATATGAGAGAATCGCTAAGAAGCACTCAACTGGATGATAGTAAAAAGCGCGAACTAGCAAGTGCAATTCATGGTCATTTCAAGGACTGGCTATATGCATCTGGTC
ATATTCGTCAGCTTTATTGTCTACAAAGTAGTGAACTGGATTCAAGGGAGATTGACTGATTGGGGATTTCTGCCCATTGCAAGTGGCAATGGACCGACCCTATATGTGTCATAGGGATATAGAGGATGCTTTTGTAGAGCTTCTTGTAGATGGACTTCATTTTACATTCAGATTATTTCATCATGCCAGCCTGGATTTAC
AGATTTACTTCGATTTGGAGGTTCTCATTTGGCTTATGGCAGGCTGTCCAAAAGGGTGCCTTTTTTGAACCAGATTGCAGGAATACAACATCAAAGATTTGATTTTCTTCATGGGATCCTGATAGAATCTTGTATAAGTCATCCTGTAGTTGCATCATATGTTTTTCACTAGACATTAATTCAAAGTGTATCATTGAATG
AGCTCTTTTGTCATGTATACTCTAGGAAAATGGTTGTATTTTAGATACATGAACATGTATTTTAAGGGTAAGCACCACCCTCATTTATTAAGACCTGAGGAAGACATTTGCGGATTTCACTCTTATTTTGATTGCATGTGCCCCTATT
>TRINITY_DN105669_c0_g1_i1 from sample A5 / Example unspliced isoform:GTAATAATTGTTTTTAAAAAAACCTGAGCCCAAAAGGGGTCGGAAGAAACCATTTTGGGCCTCTTTTCATTCATCTCTCATATTTGGGTGGTGTGTCTGTGCGCATGTCGCATTTTGTTCGATATTGAACTCCTCTCTCCCTTCCTACTCGCTGTCGAAAGATTACAAAGTTGTCCGACTTGCAATCTCATTCATTTTCA
CTCAAATTCAAAGCCCGGATGCTCGTAGATCCAAGGACAAGGCGGGCACAAGTTCAGCACGCACAGGAAGTAAGGTCAGATTTACGGTATTTTTTGTCTTAGGGTTTAAATTTTTTGGATATCAGATCAGATGCATGGATCCGTTTGCAGAAGCCGAGGTTATGGATATTCTTATACATACTGCTATTGGCCACTTTATT
TAAACTAAATCTCAATCATCGCTTAAATACGGGAGGGGAAAAGCTTGAAAATCCGAAAGGACTGGATAAGAAAAATAAAAGAAGGGGAAAAATAATTTGTGGGGGTTGAATGAAAAGAATTCATCCTTGAAAAGATGACAGAGAATGAGGTGCCATTATTTCTTCATCTGCGCAGAGAGCCATTCGAGTATGGACTCTTA
CCCCTGCCTCACCTCATGTTCACAGATGGGACCGCCAAATTGAAAACCCTCAGGGAAAAACTCGTCCAGAATTCTTTTACTTACACTGTAAATAATAATAATCACAATAGTAACAATGATGATAGTCACAATGATAATAATGGGGAGGTGTCCAGATCGTTTAGCAGGCGCGTGAATGCCACTGGCATCGCAGAGAGCTT
ACAGCTTTCCGAAGACCATGCTCGTGTTGTTATAGATACCTTGGCTTCTGTGCTGCCCGAGTATGGACGAGGAGGAGGAGCAGCAGATCCCCTCGTTCATGCTGCGTGCATGGATGTGGACTTAATCGGCGCCGATGTATATGATTTGATACTGTTCTTGGTCATTCAAACTTATAAGAAGCTCGTGCCCAGGACTCACA
AGGATGCGGCGTCGGTTGCGGATGTTTGGCCCTCAACTTCTGCCTTCGATGGAATTTTCGCTACTCTTTCACCACTCCAACTAATCAGATCTGGTCGTCGCTTTATGCCATCTCAAGCAGATGAGGAAGCTCACCAGCTATCATATATGCAAAAACTTTTGCCAAATATATTGGATTTGTTGGCAGAGCCATCAGACAAT
GAAAGCGCGGAAATGCAGGTTTTGAGCTCAGAAAGTTTTGAGCATCTGGGGTTACTCCTTCATGTTAGGGAAAGAGGCACGGAACGTAGGTCTCTTAGCCAAGTAGCTCCGTTTTTTGCAAACTCAGATCCTGATATGCCTGCTGTTCCGGTACCTGTTCCACAGGTGCTTGATTGGATACTTGAGCATATTTGTTCTGC
ATCAGATCATCCTCTAGAAAGGGTGCTTGGTGGAGAAAATGGGTCCTTCACTGTTGGTGATTTGGATATTACAAAGAATGATTCACATACTAGCAGTTCTGGGAGTCAATCTGGTGCATTCCCTAATGGTTTCAATCAGCAGCAGAAAGATGCTTATTTAAAACTGACTTTTGTTGAGGGAGTTAATAAAGCATCAGTAG
TGAAGCAACCTAGTGATATTGAAGGATCTTCAGTCAAGgtcttgaactgccatgattcagtgatatacatattagcacccttgaattatgcaactattaatgggtgttcagatgctactatccttcttggagctgttgggaagGCTGTAAGAGTGGAGCATTGTGAACGTGTAAATGTGATAGTTGCAACAATGCATATT
TGCATAGCAAATTGCCGTGAATGCATTTTCTACTTGGGTGTGAATAAGCGGCCAATAATATCTGGCAATAATCACAATATACAGGTGACATAAACAACTCTTTTTCATTAAAAAGCTGTGTGTACATGCAAATAATTTCTTTGGAAATGGGG
Intron 2 GTAAGCAACT ... TCATCTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.06 | 22.5 | 7 | 5 |
| A2 | 27.91 | 31 | 16 | 8 |
| A3 | 23.92 | 35 | 7 | 15 |
| A4 | 22.23 | 24.5 | 5 | 9 |
| A5 | 17.65 | 28 | 5 | 7 |
| A6 | 16.27 | 121 | 36 | 11 |
| A7 | 15.92 | 84.5 | 21 | 11 |
| A8 | 14.64 | 137 | 27 | 20 |
| A9 | 12.3 | 85.5 | 10 | 14 |
| A10 | 15.94 | 58 | 16 | 6 |
>TRINITY_DN113341_c0_g1_i4 from sample A2 / Example spliced isoformATAATTGTTTTAAAAAAAACCTGAGCCCAAAAGGGGTCGGAAGAAACCATTTTGGGCCTCTTTTCATTCATCTCTCATATTTGGGTGGTGTGTCTGTGCGCATGTCGCATTTTGTTCGATATTGAACTCCTCTCTCCCTTCCTACTCGCTGTCGAAAGATTACAAAGTTGTCCGACTTGCAATCTCATTCATTTTCACTC
AAATTCAAAGCCCGGATGCTCGTAGATCCAAGGACAAGGCGGGCACAAGTTCAGCACGCACAGGAAGTAAGGTCAGATTTACGGTATTTTTTGCCTTAGGGTTTAAATTTTTTGGATATCAGATCAGATGCATGGATCCGTTTGCAGAAGCCGAGGTTATGGATATTCTTATACATACTGCTATTGGCCACTTTATTTAA
ACTAAATCTCAATCATCGCTTAAATACGGGAGGGGAAAAGCTTGAAAATCCGAAAGGACTGGATAAGAAAAATAAAAGAAGGGGAAAAATAATTTGTGGGGGTTGAATGAAAAGAATTCATCCTTGAAAAGATGACAGAGAATGAGGTGCCATTGTTTCTTCATCTGCGCAGAGAGCCATTCGAGTATGGACTCTTACCC
CTGCCTCACCTCATGTTCACAGATGGGACCGCCAAATTGAAAACCCTCAGGGAAAAACTCGTCCAGAATTCTTTTACTTACACTGTAAATAATAATAATCACAATAGTAACAATGATGACAGTCACAATGATAATAATGGGGAGGTGTCCAGATCGTTTAGCAGGCGCGTGAATGCCACTGGCATCGCAGAGAGCTTACA
GCTTTCCGAAGACCATGCTCGTGTTGTTATAGATACCCTGGCTTCTGTGCTGCCCGAGTATGGACGAGGAGGAGGAGCAGCAGATCCCCTCGTTCATGCTGCGTGCATGGATGTGGACTTAATCGGCGCCGATGTATATGATTTGATACTGTTCTTGGTCATTCAAACTTATAAGAAGCTCGTGCCCAGGACTCACAAGG
ATGCGGCGTCGGTTGCGGATGTTTGGCCCTCAACTTCTGCCTTCGATGGAATTTTCGCTACTCTTTCACCACTCCAACTAATCAGATCTGGTCGTCGCTTTATGCCATCTCAAGCAGATGAGGAAGCTCACCAGCTATCATATATGCAAAAACTTTTGCCAAATATATTGGATTTGTTGGCAGAGCCATCAGACAATGAA
AGCGCGGAAATGCAGGTTTTGAGCTCAGAAAGTTTTGAGCATCTGGGGTTACTCCTTCATGTTAGGGAAAGAGGCACGGAACGTAGGTCTCTTAGCCAAGTAGCTCCGTTTTTTGCAAACTCAGATCCTGATATGCCTGCTGTTCCGGTACCTGTTCCACAGGTGCTTGATTGGATACTTGAGCATATTTGTTCTGCATC
AGATCATCCTCTAGAAAGGGTGCTTGGTGGAGAAAATGGGTCCTTCACTGTTGGTGATTTGGATATTACAAAGAATGATTCACATACTAGCAGTTCTGGGAGTCAATCTGGTGCATTCCCTAATGGTTTCAATCAGCAGCAGAAAGATGCTTATTTAAAACTGACTTTTGTTGAGGGAGTTAATAAAGCATCAGTAGTGA
AGCAACCTAGTGATATTGAAGGATCTTCAGTCAAGGTCTTGAACTGCCATGATTCAGTGATATACATATTAGCACCCTTGAATTATGCAACTATTAATGGGTGTTCAGATGCTACTATCCTTCTTGGAGCTGTTGGGAAGGCTGTAAGAGTGGAGCATTGTGAACGTGTAAATGTGATAGTTGCAACAATGCATATTTGC
ATAGCAAATTGCCGTGAATGCATTTTCTACTTGGGTGTGAATAAGCGGCCAATAATATCTGGCAATAATCACAATATACAGGTGGCGCCATATAATACATTTTATCCGGATCTAGATATGCATTTGGCACAAGTTGGGGTAGATCCAACAGTTAATATGTGGGACAAGCCTTCGGCACTAGGAATGGTGGACCCACATGA
TTCTCTATCACATCCAGCGGGTGTTTCTGATGTACAAGCTGAGTCGGCCACTGTTCTTCATCTGGACCAGTTCTTGAACTTTGTGATTCCAAAATGGTTTGAAGTGGAATCCAAATATCAACAAACAAAAGACAATCCTTTTATTTTACCAAATCCCTACATGGCAGCACAACAGCAAAAGTATAACTCGCTAGAGAATA
TGAGAGAATCGCTAAGAAGCACTCAACTGGATGATAGTAAAAAGCGCGAACTAGCAAGTGCAATTCATGGTCATTTCAAGGACTGGCTATATGCATCTGGTCATATTCGTCAGCTTTATTGTCTACAAAGTAGTGAACTGGATTCAAGGGAGATTGACTGATTGGGGATTTCTGCCCATTGCAAATGGCAATGGACCGAC
CCTATATGTGTCATAGGGATATAGAGGATGCTTTTGTAGAGCTTCTTGTAGATGGACTTCATTTTACATTCAGATTATTTCATCATGCCAGCCTGGATTTACAGATTTACTTCGATTTGGAGGTTCTCATTTGGCTTATGGCAGGCTGTCCAAAAGGGTGCCTTTTTTGAACCAGATTGCAGGAATACAACATCAAAGAT
TTGATTTTCTTCATGGGATCCTGATAGAATCTTGTATAAGTCATCCTGTAGTTGCATCATATGTTTTTCACTAGACATTAATTCAAAGTGTATCATTGAATGAGCTCTTTTGTCATGTATACTCTAGGAAAATGGTTGTATTTTAGATACATGAACATGTATTTTAAGGGTAAGCACCACCCTCATTTATTAAGACCTGA
GGAAGACATTTGCGGATTTCACTCTTATTTTGATTGCATGTGCCCCTATTAATTATCATGAAACATCTTGTATGACTTTCAGCAAGTCGTACTGTTGAATAAACAAATTTACTGGTTACTTGACTTGTAAGTTAAGTCTCGAGTGTCAAT
>TRINITY_DN113341_c0_g1_i1 from sample A2 / Example unspliced isoform:ATAATTGTTTTAAAAAAAACCTGAGCCCAAAAGGGGTCGGAAGAAACCATTTTGGGCCTCTTTTCATTCATCTCTCATATTTGGGTGGTGTGTCTGTGCGCATGTCGCATTTTGTTCGATATTGAACTCCTCTCTCCCTTCCTACTCGCTGTCGAAAGATTACAAAGTTGTCCGACTTGCAATCTCATTCATTTTCACTC
AAATTCAAAGCCCGGATGCTCGTAGATCCAAGGACAAGGCGGGCACAAGTTCAGCACGCACAGGAAGTAAGGTCAGATTTACGGTATTTTTTGCCTTAGGGTTTAAATTTTTTGGATATCAGATCAGATGCATGGATCCGTTTGCAGAAGCCGAGGTTATGGATATTCTTATACATACTGCTATTGGCCACTTTATTTAA
ACTAAATCTCAATCATCGCTTAAATACGGGAGGGGAAAAGCTTGAAAATCCGAAAGGACTGGATAAGAAAAATAAAAGAAGGGGAAAAATAATTTGTGGGGGTTGAATGAAAAGAATTCATCCTTGAAAAGATGACAGAGAATGAGGTGCCATTGTTTCTTCATCTGCGCAGAGAGCCATTCGAGTATGGACTCTTACCC
CTGCCTCACCTCATGTTCACAGATGGGACCGCCAAATTGAAAACCCTCAGGGAAAAACTCGTCCAGAATTCTTTTACTTACACTGTAAATAATAATAATCACAATAGTAACAATGATGACAGTCACAATGATAATAATGGGGAGGTGTCCAGATCGTTTAGCAGGCGCGTGAATGCCACTGGCATCGCAGAGAGCTTACA
GCTTTCCGAAGACCATGCTCGTGTTGTTATAGATACCCTGGCTTCTGTGCTGCCCGAGTATGGACGAGGAGGAGGAGCAGCAGATCCCCTCGTTCATGCTGCGTGCATGGATGTGGACTTAATCGGCGCCGATGTATATGATTTGATACTGTTCTTGGTCATTCAAACTTATAAGAAGCTCGTGCCCAGGACTCACAAGG
ATGCGGCGTCGGTTGCGGATGTTTGGCCCTCAACTTCTGCCTTCGATGGAATTTTCGCTACTCTTTCACCACTCCAACTAATCAGATCTGGTCGTCGCTTTATGCCATCTCAAGCAGATGAGGAAGCTCACCAGCTATCATATATGCAAAAACTTTTGCCAAATATATTGGATTTGTTGGCAGAGCCATCAGACAATGAA
AGCGCGGAAATGCAGGTTTTGAGCTCAGAAAGTTTTGAGCATCTGGGGTTACTCCTTCATGTTAGGGAAAGAGGCACGGAACGTAGGTCTCTTAGCCAAGTAGCTCCGTTTTTTGCAAACTCAGATCCTGATATGCCTGCTGTTCCGGTACCTGTTCCACAGGTGCTTGATTGGATACTTGAGCATATTTGTTCTGCATC
AGATCATCCTCTAGAAAGGGTGCTTGGTGGAGAAAATGGGTCCTTCACTGTTGGTGATTTGGATATTACAAAGAATGATTCACATACTAGCAGTTCTGGGAGTCAATCTGGTGCATTCCCTAATGGTTTCAATCAGCAGCAGAAAGATGCTTATTTAAAACTGACTTTTGTTGAGGGAGTTAATAAAGCATCAGTAGTGA
AGCAACCTAGTGATATTGAAGGATCTTCAGTCAAGGTCTTGAACTGCCATGATTCAGTGATATACATATTAGCACCCTTGAATTATGCAACTATTAATGGGTGTTCAGATGCTACTATCCTTCTTGGAGCTGTTGGGAAGGCTGTAAGAGTGGAGCATTGTGAACGTGTAAATGTGATAGTTGCAACAATGCATATTTGC
ATAGCAAATTGCCGTGAATGCATTTTCTACTTGGGTGTGAATAAGCGGCCAATAATATCTGGCAATAATCACAATATACAGGTGGCGCCATATAATACATTTTATCCGGATCTAGATATGCATTTGGCACAAGTTGGGGTAGATCCAACAGTTAATATGTGGGACAAGCCTTCGGCACTAGGAATGGTGGACCCACATGA
TTCTCTATCACATCCAGCGGGTGTTTCTGATGTACAAGCTGAGTCGGCCACTGTTCTTCATCTGGACCAGTTCTTGAACTTTGTGATTCCAAAATGGTTTGAAGTGGAATCCAAATATCAACAAACAAAAGACAATCCTTTTATTTTACCAAATCCCTACATGGCAGCACAACAGCAAAAGgtaagcaactgtttctcct
gtttcagattctgctcatatttagtgtcttctcttagaaataaatgtaaatatactgctgtctctccatattggtagtttgtaagaattataaaatatttaaactccaaatatacttaaggatttgtgaccaaggttttcagatcataaccaggtatctgtgcataaataatttgtagtatagaggttttaattatttgg
gggttgatatgaatcttaagtaaagcattttgaactttgtatctcctttactttcatctgcagTATAACTCGCTAGAGAATATGAGAGAATCGCTAAGAAGCACTCAACTGGATGATAGTAAAAAGCGCGAACTAGCAAGTGCAATTCATGGTCATTTCAAGGACTGGCTATATGCATCTGGTCATATTCGTCAGCTTTA
TTGTCTACAAAGTAGTGAACTGGATTCAAGGGAGATTGACTGATTGGGGATTTCTGCCCATTGCAAATGGCAATGGACCGACCCTATATGTGTCATAGGGATATAGAGGATGCTTTTGTAGAGCTTCTTGTAGATGGACTTCATTTTACATTCAGATTATTTCATCATGCCAGCCTGGATTTACAGATTTACTTCGATTT
GGAGGTTCTCATTTGGCTTATGGCAGGCTGTCCAAAAGGGTGCCTTTTTTGAACCAGATTGCAGGAATACAACATCAAAGATTTGATTTTCTTCATGGGATCCTGATAGAATCTTGTATAAGTCATCCTGTAGTTGCATCATATGTTTTTCACTAGACATTAATTCAAAGTGTATCATTGAATGAGCTCTTTTGTCATGT
ATACTCTAGGAAAATGGTTGTATTTTAGATACATGAACATGTATTTTAAGGGTAAGCACCACCCTCATTTATTAAGACCTGAGGAAGACATTTGCGGATTTCACTCTTATTTTGATTGCATGTGCCCCTATTAATTATCATGAAACATCTTGTATGACTTTCAGCAAGTCGTACTGTTGAATAAACAAATTTACTGGTTA
CTTGACTTGTAAGTTAAGTCTCGAGTGTCAAT