NA ----> NA
Intron 1 GTAAGAATTT ... TTGGCTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 30.86 | 28 | 16 | 9 |
| A2 | 35.29 | 22 | 13 | 11 |
| A3 | 32.63 | 32 | 21 | 10 |
| A4 | 58.33 | 10 | 12 | 16 |
| A5 | 33.33 | 11 | 9 | 2 |
| A6 | 39.68 | 19 | 9 | 16 |
| A7 | 26.86 | 64 | 14 | 33 |
| A8 | 23.6 | 34 | 6 | 15 |
| A9 | 31.2 | 43 | 18 | 21 |
| A10 | 28 | 27 | 10 | 11 |
>TRINITY_DN105696_c0_g1_i1 from sample A2 / Example spliced isoformGACAAAATGGAATTATGACAGCCAGCGCATTCTCGCTTTAAACACAGGGTTCTACGGCGTCTCTGTTCCCTCCTATTCATTTGTTTAAACGCTTTACCGAAATAGTCCATGATCAAAGGCCGTTCAAATCAAACCAATTGAGCTGCTTGTACGCAACTCGGGAAAACAACGATGCCAGGATCTCAGCGAGGATTCAAAAA
TTGAAGACCAGTTCTCGGAAAACCTAGGGCTTTGCATACTCGGGGGGACCAGAATTTGAGCAGAATTTGAGAAAAATAAAAGTGTTATTTTTTCTCAATGTCCGAAGAGATTCAAGCACCAGAATCAATGGACCTTACGTGGCCGAAAATTCTGGCAGTCGTTGCGGGATGTCTTGGAGTAGGTTACATTCTGGGCAGAC
GTTTCAGACTTCGATTTCTTTCCAAGGCCGATATTAATGCCTTACCTCCGTATGATGGAAAAAGCGACATTCACGAAATCGAGAAGATTGCAGAAGTTATGGAAGACTTTAAAATGGTATTGGTTGTTAGAAATGACTTAAAAATGGGCAAGGGCAAGATTGCTGCACAATGCAGTCATGCTACACTTGGTTTATATAAG
AAGCTCTTTTACAGGGCTCCAAAGGCTTTACAAAGGTGGGAGATGTGTGGTCAAGTGAAAGTTGTGACAAGAGTTGAAAGTGAGGAGGAATTGCTACTTTTGCAGGTAATATGGTGCAGCAACTGATTGGCATGTGTGAAATTGTCAATTTATGCTTTCATTCTTCTTGGAAGTTGTTCTTTGTTCATAACTTATTGCTG
CTTGTGTTCCTACTGGCTTTATGCTGATCTTTTTCTCTTTGTTTGGTGTAAGAGAAAAC
>TRINITY_DN105696_c0_g1_i3 from sample A2 / Example unspliced isoform:GACAAAATGGAATTATGACAGCCAGCGCATTCTCGCTTTAAACACAGGGTTCTACGGCGTCTCTGTTCCCTCCTATTCATTTGTTTAAACGCTTTACCGAAATAGTCCATGATCAAAGGCCGTTCAAATCAAACCAATTGAGCTGCTTGTACGCAACTCGGGAAAACAACGATGCCAGGATCTCAGCGAGGATTCAAAAA
TTGAAGACCAGTTCTCGGAAAACCTAGGGCTTTGCATACTCGGGGgtaagaatttgcacgcatcggtattacaggatttgctgagcacttggccccaaagactaattgttcagcatttggcttcagGGACCAGAATTTGAGCAGAATTTGAGAAAAATAAAAGTGTTATTTTTTCTCAATGTCCGAAGAGATTCAAGCAC
CAGAATCAATGGACCTTACGTGGCCGAAAATTCTGGCAGTCGTTGCGGGATGTCTTGGAGTAGGTTACATTCTGGGCAGACGTTTCAGACTTCGATTTCTTTCCAAGGCCGATATTAATGCCTTACCTCCGTATGATGGAAAAAGCGACATTCACGAAATCGAGAAGATTGCAGAAGTTATGGAAGACTTTAAAATGGTA
TTGGTTGTTAGAAATGACTTAAAAATGGGCAAGGGCAAGATTGCTGCACAATGCAGTCATGCTACACTTGGTTTATATAAGAAGCTCTTTTACAGGGCTCCAAAGGCTTTACAAAGGTGGGAGATGTGTGGTCAAGTGAAAGTTGTGACAAGAGTTGAAAGTGAGGAGGAATTGCTACTTTTGCAGAATCGGGCAAAGAC
TTTGAAGTTACCAATGCATATAACTATTGATGCTGGCAAAACACAAATTGCTCCAAATACAAGGACAGTAATGGCAATTCTTGGTCCTTGTGACATAGTTGATGAAGTTACCGGAGAACTAAAGCTTCTTTGAAGATTTTTAAATGCTACGCAGATCAGAATGCAACGTTGCAATTGAAAATGTAATTTTTTTTGGTATA
GCGACAACTACCAGGGCTATGATTCAGGCCCAGTGTTGTATTGCCATCTTTCCATTTGTTCAGGAAGAGAATTGAAACATTTAACTAAAAGAAAATCAATGTTGTTGTATGTTCTTCCAAGCTTGGGGAAAAGAATATTTAAAAGAGAGAAAATAAATAAACAAAAGGTTTTATTTGCTACCTTTCGAGAAACTGAAAGC
TTAAATGATTTAAGAGGAATCCACTGTGTCATTTGTTAGTCAGTGCGCAACACTGCTCTTTTGGACATAAGAATTAACCAATGAACTTCTGCATCACAATTTTGCTAGAAGAGTACTTGCATGGTAAGATTATCAGCAGAAAGCAAGACTTTTGCAAAATATGAATTATATGATAAGCTGTAAATAATCTCCTTTGGAAG
AAGGGGAAACTATTACTGTAAGC