sp|Q94B38|GPT2_ARATH ----> Glucose-6-phosphate/phosphate translocator 2, chloroplastic
Intron 1 GTATAATATT ... TCATTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 10 | 18 | 0 | 4 |
| A2 | 7.69 | 12 | 0 | 2 |
| A3 | 0 | 8 | 0 | 0 |
| A4 | 100 | 0 | 0 | 2 |
| A5 | 0 | 4 | 0 | 0 |
| A6 | 9.68 | 56 | 0 | 12 |
| A7 | 12.38 | 115 | 6.5 | 26 |
| A8 | 8.94 | 163 | 9 | 23 |
| A9 | 14.13 | 161 | 15 | 38 |
| A10 | 13.58 | 105 | 15 | 18 |
>TRINITY_DN45028_c0_g1_i5 from sample A8 / Example spliced isoformCAATCTATTAATATCTCTACTTTCTATTTGCTCTCTTCGTGGCTCATATGCATCGATCTCTTCATTTCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCAAAGGATTTATGGGTGCCATGATATCCAACCTGGCATTTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGC
GGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTACTGGATGGCAGAACGCTATGAACGCCTTGGTCAGAGTGTGCAAAGGCAACACAATGAAAAGGGTTTTCATTATTGTTTCATGTATCATTATCTTCCACACACCAGTAATCCCCATTAGCGCTATCGGAGCGACGGTTGCCATTTTGAGTACATT
CGCACGCAAAGGAATGACGAACATACAGAAATACAATGCTCTTTTCAAAATGACATGGAAGAACATCCAAGTCCCTGTCAGCTCATTTTCATGTTCGACTCGATTGTGAGACTGGTACGTCATTTTTATTTTCATGTTGGACTTGATTGTCTTTCAGATTTGCGTGTTGAAGAGCCGCGGTGTGTTTTTGTTTGTGATGT
GTTTACCTACGTGCTGTGTTTTTGTGTGTGATGCCTTTTTGTGTTTAGTGTTTGTTGTAATTTATGTATTTTATTTTCTGTTGTATTTGTGATTACTGAGAGCGGAGAGGAGACCGTGCGAGGAAAATGTTTAGACCACGAGAGAGGAGAG
>TRINITY_DN45028_c0_g1_i2 from sample A8 / Example unspliced isoform:CAATCTATTAATATCTCTACTTTCTATTTGCTCTCTTCGTGGCTCATATGCATCGATCTCTTCATTTCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCAAAGGATTTATGGGTGCCATGATATCCAACCTGGCATTTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGC
GGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTACTGGATGGCAGAACGCTATGAACGCCTTGGTCAGAGTGTGCAAAGGCAACACAATGAAAAGGGTTTTCATTATTGTTTCATGTATCATTATCTTCCACACACCAGTAATCCCCATTAGCGCTATCGGAGCGACGGTTGCCATTTTGAGTACATT
CGCACgtataatatttgtatttgtaatgcattcttgttgataaatccttaacctggtaaactgaaaatagcaaatgttcatgtgaagacatgaaaatatatctcggatgatggtacctattgacttggatttcatttgcagGCAAAGGAATGACGAACATACAGAAATACAATGCTCTTTTCAAAATGACATGGAAGAAC
ATCCAAGTCCCTGTCAGCTCATTTTCATGTTCGACTCGATTGTGAGACTGGTACGTCATTTTTATTTTCATGTTGGACTTGATTGTCTTTCAGATTTGCGTGTTGAAGAGCCGCGGTGTGTTTTTGTTTGTGATGTGTTTACCTACGTGCTGTGTTTTTGTGTGTGATGCCTTTTTGTGTTTAGTGTTTGTTGTAATTTA
TGTATTTTATTTTCTGTTGTATTTGTGATTACTGAGAGCGGAGAGGAGACCGTGCGAGGAAAATGTTTAGACCACGAGAGAGGAGAG
Intron 2 GTACTGTAAA ... CATACTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 39.56 | 6.5 | 5.5 | 3 |
| A2 | 33.33 | 6 | 2 | 4 |
| A3 | 40 | 6 | 3 | 5 |
| A4 | 42.86 | 6 | 2 | 7 |
| A5 | 60 | 3 | 2 | 7 |
| A6 | 44.98 | 52 | 22 | 63 |
| A7 | 58.92 | 72 | 80.5 | 126 |
| A8 | 57.95 | 63.5 | 83 | 92 |
| A9 | 53.8 | 117.5 | 111.5 | 162 |
| A10 | 45.34 | 119 | 75.5 | 122 |
>TRINITY_DN106757_c0_g1_i3 from sample A1 / Example spliced isoformCATGGCTCATATGCATCGATCTCTTCATTTCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCACAGGATTTATGGGTGCCATGATATCTAACCTGGCATGTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGCGGCATGAACTACTCTGCATGACACCGTTTTCGTTTGA
TGTGGGCTGCTGGATGGCAGAACGCTATGAACGCCGTTGGTCCTCAATTTGCATGATATTTTCACTGCTATGTTGTTCTTTTTAGACATTATATATATAATAATAATACTGTGACAATTATTCTAACCTTCAATAATTGACTCTCCAGGTTGGTAGTTGGTCAGAGTGTGTTCAAAATGAAATATCGCCATTAACATTCA
GCAAAGGCAACACAATGAAAAGGGTTTTCACTATTGTTTCATCTATCATTATCTTCCACACACCAGTAATCCCCATTAGCGCTATCGGAGCGACGGTTGCCATTTTGAGTACATTCCTATATTCGCAGGCAAAGGAATGACGAACATACAGAAAGACAATGCTCTTTTCAAAATGAGATGGAAGAACATCCAAGTCCCTG
TCAGCTCATTTTCATGTTCGACTCGATTGTGAGACTGTCACGCCATTTTCATTTTCATGTTGGACTTGATTGTGTTTCAGATTTGCGTGTTGAAGAGCGGCGGTGTGTTTTTGTTTGTGATGTGTTTACCTACGTCCTGTGTTTTTCTGTTTGGTGTTTGTTGTAATTTATGTATTTTATTTTCTGTTGTATTTGTGATT
ACTGAGAGAGGAA
>TRINITY_DN106757_c0_g1_i2 from sample A1 / Example unspliced isoform:CATGGCTCATATGCATCGATCTCTTCATTTCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCACAGgtactgtaaattctcggtatctcggtgccccctaggagaacattttccactgcgtgtctacttgtcttttctgcatatcaatattaattcatactacagGATTTATGGGTGCCATGATATCTAACCTGG
CATGTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGCGGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTGCTGGATGGCAGAACGCTATGAACGCCGTTGGTAGTTGGTCAGAGTGTGTTCAAAATGAAATATCGCCATTAACATTCAGCAAAGGCAACACA
ATGAAAAGGGTTTTCACTATTGTTTCATCTATCATTATCTTCCACACACCAGTAATCCCCATTAGCGCTATCGGAGCGACGGTTGCCATTTTGAGTACATTCCTATATTCGCAGGCAAAGGAATGACGAACATACAGAAAGACAATGCTCTTTTCAAAATGAGATGGAAGAACATCCAAGTCCCTGTCAGCTCATTTTCA
TGTTCGACTCGATTGTGAGACTGTCACGCCATTTTCATTTTCATGTTGGACTTGATTGTGTTTCAGATTTGCGTGTTGAAGAGCGGCGGTGTGTTTTTGTTTGTGATGTGTTTACCTACGTCCTGTGTTTTTCTGTTTGGTGTTTGTTGTAATTTATGTATTTTATTTTCTGTTGTATTTGTGATTACTGAGAGAGGAA
Intron 3 GTTGGTCCTC ... ATGTTGGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.67 | 2 | 4 | 0 |
| A2 | 50 | 1 | 1 | 0 |
| A3 | 70 | 3 | 7 | 0 |
| A4 | 57.14 | 3 | 4 | 1 |
| A5 | 50 | 1 | 1 | 0 |
| A6 | 50.64 | 19.5 | 20 | 12 |
| A7 | 64.93 | 53.5 | 99 | 32 |
| A8 | 71.51 | 31.5 | 79 | 23 |
| A9 | 70.91 | 55 | 134 | 41 |
| A10 | 66.09 | 57.5 | 112 | 30 |
>TRINITY_DN45028_c0_g1_i5 from sample A8 / Example spliced isoformCAATCTATTAATATCTCTACTTTCTATTTGCTCTCTTCGTGGCTCATATGCATCGATCTCTTCATTTCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCAAAGGATTTATGGGTGCCATGATATCCAACCTGGCATTTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGC
GGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTACTGGATGGCAGAACGCTATGAACGCCTTGGTCAGAGTGTGCAAAGGCAACACAATGAAAAGGGTTTTCATTATTGTTTCATGTATCATTATCTTCCACACACCAGTAATCCCCATTAGCGCTATCGGAGCGACGGTTGCCATTTTGAGTACATT
CGCACGCAAAGGAATGACGAACATACAGAAATACAATGCTCTTTTCAAAATGACATGGAAGAACATCCAAGTCCCTGTCAGCTCATTTTCATGTTCGACTCGATTGTGAGACTGGTACGTCATTTTTATTTTCATGTTGGACTTGATTGTCTTTCAGATTTGCGTGTTGAAGAGCCGCGGTGTGTTTTTGTTTGTGATGT
GTTTACCTACGTGCTGTGTTTTTGTGTGTGATGCCTTTTTGTGTTTAGTGTTTGTTGTAATTTATGTATTTTATTTTCTGTTGTATTTGTGATTACTGAGAGCGGAGAGGAGACCGTGCGAGGAAAATGTTTAGACCACGAGAGAGGAGAG
>TRINITY_DN45028_c0_g1_i4 from sample A8 / Example unspliced isoform:CAATCTATTAATATCTCTACTTTCTATTTGCTCTCTTCGTGGCTCATATGCATCGATCTCTTCATTTCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCAAAGGATTTATGGGTGCCATGATATCCAACCTGGCATTTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGC
GGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTACTGGATGGCAGAACGCTATGAACGCCgttggtcctcaatttgcatgatatattcactgctatgttgttctttttagacattatatgtataataataatactgtgacaattattctaaccttcaaaaattgactctccatgttggtagTTGGTCA
GAGTGTGCAAAGGCAACACAATGAAAAGGGTTTTCATTATTGTTTCATGTATCATTATCTTCCACACACCAGTAATCCCCATTAGCGCTATCGGAGCGACGGTTGCCATTTTGAGTACATTCGCACGTATAATATTTGTATTTGTAATGCATTCTTGTTGATAAATCCTTAACCTGGTAAACTGAAAATAGCAAATGTTC
ATGTGAAGACATGAAAATATATCTCGGATGATGGTACCTATTGACTTGGATTTCATTTGCAGGCAAAGGAATGACGAACATACAGAAATACAATGCTCTTTTCAAAATGACATGGAAGAACATCCAAGTCCCTGTCAGCTCATTTTCATGTTCGACTCGATTGTGAGACTGGTACGTCATTTTTATTTTCATGTTGGACT
TGATTGTCTTTCAGATTTGCGTGTTGAAGAGCCGCGGTGTGTTTTTGTTTGTGATGTGTTTACCTACGTGCTGTGTTTTTGTGTGTGATGCCTTTTTGTGTTTAGTGTTTGTTGTAATTTATGTATTTTATTTTCTGTTGTATTTGTGATTACTGAGAGCGGAGAGGAGACCGTGCGAGGAAAATGTTTAGACCACGAGA
GAGGAGAG
Intron 4 GTTGGTCCTC ... GACTCTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 35.14 | 12 | 4 | 9 |
| A2 | 17.65 | 14 | 1 | 5 |
| A3 | 30.77 | 18 | 7 | 9 |
| A4 | 24.32 | 14 | 4 | 5 |
| A5 | 11.11 | 4 | 1 | 0 |
| A6 | 24.41 | 96 | 20 | 42 |
| A7 | 33.55 | 209 | 98 | 113 |
| A8 | 36.83 | 134.7 | 79 | 78 |
| A9 | 35.22 | 218 | 133 | 104 |
| A10 | 36.04 | 205 | 110 | 121 |
>TRINITY_DN106757_c0_g1_i2 from sample A1 / Example spliced isoformCATGGCTCATATGCATCGATCTCTTCATTTCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCACAGGTACTGTAAATTCTCGGTATCTCGGTGCCCCCTAGGAGAACATTTTCCACTGCGTGTCTACTTGTCTTTTCTGCATATCAATATTAATTCATACTACAGGATTTATGGGTGCCATGATATCTAACCTGG
CATGTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGCGGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTGCTGGATGGCAGAACGCTATGAACGCCGTTGGTAGTTGGTCAGAGTGTGTTCAAAATGAAATATCGCCATTAACATTCAGCAAAGGCAACACA
ATGAAAAGGGTTTTCACTATTGTTTCATCTATCATTATCTTCCACACACCAGTAATCCCCATTAGCGCTATCGGAGCGACGGTTGCCATTTTGAGTACATTCCTATATTCGCAGGCAAAGGAATGACGAACATACAGAAAGACAATGCTCTTTTCAAAATGAGATGGAAGAACATCCAAGTCCCTGTCAGCTCATTTTCA
TGTTCGACTCGATTGTGAGACTGTCACGCCATTTTCATTTTCATGTTGGACTTGATTGTGTTTCAGATTTGCGTGTTGAAGAGCGGCGGTGTGTTTTTGTTTGTGATGTGTTTACCTACGTCCTGTGTTTTTCTGTTTGGTGTTTGTTGTAATTTATGTATTTTATTTTCTGTTGTATTTGTGATTACTGAGAGAGGAA
>TRINITY_DN106757_c0_g1_i3 from sample A1 / Example unspliced isoform:CATGGCTCATATGCATCGATCTCTTCATTTCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCACAGGATTTATGGGTGCCATGATATCTAACCTGGCATGTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGCGGCATGAACTACTCTGCATGACACCGTTTTCGTTTGA
TGTGGGCTGCTGGATGGCAGAACGCTATGAACGCCgttggtcctcaatttgcatgatattttcactgctatgttgttctttttagacattatatatataataataatactgtgacaattattctaaccttcaataattgactctccagGTTGGTAGTTGGTCAGAGTGTGTTCAAAATGAAATATCGCCATTAACATTCA
GCAAAGGCAACACAATGAAAAGGGTTTTCACTATTGTTTCATCTATCATTATCTTCCACACACCAGTAATCCCCATTAGCGCTATCGGAGCGACGGTTGCCATTTTGAGTACATTCCTATATTCGCAGGCAAAGGAATGACGAACATACAGAAAGACAATGCTCTTTTCAAAATGAGATGGAAGAACATCCAAGTCCCTG
TCAGCTCATTTTCATGTTCGACTCGATTGTGAGACTGTCACGCCATTTTCATTTTCATGTTGGACTTGATTGTGTTTCAGATTTGCGTGTTGAAGAGCGGCGGTGTGTTTTTGTTTGTGATGTGTTTACCTACGTCCTGTGTTTTTCTGTTTGGTGTTTGTTGTAATTTATGTATTTTATTTTCTGTTGTATTTGTGATT
ACTGAGAGAGGAA
Intron 5 GTGAGACTGT ... GATTACTGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 2 | 2 |
| A2 | 64.71 | 3 | 7 | 4 |
| A3 | 77.78 | 3 | 9 | 12 |
| A4 | 100 | 0 | 0 | 5 |
| A5 | 84.62 | 1 | 3 | 8 |
| A6 | 71.3 | 31 | 58 | 96 |
| A7 | 80.71 | 38 | 149 | 169 |
| A8 | 74.76 | 67 | 175 | 222 |
| A9 | 69.17 | 84 | 179 | 198 |
| A10 | 83.23 | 28 | 113 | 165 |
>TRINITY_DN45028_c0_g1_i10 from sample A8 / Example spliced isoformAGAACGCTATGAACGCCGTTGGTAGTTGGTCAGAGTGTGTTCAAAATGAAATATCGCCATTAACATTCAGCAAAGGCAACACAATGAAAAGGGTTTTCACTATTGTTTCATCTATCATTATCTTCCACACACCAGTAATCCCCATTAGCGCTATCGGAGTGACGGTTGCCATTTTGAGTACATTCCTACATTCGCAGGCA
AAGGAATGACGAACATACAGAAGGACAATGCTCTTTTCAAAATGAGATGGAAGAACATCCAAGTCCCTGTCAGTTCATTTTCATGTTCGACTCGATTAGAGGAGAGGAGGCCGTGCGAGGAACATGTTTAGAGCACGAGAGAGGAGAGGAGGATTTTCCGCTACGATCTGTGTCAAACTTAGGAG
>TRINITY_DN45028_c0_g1_i13 from sample A8 / Example unspliced isoform:AGAACGCTATGAACGCCGTTGGTAGTTGGTCAGAGTGTGTTCAAAATGAAATATCGCCATTAACATTCAGCAAAGGCAACACAATGAAAAGGGTTTTCACTATTGTTTCATCTATCATTATCTTCCACACACCAGTAATCCCCATTAGCGCTATCGGAGCGACGGTTGCCATTTTGAGTACATTCCTATATTCGCAGGCA
AAGGAATGACGAACATACAGAAAGACAATGCTCTTTTCAAAATGAGATGGAAGAACATCCAAGTCCCTGTCAGCTCATTTTCATGTTCGACTCGATTgtgagactgtcacgccattttcattttcatgttggacttgattgtgtttcagatttgcgtgttgaagagcggcggtgtgtttttgtttgtgatgtgtttacct
acgtcctgtgtttttctgtttggtgtttgttgtaatttatgtattttattttctgttgtatttgtgattactgagAGAGGAGAGGAGGCCGTGCGAGGAACATGTTTAGAGCACGAGAGAGGAGAGGAGGATTTTCCGCTACGATCTGTGTCAAACTTAGGAG
Intron 6 GTACTGTAAA ... AATATTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 12.5 | 7 | 2 | 0 |
| A2 | 14.29 | 6 | 0 | 2 |
| A3 | 36.84 | 6 | 3 | 4 |
| A4 | 25 | 6 | 0 | 4 |
| A5 | 14.29 | 3 | 0 | 1 |
| A6 | 31.17 | 53 | 8 | 40 |
| A7 | 37.82 | 74 | 26 | 64 |
| A8 | 47.54 | 64 | 51 | 65 |
| A9 | 46.93 | 121 | 80 | 134 |
| A10 | 40.89 | 120 | 55 | 111 |
>TRINITY_DN44136_c2_g1_i6 from sample A9 / Example spliced isoformGTTTGAGAACATAAATTTACCGTTCGATGACCTAAAAAAATGATCCAACGGTTCAATTTGAAATTTGGTTGTAGTTGGATGATAAAGCAGATCCAATGGCTTCGTTTAATCATATGACTCTGCATCAATCTATTAATATCTCTAATATCTCTACTTTCTATTTGCTCTCTTCATGGCTCATATGCATCGATCTCTTCATT
TCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCACAGGATTTATGGGTGCCATGATATCTAACCTGGCATGTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGCGGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTGCTGGATGGCAGAACGCTATG
AAC
>TRINITY_DN44136_c2_g1_i5 from sample A9 / Example unspliced isoform:GTTTGAGAACATAAATTTACCGTTCGATGACCTAAAAAAATGATCCAACGGTTCAATTTGAAATTTGGTTGTAGTTGGATGATAAAGCAGATCCAATGGCTTCGTTTAATCATATGACTCTGCATCAATCTATTAATATCTCTAATATCTCTACTTTCTATTTGCTCTCTTCATGGCTCATATGCATCGATCTCTTCATT
TCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCACAGgtactgtaaattctcggtacctcggtgcctcctaggagaacattgtctttgctgcgtatcataggggtctgctctatttcaatattacagGATTTATGGGTGCCATGATATCCAACCTGGCATTTGTGTTCTAGAACATACTCTCCAAGAAAGGAATG
GAGGGGAAAGGGAAGTCAGTGGGCGGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCT
Intron 7 GTACTGTAAA ... AATATTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 46.15 | 7 | 8 | 4 |
| A2 | 20 | 6 | 1 | 2 |
| A3 | 40 | 6 | 3 | 5 |
| A4 | 29.41 | 6 | 0 | 5 |
| A5 | 25 | 3 | 1 | 1 |
| A6 | 36.9 | 53 | 15 | 47 |
| A7 | 46.18 | 74 | 46 | 81 |
| A8 | 56.16 | 64 | 80 | 84 |
| A9 | 50.91 | 121 | 110 | 141 |
| A10 | 46.07 | 120 | 84 | 121 |
>TRINITY_DN44136_c2_g1_i6 from sample A9 / Example spliced isoformGTTTGAGAACATAAATTTACCGTTCGATGACCTAAAAAAATGATCCAACGGTTCAATTTGAAATTTGGTTGTAGTTGGATGATAAAGCAGATCCAATGGCTTCGTTTAATCATATGACTCTGCATCAATCTATTAATATCTCTAATATCTCTACTTTCTATTTGCTCTCTTCATGGCTCATATGCATCGATCTCTTCATT
TCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCACAGGATTTATGGGTGCCATGATATCTAACCTGGCATGTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGCGGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTGCTGGATGGCAGAACGCTATG
AAC
>TRINITY_DN44136_c2_g1_i4 from sample A9 / Example unspliced isoform:GTTTGAGAACATAAATTTACCGTTCGATGACCTAAAAAAATGATCCAACGGTTCAATTTGAAATTTGGTTGTAGTTGGATGATAAAGCAGATCCAATGGCTTCGTTTAATCATATGACTCTGCATCAATCTATTAATATCTCTAATATCTCTACTTTCTATTTGCTCTCTTCATGGCTCATATGCATCGATCTCTTCATT
TCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCACAGgtactgtaaattctcggtacctcggtgcctcctaggagaacattttccactcgctgtctacttgtctttgctgcgtatcataggggtctgctctatttcaatattacagGATTTATGGGTGCCATGATATCTAACCTGGCATGTGTGTTCTAGAACAT
ACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGCGGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTACT
Intron 8 GTATTGTTAA ... AAACTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 3 | 3 | 0 |
| A2 | 27.27 | 4 | 1 | 2 |
| A3 | 11.11 | 4 | 0 | 1 |
| A4 | 26.32 | 7 | 1 | 4 |
| A5 | 33.33 | 7 | 2 | 5 |
| A6 | 27.91 | 62 | 12 | 36 |
| A7 | 28.16 | 125 | 51 | 47 |
| A8 | 37.2 | 92 | 46 | 63 |
| A9 | 27.31 | 161 | 46 | 75 |
| A10 | 31.21 | 119 | 27 | 81 |
>TRINITY_DN45028_c0_g1_i1 from sample A8 / Example spliced isoformCAATCTATTAATATCTCTACTTTCTATTTGCTCTCTTCGTGGCTCATATGCATCGATCTCTTCATTTCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCACAGGTACTGTAAATTCTCGGTATCTCGGTGCCCCCTAGGAGAACATTTTCCACTGCGTGTCTACTTGTCTTTTCTGCATATCAATATTAATTCAT
ACTACAGGATTTATGGGTGCCATGATATCTAACCTGGCATTTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGCGGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTACTGGATGGCAGAACGCTATGAACGCC
>TRINITY_DN45028_c0_g1_i12 from sample A8 / Example unspliced isoform:CAATCTATTAATATCTCTACTTTCTATTTGCTCTCTTCGTGGCTCATATGCATCGATCTCTTCATTTCATTTCTCAATGGCTCATATGTAATATGTGAAGTCTCACAGGTACTGTAAATTCTCGGTATCTCGGTGCCCCCTAGGAGAACATTTTCCACTGCGTGTCTACTTGTCTTTTCTGCATATCAATATTAATTCAT
ACTACAGgtattgttaattggctctatttcaatattacaggtattgttaattcaaatcgctttgctttggtcttgctgattatcatgtgaaggattaattcatctcgcttttctttggtattgataattatcatgggcaaagaagattgaaaatgtttgcacaaaacttgcagGATTTATGGGTGCCATGATATCTAACC
TGGCATTTGTGTTCTAGAACATACTCTCCAAGAAAGGAATGGAGGGGAAAGGGAAGTCAGTGGGCGGCATGAACTACTCTGCATGACACCGTTTTCGTTTGATGTGGGCTACTGGATGGCAGAACGCTATGAACGCC