sp|Q6KAE5|XB32_ORYSJ ----> Probable E3 ubiquitin-protein ligase XBOS32

Intron 1 GTATTTTGCT ... GTAGCTTTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	36.46	373	34	214
A2	37.84	299	12	182
A3	32.71	360	19	175
A4	34.22	369	17	192
A5	35.77	158	8	88
A6	31.99	372	33	175
A7	30.8	591	54	263
A8	28.57	195	20	78
A9	29.05	530	36	217
A10	32.15	650	37	308

>TRINITY_DN36934_c1_g2_i3 from sample A9 / Example spliced isoform

CGGGACGGTCACATGGAGAGAGGGCTTTTGAAGCTTTGTCAATTTCCGAGTTGGTCGCATGCAATAAAAACAAAAAAACCGTCTCGTAAATCGTCTTTATTTCGACCGAGAATTCAAGAATAAATGCGTCGTAGGATCGAATCCCGACCGCTGCCAAATATTTGCTGATGCGGAGGCCCAGAGCAGATTGGAGTTTCGGG
AGCCATCCAGTTCGGTAACTCATTTGAAGCCTTGTCAAACAAAATGAGAATATTGAATTTCATGGGCAATTCCTTTGGATGTTCTGCTTCTGGAGAACGTCTGGTTTCTGCTGCTAGAGATGGAGATTTGCAAGAGGCTAAGGCTTTATTGGAATGCAACCCTCGTCTTGCAAAGTATTCAACTTTTGGTGTTCGAAATT
CTCCTCTGCATTATTCAGCAGCTCAAGGACACAATGAGATTGTCTCTCTCTTGCTTGAATCTGGGGTTGATGTGAATATCCGGAACTATTGTGGTCAGACAGCTTTGATGCAA

>TRINITY_DN36934_c1_g2_i1 from sample A9 / Example unspliced isoform:

CGGGACGGTCACATGGAGAGAGGGCTTTTGAAGCTTTGTCAATTTCCGAGTTGGTCGCATGCAATAAAAACAAAAAAACCGTCTCGTAAATCGTCTTTATTTCGACCGAGAATTCAAGAATAAATGCGTCGTAGGATCGAATCCCGACCGCTGCCAAATATTTGCTGATGCGGAGGCCCAGAGCAGgtattttgctgata
cagatctcgctgaaattttgtgcgatgaagcctttattactgtctttaacgttattgttgattgagttttaagaattaaatcggcgagaatgacggaaatttgttagatcaacgagtgccaaatggtccggcatcgtttgaagtacaagttacgaaattaattgtatatgaaaacagaaatccagttttatgcagaaaat
ccgtggaaagacgagtctaaattcgtataaaatgcaatgcgaagattgactgtatatgtctgaaggtagagttcaagaaaaggaaattaaagttgaaaattgctgtactggccatgtcccgcggaaagtattattgttgaaaccctaaaatagtgaacaatattgaacggaagagctacgatgaacaaatgacagggtgt
ttgaaaggaatttagtgcgcaatcgttgaagattggaggccggctgaaaattttaaatttactggttgaattttgaacatcttttgagtcaaatttaggacataattttattggctggatcagaggattcgggcgaattttgatcatccatcaaaatttgagtagaagctaggaaagaataataatgaaatgacaaataa
tagtacaaacaagcaagtttccgagatattagcaaccgaagcaaaatctttatatttgataagccatgccaattttgagtaaatcaaatctccaatgaaatcttagcaaaggccagcaaaatttaacaaaagataatgttgaccaaagaatcaaacaacggaatctaagagcaaggaaatgatgaaaatttaagcggaga
aacaaaatattaatgcatgggaaagacttccgttgattcgcaggattttgtggaacctgaggaccttcattagccaaggaggcatgcgcatctcactgcgtgtagctttagATTGGAGTTTCGGGAGCCATCCAGTTCGGTAACTCATTTGAAGCCTTGTCAAACAAAATGAGAATATTGAATTTCATGGGCAATTCCTT
TGGATGTTCTGCTTCTGGAGAACGTCTGGTTTCTGCTGCTAGAGATGGAGATTTGCAAGAGGCTAAGGCTTTATTGGAATGCAACCCTCGTCTTGCAAAGTATTCAACTTTTGGTGTTCGAAATTCTCCTCTGCATTATTCAGCAGCTCAAGGACACAATGAGATTGTCTCTCTCTTGCTTGAATCTGGGGTTGATGTGA
ATATCCGGAACTATTGTGGTCAGACAGCTTTGATGCAA

Intron 2 GTATTTTGCT ... TGATTCGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	41.94	36	34	18
A2	40	18	12	12
A3	54.55	15	19	17
A4	36	24	17	10
A5	51.52	8	8	9
A6	33.86	42	33	10
A7	33.66	67	54	14
A8	31.58	26	20	4
A9	33.33	50	36	14
A10	32.92	54	37	16

>TRINITY_DN36934_c1_g2_i2 from sample A9 / Example spliced isoform

CGGGACGGTCACATGGAGAGAGGGCTTTTGAAGCTTTGTCAATTTCCGAGTTGGTCGCATGCAATAAAAACAAAAAAACCGTCTCGTAAATCGTCTTTATTTCGACCGAGAATTCAAGAATAAATGCGTCGTAGGATCGAATCCCGACCGCTGCCAAATATTTGCTGATGCGGAGGCCCAGAGCAGGATTTTGTGGAACC
TGAGGACCTTCATTAGCCAAGGAGGCATGCGCATCTCACTGCGTGTAGCTTTAGATTGGAGTTTTGGGAGCCATCCAGTTCGGTAACTCATTTGAAGCCTTGTCAAACAAAATGAGAATATTGAATTTCATGGGCAATTCCTTTGGATGTTCTGCTTCTGGAGAACGTCTGGTTTCTGCTGCTAGAGATGGAGATTTGCA
AGAGGCTAAGGCTTTATTGGAATGCAACCCTCGTCTTGCAAAGTATTCAACTTTTGGTGTTCGAAATTCTCCTCTGCATTATTCAGCAGCTCAAGGACACAATGAGATTGTCTCTCTCTTGCTTGAATCTGGGGTTGATGTGAATATCCGGAACTATTGTGGTCAGACAGCTTTGATGCAA

>TRINITY_DN36934_c1_g2_i1 from sample A9 / Example unspliced isoform:

CGGGACGGTCACATGGAGAGAGGGCTTTTGAAGCTTTGTCAATTTCCGAGTTGGTCGCATGCAATAAAAACAAAAAAACCGTCTCGTAAATCGTCTTTATTTCGACCGAGAATTCAAGAATAAATGCGTCGTAGGATCGAATCCCGACCGCTGCCAAATATTTGCTGATGCGGAGGCCCAGAGCAGgtattttgctgata
cagatctcgctgaaattttgtgcgatgaagcctttattactgtctttaacgttattgttgattgagttttaagaattaaatcggcgagaatgacggaaatttgttagatcaacgagtgccaaatggtccggcatcgtttgaagtacaagttacgaaattaattgtatatgaaaacagaaatccagttttatgcagaaaat
ccgtggaaagacgagtctaaattcgtataaaatgcaatgcgaagattgactgtatatgtctgaaggtagagttcaagaaaaggaaattaaagttgaaaattgctgtactggccatgtcccgcggaaagtattattgttgaaaccctaaaatagtgaacaatattgaacggaagagctacgatgaacaaatgacagggtgt
ttgaaaggaatttagtgcgcaatcgttgaagattggaggccggctgaaaattttaaatttactggttgaattttgaacatcttttgagtcaaatttaggacataattttattggctggatcagaggattcgggcgaattttgatcatccatcaaaatttgagtagaagctaggaaagaataataatgaaatgacaaataa
tagtacaaacaagcaagtttccgagatattagcaaccgaagcaaaatctttatatttgataagccatgccaattttgagtaaatcaaatctccaatgaaatcttagcaaaggccagcaaaatttaacaaaagataatgttgaccaaagaatcaaacaacggaatctaagagcaaggaaatgatgaaaatttaagcggaga
aacaaaatattaatgcatgggaaagacttccgttgattcgcagGATTTTGTGGAACCTGAGGACCTTCATTAGCCAAGGAGGCATGCGCATCTCACTGCGTGTAGCTTTAGATTGGAGTTTCGGGAGCCATCCAGTTCGGTAACTCATTTGAAGCCTTGTCAAACAAAATGAGAATATTGAATTTCATGGGCAATTCCTT
TGGATGTTCTGCTTCTGGAGAACGTCTGGTTTCTGCTGCTAGAGATGGAGATTTGCAAGAGGCTAAGGCTTTATTGGAATGCAACCCTCGTCTTGCAAAGTATTCAACTTTTGGTGTTCGAAATTCTCCTCTGCATTATTCAGCAGCTCAAGGACACAATGAGATTGTCTCTCTCTTGCTTGAATCTGGGGTTGATGTGA
ATATCCGGAACTATTGTGGTCAGACAGCTTTGATGCAA