sp|Q11207|PARP2_ARATH ----> Poly [ADP-ribose] polymerase 2
Intron 1 GTAACCTCTA ... GATTGTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 45.45 | 12 | 3 | 17 |
| A2 | 19.64 | 6 | 2 | 1 |
| A3 | 31.43 | 12 | 6 | 5 |
| A4 | 47.53 | 8 | 6 | 8.5 |
| A5 | 66.44 | 2 | 1 | 7 |
| A6 | 32.5 | 3 | 0 | 3 |
| A7 | 14.34 | 19 | 2 | 4.5 |
| A8 | 33.33 | 2 | 2 | 0 |
| A9 | 36.66 | 3 | 2 | 1.5 |
| A10 | 33.33 | 1 | 0 | 1 |
>TRINITY_DN118432_c10_g1_i2 from sample A1 / Example spliced isoformCACACTGTATTTTTTTTGGAATAGAGAACAATAGAATGCTATTCTTTTTTATGATATAAGGTTATATTTAATTTTATTTAATTGCATGCGATGTCCTAGAAGCCTTTTAACAAATTGTTAGTAATTTTTGAATGACAAATTATAGAAGCTGACATTGGAGGGAAATATATGGTATACAATCACTGGGGCAGAGTTGGTGC
TAAGGGTCAAGATAAGCTATTTGGTCCTTTTGTGTCACGTGAGGAAGCAATTTCAGAATTTGAGTCAAAGTTCTTTGACAAAACAAAGAACCAATGGTGCAATCGACACAATTTCATTCCTTACCCAAAAAAGTATACTTGGTTAGAAATGGATTACGAGGAAGATAAATCAAGTAAACAAGGACAAAATGAAAAGAAGG
AAATTGATTCCATTGTTAAGCATCAACCTCGGCAAAGTGTGCTGGACAACCGCCTAGCACAATTTATCTCTCTCATATGCAATGTGAGCATGATGAAACAACAAATGATGGAGATTGGCTATAATGCTGAAAAGCTACCTCTTGGTAAGTTGAGCAAGGCAACTATCTTAAAGGGATATGAAGTATTGAAAAGGATTAGC
ATTGCAATTGAACAACGAAATAAAGACAGAGTACTTGATCAACTAAGCAGTGAATTCTATACAATAGTTCCGCATGATTTTGGCTTCAAAAAAATGCGTGAATTCATCATCGACACCCCTCAAAAATTGAAGCAGAAGCTAGAAATGGTTGAGGCATTGGGTGAAATCGAACTTGCAACGAAGTTGTTGAAGGATGATAC
TGAGGAAGAGGAAGATCCTCTATATTCTCATTACCAACGACTTCACTGCAATATTCTTCCACTTGATGAAGAATCTGAAGATGTTGCGTTGATAAAACGATACTTGACAAATACCCATGCTAAGACACATTCAAGTTATACAATTGAAATTTTACAAGTTTTCAAAGTTTCAAGAGAGGATGAAGATGAGCGCTTTGAAA
AATTTCACACTATAAAAAATCGGATGCTTTTATGGCATGGTTCAAGATTAACAAATTGGACAGGCATTCTTTCACAAGGTCTCAGAATTGCTCCCCCAGAAGCACCAGTTACTGGGTACATGTTTGGAAAGGGAGTGTATTTTGCTGATATGGTTTCTAAAAGTGCAAACTACTGCTATCCATCCCCTTCATCACCAGTC
GGTGTACTTCTATTGTGTGAGGTGGCGTTAGGTGACATGGTTGAACTTCGAGAATCAAATTATCATGCAGACAACTTGCCAACTGGAAAGCTAAGCACAAAAGGAGTTGGTGAAACAGCACCTGATCCATCAGAATTTTGCAGTCTTCCTGATGGAGTTGTTGTTCCATTGGGAACACCAAAGAAGCAATCTGCTACACG
AGCTTCACTTTTGTACAATGAGTTTATTGTTTACAATGTGGAACAAATACGCATGCGGTACATGCTCCAGGT
>TRINITY_DN118432_c10_g1_i8 from sample A1 / Example unspliced isoform:ACTCGTCGAAGGTCTTGCAAACTAAACGCCAAGTTGACAAAATATATTCCATTTGGGTATTGACTCGTTCACGCGCTCCCGCCAATTTATTGCTCTCTCCATCTCCATCCTTCACTTCATTTCAATTTCTTCTATCCGCTGCAGAGTTAAACCGGGAAGCCAAGGTATTTGGAGTGTCACCGATGGAACCCAATCAGCCA
TATAAGCTGAAAGTGCAAGAGCTTCGTGACGAGCTCGGCAAGCGTGGCCTGGATACAACTGGACGAAAGCCTGACCTGGCAGATCGACTTAATGCTGCTATTATAGATGAACTGAACTCAAAGGCGGGCAATGATCCCCATCTTAATGTGTCAGACATGGAAGTGGATAAGAGGAAAGGTGAAAATAACGGTAAAAAACA
TTCTATAGATGAAGAGAAAACAGATTCAGCAGTGGGCGGAGAGAAAAGGCACAAGGCATCAAATAAACAATCCCTCGACGAAGATGACAAAGATAGCAATACTTCCAAAAAGGATGACTCAGTAACAATAGCACATACTCTCAAAGTGCAAGAACTTCGAAATGAACTTGCTAAGCGTGGCCTTGATACTTCTGGACGGA
AGTCTGATTTGGTAGTAAGACTTGACAAAGCTATTATGGATGAACTGAAGTCAAATGATGGCAACATATCCACTGACAATTTAGACTCGGCAGTGAATAGGAAAATAAACAACATGCCCTCAACCAAACAACCTAGAGATGGAGGCATTACAGATGTTGTTTGTGTTAAGCAAAGGGATGGGTCCACAAACATTCGCTCC
CAAGATGGAGACAAAGATACGCAGAAATGTAAAGATGATGTGAAAATTACAAATTCAGTGACTGATGAAAAGAGAAACCAATCAATCTCAGAGAAAACATCTACACTCAAAGATGATAATGAGATTGATTCTTCCAAAAGAAAGAAAGTCATAGATATCAATGCTATGACTGTTGATGAGTTAAGGCGGGAGCTTTCTAC
TCGTGGACTTTCAACTTCTGGTACTAAGAAGGTTCTTGTTGAAAGGCTTGGTGCAATGATGAAGGACAGTTCAACTGCTGTCAAAATAGATGAACAAAATATGCAAGATCGAGGACCTGCCAAAATTTCAGAGCAAAAGATTGTTCTAGAGACTAAGAAGGGCAGTGCAGTCTTAGACAAGTGGCTTCCAGATGACATAA
AGTCCCATTATCACGTTTTGCATATAGGGGATAATATCTTTGATGCCATGCTGAATCAGACGAATGTCGGTGAAAATAACAACAAGTTTTATGTCATTCAAGCACTAGAAGCTGACATTGGAGGGAAATATATGGTATACAATCACTGGGGCAGAGTTGGTGCTAAGGGTCAAGATAAGCTATTTGGTCCTTTTGTGTCA
CGTGAGGAAGCAATTTCAGAATTTGAGTCAAAGTTCTTTGACAAAACAAAGAACCAATGGTGCAATCGACACAATTTCATTCCTTACCCAAAAAAGTATACTTGGTTAGAAATGGATTACGAGGAAGATAAATCAAGTAAACAAGGACAAAATGAAAAGAAGGAAATTGATTCCATTGTTAAGCATCAACCTCGGCAAAG
TGTGCTGGACAACCGCCTAGCACAATTTATCTCTCTCATATGCAATGTGAGCATGATGAAACAACAAATGATGGAGATTGgtaacctctatttcttttgtgccttttgttcttcttgttttttttctgaatggaactcatactttattgatagagaatagaatgtaattgaaaaaagtcacatgttgttggacggtatca
tttgtacttgtaggatgagcgcaactggtattttatttgtgcactaatagtggggtgatggatagaataaatgtcaagtggtatcttgttcactccgattattaagattgataattcatttgataaagaatgtttaactgccaaactttctgattgttcagGCTATAATGCTGAAAAGCTACCTCTTGGTAAGTTGAGCA
AGGCAACTATCTTAAAGGTAATCTATTTCACTTTTTCTTGTCTGGTGAATCTTGTATTTAACATGTAGCAGGAAGGTTTTGTGAGATTACCATTAGCAAAGACTTGTAGAGTAAATATAGAAACAAACTCTTCTTTTACCTCAGTCTTCTTCATGAATGTCATTTACTACTATTAATGGTAGGATATACTACTAGTGATA
GTAGGGTTTAGACTTGATGTGTATTTTGTTAGATACATTTAATCTTCTGGGC
Intron 2 GCAGATCGAC ... AATATGCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 77.78 | 4 | 16 | 12 |
| A2 | 73.33 | 8 | 31 | 13 |
| A3 | 60 | 7 | 16 | 5 |
| A4 | 60 | 5 | 10 | 5 |
| A5 | 50 | 3 | 5 | 1 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 44 | 7 | 8 | 3 |
| A8 | 71.43 | 1 | 2 | 3 |
| A9 | 47.37 | 5 | 5 | 4 |
| A10 | 55.56 | 6 | 7 | 8 |
>TRINITY_DN43197_c0_g1_i3 from sample A10 / Example spliced isoformTATTGCTCTCTCCATCTCCATCCTTCACTTCATTTCAATTTCTTCTATCCGCTGCAGAGTTAAACCGGGAAGCCAAGGTATTTGGAGTGTCACCGATGGAACCCAATCAGCCATATAAGCTGAAAGTGCAAGAGCTTCGTGACGAGCTCGGCAAGCGTGGCCTGGATACAACTGGACGAAAGCCTGACCTGATCGAGGAC
CTGCCAAAATTTCAGAGCAAAAGATTGTTCTAGAGACTAAGAAGGGCAGTGCAGTCTTAGACAAGTGGCTTCCAGATGACATAAAGTCCCATTATCACGTTTTGCATATAGGGGATAATATCTTTGATGCCATGCTGAATCAGACGAATGTCGGTGAAAATAACAACAAGTTTTATGTCATTCAAGCACTAGAAGCTGAC
ATTGGAGGGAAATATATGGTATACAATCGCTGGGGCAGAGTTGGTGTTAAGGGTCAAGATAAGCTATTTGGTCCTTTTGTGTCACGTGAGGAAGCAATTTCAGAATTTGAGTCAAAGTTCTTTGACAAAACAAAGAACCAATGGTGCAATCGACACAATTTCATTCCTTACCCAAAAAAGTATACTTGGTTAGAAATGGA
TTACGAGGAAGATAAATCAAGTAAACAAGGACAAAATGAAAAGAAGGAAATTGATTCCATTGTTAAGCATCAACCTCGGCAAAGTGTGCTGGACAACCGCCTAGCACAATTTATCTCTCTCATATGCAATGTGAGCATGATGAAACAACAAATGATGGAGATTGGCTATAATGCTGAAAAGCTACCTCTTGGTAAGTTGA
GCAAGGCAACTATCTTAAAGGGATATGAAGTATTGAAAAGGATTAGCATTGCAATTGAACAACGAAATAAAGACAGAGTACTTGATCAACTAAGCAGTGAATTCTATACAATAGTTCCGCATGATTTTGGCTTCAAAAAAATGCGTGAATTCATCATCGACACCCCTCAAAAATTGAAGCAGAAGCTAGAAATGGTTGAG
GCATTGGGTGAAATCGAACTTGCAACGAAGTTGTTGAAGGATGATACTGAGGAAGAGGAAGATCCTCTATATTCTCATTACCAACGACTTCACTGCAATATTCTTCCACTTGATGAAGAATCTGAAGATGTTGCGTTGATAAAACGATACTTGACAAATACCCATGCTAAGACACATTCAAGTTATACAATTGAAATTTT
ACAAGTTTTCAAAGTTTCAAGAGAGGATGAAGATGAGCGCTTTGAAAAATTTCACACTATAAAAAATCGGATGCTTTTATGGCATGGTTCAAGATTAACAAATTGGACAGGCATTCTTTCACAAGGTCTCAGAATTGCTCCCCCAGAAGCACCAGTTACTGGGTACATGTTTGGAAAGGGAGTGTATTTTGCTGATATGG
TTTCTAAAAGTGCAAACTACTGCTATCCATCCCCTTCATCACCAGTCGGTGTACTTCTATTGTGTGAGGTGGCGTTAGGTGACATGGTTGAACTTCGAGAATCAAATTATCATGCAGACAACTTGCCAACTGGAAAGCTAAGCACAAAAGGAGTTGGTGAAACAGCACCTGATCCATCAGAATTTTGCAGTCTTCCTGAT
GGAGTTGTTGTTCCATTGGGAACACCAAAGAAGCAATCTGCTACACGAGCTTCACTTTTGTACAATGAGTTTATTGTTTACAATGTGGAACAAATACGCATGCGGTACATGCTCCAGGTAAAATTTAACTTTAAACGATGAAGACAAAGGGAATAAGTCTATTGCGTCATATATAGACTTGTGTGATAGCAGCAATCACA
CAAAAAATCCTGAAGTCATAAATGCTATATGCTATGTATCATTTATATATTTATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
>TRINITY_DN43197_c0_g1_i1 from sample A10 / Example unspliced isoform:TATTGCTCTCTCCATCTCCATCCTTCACTTCATTTCAATTTCTTCTATCCGCTGCAGAGTTAAACCGGGAAGCCAAGGTATTTGGAGTGTCACCGATGGAACCCAATCAGCCATATAAGCTGAAAGTGCAAGAGCTTCGTGACGAGCTCGGCAAGCGTGGCCTGGATACAACTGGACGAAAGCCTGACCTGgcagatcga
cttaatgctgctattatagatgaactgaactcaaaggcgggcaatgatccccatcttaatgtgtcagacatggaagtggataagaggaaaggtgaaaataacggtaaaaaacattctatagatgaagagaaaacagattcagcagtgggcggagagaaaaggcacaaggcatcaaataaacaatccctcgacgaagatga
caaagatagcaatacttccaaaaaggatgactcagtaacaatagcacatactctcaaagtgcaagaacttcgaaatgaacttgctaagcgtggccttgatacttctggacggaagtctgatttggtagtaagacttgacaaagctattatggatgaactgaagtcaaatgatggcaacatatccactgacaatttagact
cggcagtgaataggaaaataaacaacatgccctcaaccaaacaacctagagatggaggcattacagatgttgtttgtgttaagcaaagggatgggtccacaaacattcgctcccaagatggagacaaagatacgcagaaatgtaaagatgatgtgaaaattacaaattcagtgactgatgaaaagagaaaccaatcaatc
tcagagaaaacatctacactcaaagatgataatgagattgattcttccaaaagaaagaaagtcatagatatcaatgctatgactgttgatgagttaaggcgggagctttctactcgtggactttcaacttctggtactaagaaggttcttgttgaaaggcttggtgcaatgatgaaggacagttcaactgctgtcaaaat
agatgaacaaaatatgcaagATCGAGGACCTGCCAAAATTTCAGAGCAAAAGATTGTTCTAGAGACTAAGAAGGGCAGTGCAGTCTTAGACAAGTGGCTTCCAGATGACATAAAGTCCCATTATCACGTTTTGCATATAGGGGATAATATCTTTGATGCCATGCTGAATCAGACGAATGTCGGTGAAAATAACAACAAGT
TTTATGTCATTCAAGCACTAGAAGCTGACATTGGAGGGAAATATATGGTATACAATCGCTGGGGCAGAGTTGGTGTTAAGGGTCAAGATAAGCTATTTGGTCCTTTTGTGTCACGTGAGGAAGCAATTTCAGAATTTGAGTCAAAGTTCTTTGACAAAACAAAGAACCAATGGTGCAATCGACACAATTTCATTCCTTAC
CCAAAAAAGTATACTTGGTTAGAAATGGATTACGAGGAAGATAAATCAAGTAAACAAGGACAAAATGAAAAGAAGGAAATTGATTCCATTGTTAAGCATCAACCTCGGCAAAGTGTGCTGGACAACCGCCTAGCACAATTTATCTCTCTCATATGCAATGTGAGCATGATGAAACAACAAATGATGGAGATTGGCTATAA
TGCTGAAAAGCTACCTCTTGGTAAGTTGAGCAAGGCAACTATCTTAAAGGGATATGAAGTATTGAAAAGGATTAGCATTGCAATTGAACAACGAAATAAAGACAGAGTACTTGATCAACTAAGCAGTGAATTCTATACAATAGTTCCGCATGATTTTGGCTTCAAAAAAATGCGTGAATTCATCATCGACACCCCTCAAA
AATTGAAGCAGAAGCTAGAAATGGTTGAGGCATTGGGTGAAATCGAACTTGCAACGAAGTTGTTGAAGGATGATACTGAGGAAGAGGAAGATCCTCTATATTCTCATTACCAACGACTTCACTGCAATATTCTTCCACTTGATGAAGAATCTGAAGATGTTGCGTTGATAAAACGATACTTGACAAATACCCATGCTAAG
ACACATTCAAGTTATACAATTGAAATTTTACAAGTTTTCAAAGTTTCAAGAGAGGATGAAGATGAGCGCTTTGAAAAATTTCACACTATAAAAAATCGGATGCTTTTATGGCATGGTTCAAGATTAACAAATTGGACAGGCATTCTTTCACAAGGTCTCAGAATTGCTCCCCCAGAAGCACCAGTTACTGGGTACATGTT
TGGAAAGGGAGTGTATTTTGCTGATATGGTTTCTAAAAGTGCAAACTACTGCTATCCATCCCCTTCATCACCAGTCGGTGTACTTCTATTGTGTGAGGTGGCGTTAGGTGACATGGTTGAACTTCGAGAATCAAATTATCATGCAGACAACTTGCCAACTGGAAAGCTAAGCACAAAAGGAGTTGGTGAAACAGCACCTG
ATCCATCAGAATTTTGCAGTCTTCCTGATGGAGTTGTTGTTCCATTGGGAACACCAAAGAAGCAATCTGCTACACGAGCTTCACTTTTGTACAATGAGTTTATTGTTTACAATGTGGAACAAATACGCATGCGGTACATGCTCCAGGTAAAATTTAACTTTAAACGATGAAGACAAAGGGAATAAGTCTATTGCGTCATA
TATAGACTTGTGTGATAGCAGCAATCACACAAAAAATCCTGAAGTCATAAATGCTATATGCTATGTATCATTTATATATTTATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA