sp|Q9FVG7|METK2_PINCO ----> S-adenosylmethionine synthase 2
Intron 1 GTATTTTTTT ... TTGTTATTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 46.23 | 9.3 | 9.3 | 5 |
| A2 | 30.2 | 25.1 | 16.9 | 5.4 |
| A3 | 24.07 | 20.1 | 8.6 | 4 |
| A4 | 39.88 | 10.6 | 8.1 | 6 |
| A5 | 4.35 | 11 | 0 | 1 |
| A6 | 34.18 | 9.2 | 5.2 | 4 |
| A7 | 32.95 | 23.5 | 16.2 | 6.4 |
| A8 | 46.77 | 10.5 | 12.9 | 5.6 |
| A9 | 39.24 | 9.1 | 7.7 | 4 |
| A10 | 48.85 | 14.8 | 16.7 | 11.2 |
>TRINITY_DN48202_c1_g4_i20 from sample A7 / Example spliced isoformATAAAATTTGACGTGGAGAACCATAAAATCTAACAAAAAAGCATGGCAGATTTCGCCGTTTTGAGTTTATTCTTCTCAACGTAAAATTCGAATGGAATCGAAAGGCGCGGCTTAACAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCA
TTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATA
CATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACATTGACATATAATACCGCTCTATAAACAGTGTGACGGGAGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGACCTGG
CTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGTATGAACCATGATGCAGATAAGCTGTTCAATCGAGAATACCTCTTGGCTCTTACTCTGCCATTTACTATGGTTTTTGGTGCTTTCTGTTTTGTTGTCTTTCTGAATGATTTGGTTTTATTTTACAGGGAATGAATGTTGGAAGGTATATATCTCCTT
CTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAGGTATATATCTCCGCTCTATAAACAGGTAGTTTTTTCTTTGGGCTTCCATTATCTTTGTACTGTACGCGCTTCGATAACTTTTTAAATATAAGTTTTTCGTGTTTGGTTGCTATCACTATTATTGCACGAATCTCTTCATTTTACTTTCTATTTGCGC
ACTCTCTCACGTACTCTAATTTAGATCTTCACACTGAAGAGTGCTCTGTGTTAAGAAATAGTAATTACTTTGAGTTAACTTAGCTTTTATATTCAGTTCCTATTTAGATGTTTAGTTAATAAATGCAACAGCATGCTTTGCATGCATGCAAAAGCTATGTTAGAGCTGTTATGGTTTTCCATAAGTGTTTAAATACACTT
TAGATTATTGTTTGTATTGCATCAATCCC
>TRINITY_DN48202_c1_g4_i2 from sample A7 / Example unspliced isoform:ATAAAATTTGACGTGGAGAACCATAAAATCTAACAAAAAAGCATGGCAGATTTCGCCGTTTTGAGTTTATTCTTCTCAACGTAAAATTCGAATGGAATCGAAAGGCGCGGCTTAACAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCA
TTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATA
CATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTTGTTTCCGTACCTCCTATACTTTTTATGAAGATTTTGTTTGATTCATTAAATTTCGTTTGATGTTTTGATGGGATGGATAGGATTTTAAGGTTTATGAAAAATTTCGTTCAATGATGAAATGGATGAACTGCGGCTGGCTGGTC
TTATGGCGGTGTAAGCTTCTGCGGCTGTCAATGGCTTTTGCATCGCCAGATACCATTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGTTTCGCTGTGAATGTTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGG
AGGTACATTGACATATAATACCGCTCTATAAACAGgtatttttttctttgcgcttccattatctttgaacagtgatgtgcctgaagctggatctttagttttgaaaggaaaattgtttctgtgaacccatagttatggctgtctttggctctatgaatgagatgggtttctgtttcgttctttgttattagTGTGACGGG
AGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGTATGAACCATGATGCAGATAAGCTGTTCAATCGAGAATACCTCTTGGCTCTTACTCTGCCATTTACTATGGTTTTTGGTGCTTTCTGTTTTGTTGTCTTTC
TGAATGATTTGGTTTTATTTTACAGGGAATGAATGTTGGAAGGTATATATCTCCTTCTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAGGTATATATCTCCGCTCTATAAACAGGTAGTTTTTTCTTTGGGCTTCCATTATCTTTGTACTGTACGCGCTTCGATAACTTTTTAAATATAAGTTTTTCGTG
TTTGGTTGCTATCACTATTATTGCACGAATCTCTTCATTTTACTTTCTATTTGCGCACTCTCTCACGTACTCTAATTTAGATCTTCACACTGAAGAGTGCTCTGTGTTAAGAAATAGTAATTACTTTGAGTTAACTTAGCTTTTATATTCAGTTCCTATTTAGATGTTTAGTTAATAAATGCAACAGCATGCTTTGCATG
CATGCAAAAGCTATGTTAGAGCTGTTATGGTTTTCCATAAGTGTTTAAATACACTTTAGATTATTGTTTGTATTGCATCAATCCC
Intron 2 GTTTGTTTCC ... GGATGGATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 74.47 | 6 | 22 | 13 |
| A2 | 56.36 | 12 | 15 | 16 |
| A3 | 58.97 | 8 | 9 | 14 |
| A4 | 72.97 | 5 | 19 | 8 |
| A5 | 75 | 2 | 7 | 5 |
| A6 | 71.43 | 1 | 2 | 3 |
| A7 | 55.56 | 14 | 22 | 13 |
| A8 | 63.33 | 11 | 17 | 21 |
| A9 | 57.38 | 13 | 24 | 11 |
| A10 | 42.53 | 25 | 24 | 13 |
>TRINITY_DN48376_c0_g1_i4 from sample A10 / Example spliced isoformTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATAC
ATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGATTTTAAGGTTTATGAAAAATTTCGTTCAATGATGAAATGGATGAACTGCGGCTGGCTGGTCTTATGGCGGTGTAAGCTTCTGCGGCTGTCAATGGCTTTTGCATCGCCAGATACCATTCATTTTCGTGCGTTATTTGTTTTTTTGG
GGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGTTTCGCTGTGAATGTTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACATTGACATATAATACCGCTCTATAAACAGGTATTTTTTTCTTTGCTCTTCCATTATCTTTGAACAGTGATGTGCCTGAA
GCTGGATCTTTAGTTTTGAAAGGAAAATTGTTTCTGTGAACCCATAGTTATGGCTGTCTTTGGCTCTATGAATGAGATGGGTTTCTGTTTCGTTCTTTGTTATTAGTGTGACGGGAGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGC
ATAACCCATGAAAGTATGAACCATGATGCAGATAAGCTGTTCAATCGAGAATACCTCTTGGCTCTTACTCTGCCATTTACTATGGTTTTTGGTGCTTTCTGTTTTGTTGTCTTTCTGAATGATTTGGTTTTATTTTACAGGGAATGAATGTTGGAAGGTATATATCTCCTTCTTTAATCTTTGTACTGTGTGTTTTTCTC
CGCTCTATAAACAGGTATATATCTCCGCTCTATAAACAGGTAGTTTTTTCTTTGGGCTTCCATTATCTTTGTACTGTACGCGCTTCGATAACTTTTTAAATATAAGTTTTTCGTGTTTGGTTGCTATCACTATTATTGCACGAATCTCTTCATTTTACTTTCTATTTGCGCACTCTCTCACGTACTCTAATTTAGATCTT
CACATTGAAGAGTGCTCTGCATGTTTGCTATAATGTCTCTCTGTGCTCTGCTTAGACTCAGATCACCTGCCGAACACATTATTATGCACAAGTATGGCGCC
>TRINITY_DN48376_c0_g1_i9 from sample A10 / Example unspliced isoform:TCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATAC
ATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGgtttgtttccgtacctcctatactttttatgaagattttgtttgattcattaaatttcgtttgatgttttgatgggatggatagGATTTTAAGGTTTATGAAAAATTTCGTTCAATGATGAAATGGATGAACTGCGGCTGGCTGGTCT
TATGGCGGTGTAAGCTTCTGCGGCTGTCAATGGCTTTTGCATCGCCAGATACCATTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGTTTCGCTGTGAATGTTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGA
GGTACATTGACATATAATACCGCTCTATAAACAGGTATTTTTTTCTTTGCTCTTCCATTATCTTTGAACAGTGATGTGCCTGAAGCTGGATCTTTAGTTTTGAAAGGAAAATTGTTTCTGTGAACCCATAGTTATGGCTGTCTTTGGCTCTATGAATGAGATGGGTTTCTGTTTCGTTCTTTGTTATTAGTGTGACGGGA
GAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGTATGAACCATGATGCAGATAAGCTGTTCAATCGAGAATACCTCTTGGCTCTTACTCTGCCATTTACTATGGTTTTTGGTGCTTTCTGTTTTGTTGTCTTTCT
GAATGATTTGGTTTTATTTTACAGGGAATGAATGTTGGAAGGTATATATCTCCTTCTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAGGTATATATCTCCGCTCTATAAACAGGTAGTTTTTTCTTTGGGCTTCCATTATCTTTGTACTGTACGCGCTTCGATAACTTTTTAAATATAAGTTTTTCGTGT
TTGGTTGCTATCACTATTATTGCACGAATCTCTTCATTTTACTTTCTATTTGCGCACTCTCTCACGTACTCTAATTTAGATCTTCACATTGAAGAGTGCTCTGCATGTTTGCTATAATGTCTCTCTGTGCTCTGCTTAGACTCAGATCACCTGCCGAACACATTATTATGCACAAGTATGGCGCC
Intron 3 GTGCAGGGGC ... TGTGCAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 75.47 | 2.8 | 7 | 10 |
| A2 | 42.4 | 9.9 | 9 | 4 |
| A3 | 17.05 | 18.7 | 4.8 | 3 |
| A4 | 47.04 | 9.5 | 7.2 | 9 |
| A5 | 31.42 | 12.3 | 5.4 | 5 |
| A6 | 36.19 | 4.2 | 2 | 2 |
| A7 | 31.6 | 23.8 | 10.8 | 11 |
| A8 | 62.68 | 4.5 | 9.2 | 5 |
| A9 | 59.08 | 4.7 | 9 | 3 |
| A10 | 59.81 | 5.7 | 5.8 | 11 |
>TRINITY_DN133350_c3_g2_i3 from sample A1 / Example spliced isoformTTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATACATTTGCA
GGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTTGTTTCCGTACCTCCTATACTTTTTATGAAGATTTTGTTTGATTCATTAAATTTCGTTTGATGTTTTGATGGGATGGATAGGATTTTAAGGTTTATGAAAAATTTCGTTCAATGATGAAATGGATGAACTGCGGCTGGCTGGTCTTATGGCG
GTGTAAGCTTCTGCGGCTGTCAATGGCTTTTGCATCGCCAGATACCATTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGTTTCGCTGTGAATGTTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACAT
TGACATATAATACCGCTCTATAAACAGTGTGACGGGAGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGTATGAACCATGATGCAGAGGGAATGAATGTTGGAAGGGTGGGCACGATGAGTTTGTGGAATCCCA
GGTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGGTATTCTTTTCATTACATGCTTTTAATTATATGCTTTTAATGATTTGAAACATGTATATGCGTTTAATTATTTAAAGAAATTTTTTAATTGTATCTTTATGTTTTGTTACGTAGCCTAGTTATGGTTAGGTTTTACTTTTACCTTCTAGTAC
>TRINITY_DN133350_c3_g2_i9 from sample A1 / Example unspliced isoform:TTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATACATTTGCA
GGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTTGTTTCCGTACCTCCTATACTTTTTATGAAGATTTTGTTTGATTCATTAAATTTCGTTTGATGTTTTGATGGGATGGATAGGATTTTAAGGTTTATGAAAAATTTCGTTCAATGATGAAATGGATGAACTGCGGCTGGCTGGTCTTATGGCG
GTGTAAGCTTCTGCGGCTGTCAATGGCTTTTGCATCGCCAGATACCATTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGTTTCGCTGTGAATGTTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACAT
TGACATATAATACCGCTCTATAAACAGTGTGACGGGAGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGgtgcaggggccacccaaatcaaacacgtttcaatgatcagatttggttgtttccgtacctagcccttaattaggtttacatttggtgtatggaatggggttctgatgttcatta
ataatttcctcacggctggtgtgtgcagcagACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGTATGAACCATGATGCAGATAAGCTGTTCAATCGAGAATACCTCTTGGCTCTTACTCTGCCATTTACTATGGTTTTTGGTGCTTTCTGTTTTGTTGTCTTTCTGAATGATTTGGTTTTATT
TTACAGGGAATGAATGTTGGAAGGTATATATCTCCTTCTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAGGTATATATCTCCGCTCTATAAACAGGTAGTTTTTTCTTTGCGCTTCCATTATCTTTGTACTGTACGCGCTTCGATAACTTTTTAAATATAAGTTTTTCGTGTTTGGTTGCTATCACTATT
ATTGCACGAATCTCTTCATTTTACTTTCTATTTGCGCACTCTCTCACGTACTCTAATTTAGATCTTCACACTGAAGAGTGCTCTGTGTTAAGAAATAGTAATTACTTTGAGTTAACTTAGCTTTTATATTCAGTTCCTATTTAGATGTTTAGTTAATAAATGCAACAGCATGCTTTGCATGCATGCAAAAGCTAGGTTAA
AGCTTTTAGGGTTTTCCATAAGTGTTTAAATACACATTAGATTATTGTTTGTATTGCATCAATCTCCGTTTATGAATAAAGATTGAAGAGCCATAGCTCATTCAGCATTATCTTTGTTTTATTTCTGCCTCCATCCTTCAGTTTGGTATCAGAGCTTAGGAAAAGATCAAATTGGTAGCATCAATTTCAGGAGAAGCCAA
AGCCCTAGCTTTGAAGAATTTTCACAGAAATTGTTTTTAGAGAAATTATTAAAACAAATTTTTTTTTGACACTACTCCCTACACTCCAAAGTGAGGTAGTCAGTGAAGACCCACG
Intron 4 GTATGAACCA ... TATTTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 73.25 | 6 | 9.4 | 16.8 |
| A2 | 53 | 9.5 | 6.4 | 11.8 |
| A3 | 78.11 | 3.5 | 12.8 | 10 |
| A4 | 72.87 | 6 | 14 | 14.2 |
| A5 | 72.72 | 3 | 4.8 | 5.6 |
| A6 | 42.29 | 5 | 1.8 | 5 |
| A7 | 42.87 | 24.5 | 16.4 | 18.6 |
| A8 | 57.64 | 8 | 10.2 | 11.6 |
| A9 | 36.01 | 8.5 | 1.2 | 8.4 |
| A10 | 72.64 | 10.5 | 26.6 | 25 |
>TRINITY_DN48202_c1_g4_i10 from sample A7 / Example spliced isoformATAAAATTTGACGTGGAGAACCATAAAATCTAACAAAAAAGCATGGCAGATTTCGCCGTTTTGAGTTTATTCTTCTCAACGTAAAATTCGAATGGAATCGAAAGGCGCGGCTTAACAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCA
TTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATA
CATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTTGTTTCCGTACCTCCTATACTTTTTATGAAGATTTTGTTTGATTCATTAAATTTCGTTTGATGTTTTGATGGGATGGATAGGATTTTAAGGTTTATGAAAAATTTCGTTCAATGATGAAATGGATGAACTGCGGCTGGCTGGTC
TTATGGCGGTGTAAGCTTCTGCGGCTGTCAATGGCTTTTGCATCGCCAGATACCATTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGTTTCGCTGTGAATGTTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGG
AGGTACATTGACATATAATACCGCTCTATAAACAGTGTGACGGGAGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGGAATGAATGTTGGAAGGTATATATCTCCTTCTTTAATCTTTGTACTGTGTGTTTTTC
TCCGCTCTATAAACAGGTATATATCTCCGCTCTATAAACAGGTAGTTTTTTCTTTGGGCTTCCATTATCTTTGTACTGTACGCGCTTCGATAACTTTTTAAATATAAGTTTTTCGTGTTTGGTTGCTATCACTATTATTGCACGAATCTCTTCATTTTACTTTCTATTTGCGCACTCTCTCACGTACTCTAATTTAGATC
TTCACACTGAAGAGTGCTCTGTGTTAAGAAATAGTAATTACTTTGAGTTAACTTAGCTTTTATATTCAGTTCCTATTTAGATGTTTAGTTAATAAATGCAACAGCATGCTTTGCATGCATGCAAAAGCTATGTTAGAGCTGTTATGGTTTTCCATAAGTGTTTAAATACACTTTAGATTATTGTTTGTATTGCATCAATC
CC
>TRINITY_DN48202_c1_g4_i13 from sample A7 / Example unspliced isoform:ATAAAATTTGACGTGGAGAACCATAAAATCTAACAAAAAAGCATGGCAGATTTCGCCGTTTTGAGTTTATTCTTCTCAACGTAAAATTCGAATGGAATCGAAAGGCGCGGCTTAACAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCA
TTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATA
CATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTTGTTTCCGTACCTCCTATACTTTTTATGAAGATTTTGTTTGATTCATTAAATTTCGTTTGATGTTTTGATGGGATGGATAGGATTTTAAGGTTTATGAAAAATTTCGTTCAATGATGAAATGGATGAACTGCGGCTGGCTGGTC
TTATGGCGGTGTAAGCTTCTGCGGCTGTCAATGGCTTTTGCATCGCCAGATACCATTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGTTTCGCTGTGAATGTTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGG
AGGTACATTGACATATAATACCGCTCTATAAACAGGTATTTTTTTCTTTGCGCTTCCATTATCTTTGAACAGTGATGTGCCTGAAGCTGGATCTTTAGTTTTGAAAGGAAAATTGTTTCTGTGAACCCATAGTTATGGCTGTCTTTGGCTCTATGAATGAGATGGGTTTCTGTTTCGTTCTTTGTTATTAGTGTGACGGG
AGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGGTGCAGGGGCCACCCAAATCAAACACGTTTCAATGATCAGATTTGGTTGTTTCCGTACCTAGCCCTTAATTAGGTTTACATTTGGTGTATGGAATGGGGTTCTGATGTTCATTAATAATTTCCTCACGGCTGGTGTGTGCAGCAGACCTG
GCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAgtatgaaccatgatgcagataagctgttcaatcgagaatacctcttggctcttactctgccatttactatggtttttggtgctttctgttttgttgtctttctgaatgatttggttttattttacagGGAATGAATGTTGGAAGGTATATATCTCCT
TCTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAGGTATATATCTCCGCTCTATAAACAGGTAGTTTTTTCTTTGGGCTTCCATTATCTTTGTACTGTACGCGCTTCGATAACTTTTTAAATATAAGTTTTTCGTGTTTGGTTGCTATCACTATTATTGCACGAATCTCTTCATTTTACTTTCTATTTGCG
CACTCTCTCACGTACTCTAATTTAGATCTTCACACTGAAGAGTGCTCTGTGTTAAGAAATAGTAATTACTTTGAGTTAACTTAGCTTTTATATTCAGTTCCTATTTAGATGTTTAGTTAATAAATGCAACAGCATGCTTTGCATGCATGCAAAAGCTATGTTAGAGCTGTTATGGTTTTCCATAAGTGTTTAAATACACT
TTAGATTATTGTTTGTATTGCATCAATCCC
Intron 5 GTACGTGTAC ... CTTATGCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 0 | 3 |
| A2 | 100 | 0 | 1 | 1 |
| A3 | 100 | 0 | 1 | 0 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 20 | 8 | 2 | 2 |
| A7 | 44.58 | 23 | 13 | 24 |
| A8 | 38.03 | 22 | 12 | 15 |
| A9 | 35.21 | 23 | 10 | 15 |
| A10 | 45.88 | 23 | 10 | 29 |
>TRINITY_DN48376_c0_g1_i13 from sample A10 / Example spliced isoformTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATAC
ATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTTGTTTCCGTACCTCCTATACTTTTTATGAAGATTTTGTTTGATTCATTAAATTTCGTTTGATGTTTTGATGGGATGATGAAATGATGACCTGCGGCTGGCTGGTCTTATGGCGGTGTAAGCTTCTGCGGCTGTCAGTGGCTTTTG
CATCGCCAGATATCACTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGGTTCGCTGTGAATGGTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACATTACCATATAATACCGCTCTATAAACAGGTATT
TTTTTCTTTGCGCTTCCGTTATCTTTGAACGGTGATGTGCCTGAAGTTGGATCTTTAGCTTTGAAAGGAAATTTGTTTCTGTGAACCCATAGTTATGGCTGTTTTGAAAGGAAAGGAGATGGGTTTCTGTTTCGTTCTTTGTTATTAGTGTGATGGGAGAGGAAGAGAGCTGGAAGAGACCAACATTCTACATATTACAT
TTGCAGGTGCAGGGGCCACCCAAATCAAACACGTTTCAAAGATCAGATTTGGTTGTTTCCGTACCTGGTCCTTAATTAGGTTTACATTTGGTGTATGGCATGGGGTTCTGATGTTCATTAATAATTTCCTCACGGCTGGTGTGTGCAGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCCACCCAAATCAAAC
ACGTTTCAAAGATCAGATTTGGTTGTTTCCGTACCTAGCCCTTAATTAGGTTTACATTTGGTGTATGGCATGGGGTTCTGATGTTCATTAATAATTTCCTCACGGCTGGTGTGTGCAGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGTATGAACCATGATGCAGATAAGCTGTTCAA
TCGAGAATACCTCTTGGCTCTTACTCTGCCATTTACTATGGTTTTTGGTGCTTTCTGTTTTGTTGTCTTTCTGAATGATTTGGTTTTATTTTACAGGGAATGAATGTTGGAAGGTATATATCTCCTTCTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAGGGTGGGCACGATGAGTTTGTGGAATCCCAG
GTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGTTATGGTTAGGTTTTACTTTTACCTTCTAGTACGGCCAATGTTTAGTATTCCACCCACCGGTGACCCTCTTCCTTCCCCCCAGCATCTAGTGATGCAATGGTACTTGAAGAGCACCCAATTGATGTTGTTGGTGACCCACCTATCCCCCCCCGCAGGCATC
TAGTGATGCAGTGGTGCTTGAAGAGCACCGAATTGACGTTGTTGGTGACCCACCTATCCTCCCCCCCAGGCATCTAGTGATGCAATGGTGCCTGAAGAGCACCCAATCGAGGTTGTTGGTGACCCACCTCTACCCCCCCTAGGCATCTACTGAGCTAGTGGTGCCTGAAGAGCACCCAATTGGGGCCACTGATGACCCTG
CACGCCCCCCCACCCAAGTACATGCAATTTTAGTGCCGAGGACTTACACACACATCTCTCCGATATTGAGAATGCGTCCTCCTGCGGATTGTTGGGGAATGCCATCGAGAAGCCAAAAAAGAAAGATAGACTTCTCATTAGCCACTCACATTGGCAGTAAAAAGGGGAATAAATAGAAATCATGTATGGGGGGGTACATA
TAGAATCCATGTTTAGGGGAAATACATACATGTACCTTTTTGTTTGTATGTACACACAGATGTAGAGTATGATCCACAATTTTGTATTATGGCCATGGCATGCCATTTTTGAAAACATTATACATGTACATCTATAATATAAAGCAACGTTCAGATTTACC
>TRINITY_DN48376_c0_g1_i11 from sample A10 / Example unspliced isoform:TAAATACATCTTAAACTCAATACAATATGTTTTATGCAGGGTGGGCACGATGAGTTTGTGGAATCCCAGGTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGGTATTCTTTTCATTACATGCTTTTAATTATATGCTTTTAATGATTTGAAACATGTATATGCGTTTAATTATTTAAAGAAATTTTTTAATTGT
ATCTTTATGTTTTGTTACGTAGCCTAGTTATGGTTAGGTTTTACTTTTACCTTCTAGTACGGCCAATGTTTAGTATTCCACCCACCGGTGACCCTCTTCCTTCCCCCCAGgtacgtgtacatgtcttgctttctttgaaaaaaccattttccatccatgtagtatatatatgtagtcttgttagatctttgtatttgctg
acattgacatatatatgttaccttatgcaagCATCTAGTGATGCAATGGTACTTGAAGAGCACCCAATTGATGTTGTTGGTGACCCACCTATCCCCCCCCGCAGGCATCTAGTGATGCAGTGGTGCTTGAAGAGCACCGAATTGACGTTGTTGGTGACCCACCTATCCTCCCCCCCAGGCATCTAGTGATGCAATGGTGC
CTGAAGAGCACCCAATCGAGGTTGTTGGTGACCCACCTCTACCCCCCCTAGGCATCTACTGAGCTAGTGGTGCCTGAAGAGCACCCAATTGGGGCCACTGATGACCCTGCACGCCCCCCCACCCAAGTACATGCAATTTTAGTGCCGAGGACTTACACACACATCTCTCCGATATTGAGAATGCGTCCTCCTGCGGATTG
TTGGGGAATGCCATCGAGAAGCCAAAAAAGAAAGATAGACTTCTCATTAGCCACTCACATTGGCAGTAAAAAGGGGAATAAATAGAAATCATGTATGGGGGGGTACATATAGAATCCATGTTTAGGGGAAATACATACATGTACCTTTTTGTTTGTATGTACACACAGATGTAGAGTATGATCCACAATTTTGTATTATG
GCCATGGCATGCCATTTTTGAAAACATTATACATGTACATCTATAATATAAAGCAACGTTCAGATTTACC
Intron 6 GTTTGTTTCC ... ATGTTGCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 75.52 | 6.4 | 22 | 16.2 |
| A2 | 68.62 | 9.7 | 15 | 24.8 |
| A3 | 61.43 | 12.1 | 9 | 26.3 |
| A4 | 71.67 | 7.1 | 19 | 15.4 |
| A5 | 49.58 | 4.8 | 7 | 1.6 |
| A6 | 61.3 | 3.3 | 2 | 7.4 |
| A7 | 54.71 | 17.1 | 22 | 18.3 |
| A8 | 75.61 | 6 | 17 | 19.2 |
| A9 | 62.01 | 10.1 | 24 | 8.6 |
| A10 | 54.72 | 19.7 | 24 | 22.8 |
>TRINITY_DN133350_c3_g2_i14 from sample A1 / Example spliced isoformCAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCATTCTTTGATTTGTGTGAATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTAC
TGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATACATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGAAACCTGACGGCATAGCCGA
>TRINITY_DN133350_c3_g2_i10 from sample A1 / Example unspliced isoform:TTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATACATTTGCA
GGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGgtttgtttccgtacctcctatactttttatgaagattttgtttgattcattaaatttcgtttgatgttttgatgggatggataggattttaaggtttatgaaaaatttcgttcaatgatgaaatggatgaactgcggctggctggtcttatggcg
gtgtaagcttctgcggctgtcaatggcttttgcatcgccagataccattcattttcgtgcgttatttgtttttttggggattgatgggttttattgtatttactactggggaatgaatgtttagtttcgctgtgaatgttgcaagAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACAT
TGACATATAATACCGCTCTATAAACAGGTATTTTTTTCTTTGCTCTTCCATTATCTTTGAACAGTGATGTGCCTGAAGCTGGATCTTTAGTTTTGAAAGGAAAATTGTTTCTGTGAACCCATAGTTATGGCTGTCTTTGGCTCTATGAATGAGATGGGTTTCTGTTTCGTTCTTTGTTATTAGTGTAACG
Intron 7 GTATTCTTTT ... TGTTACGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 5 | 2 |
| A2 | 100 | 0 | 2 | 2 |
| A3 | 100 | 0 | 4 | 3 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 100 | 0 | 2 | 0 |
| A6 | 25 | 6 | 1 | 3 |
| A7 | 51.43 | 17 | 15 | 21 |
| A8 | 54.93 | 16 | 18 | 21 |
| A9 | 23.64 | 21 | 5 | 8 |
| A10 | 59.42 | 14 | 20 | 21 |
>TRINITY_DN48376_c0_g1_i7 from sample A10 / Example spliced isoformTAAATACATCTTAAACTCAATACAATATGTTTTATGCAGGGTGGGCACGATGAGTTTGTGGAATCCCAGGTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGCCTAGTTATGGTTAGGTTTTACTTTTACCTTCTAGTACGGCCAATGTTTAGTATTCCACCCACCGGTGACCCTCTTCCTTCCCCCCAGCATC
TAGTGATGCAATGGTACTTGAAGAGCACCCAATTGATGTTGTTGGTGACCCACCTATCCCCCCCCGCAGGCATCTAGTGATGCAGTGGTGCTTGAAGAGCACCGAATTGACGTTGTTGGTGACCCACCTATCCTCCCCCCCAGGCATCTAGTGATGCAATGGTGCCTGAAGAGCACCCAATCGAGGTTGTTGGTGACCCA
CCTCTACCCCCCCTAGGCATCTACTGAGCTAGTGGTGCCTGAAGAGCACCCAATTGGGGCCACTGATGACCCTGCACGCCCCCCCACCCAAGTACATGCAATTTTAGTGCCGAGGACTTACACACACATCTCTCCGATATTGAGAATGCGTCCTCCTGCGGATTGTTGGGGAATGCCATCGAGAAGCCAAAAAAGAAAGA
TAGACTTCTCATTAGCCACTCACATTGGCAGTAAAAAGGGGAATAAATAGAAATCATGTATGGGGGGGTACATATAGAATCCATGTTTAGGGGAAATACATACATGTACCTTTTTGTTTGTATGTACACACAGATGTAGAGTATGATCCACAATTTTGTATTATGGCCATGGCATGCCATTTTTGAAAACATTATACATG
TACATCTATAATATAAAGCAACGTTCAGATTTACC
>TRINITY_DN48376_c0_g1_i11 from sample A10 / Example unspliced isoform:TAAATACATCTTAAACTCAATACAATATGTTTTATGCAGGGTGGGCACGATGAGTTTGTGGAATCCCAGGTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGgtattcttttcattacatgcttttaattatatgcttttaatgatttgaaacatgtatatgcgtttaattatttaaagaaattttttaattgt
atctttatgttttgttacgtagCCTAGTTATGGTTAGGTTTTACTTTTACCTTCTAGTACGGCCAATGTTTAGTATTCCACCCACCGGTGACCCTCTTCCTTCCCCCCAGGTACGTGTACATGTCTTGCTTTCTTTGAAAAAACCATTTTCCATCCATGTAGTATATATATGTAGTCTTGTTAGATCTTTGTATTTGCTG
ACATTGACATATATATGTTACCTTATGCAAGCATCTAGTGATGCAATGGTACTTGAAGAGCACCCAATTGATGTTGTTGGTGACCCACCTATCCCCCCCCGCAGGCATCTAGTGATGCAGTGGTGCTTGAAGAGCACCGAATTGACGTTGTTGGTGACCCACCTATCCTCCCCCCCAGGCATCTAGTGATGCAATGGTGC
CTGAAGAGCACCCAATCGAGGTTGTTGGTGACCCACCTCTACCCCCCCTAGGCATCTACTGAGCTAGTGGTGCCTGAAGAGCACCCAATTGGGGCCACTGATGACCCTGCACGCCCCCCCACCCAAGTACATGCAATTTTAGTGCCGAGGACTTACACACACATCTCTCCGATATTGAGAATGCGTCCTCCTGCGGATTG
TTGGGGAATGCCATCGAGAAGCCAAAAAAGAAAGATAGACTTCTCATTAGCCACTCACATTGGCAGTAAAAAGGGGAATAAATAGAAATCATGTATGGGGGGGTACATATAGAATCCATGTTTAGGGGAAATACATACATGTACCTTTTTGTTTGTATGTACACACAGATGTAGAGTATGATCCACAATTTTGTATTATG
GCCATGGCATGCCATTTTTGAAAACATTATACATGTACATCTATAATATAAAGCAACGTTCAGATTTACC
Intron 8 GTTTGTTTCC ... CTATAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 84.62 | 4 | 22 | 0 |
| A2 | 78.95 | 4 | 15 | 0 |
| A3 | 69.23 | 4 | 9 | 0 |
| A4 | 86.36 | 3 | 19 | 0 |
| A5 | 87.5 | 1 | 7 | 0 |
| A6 | 100 | 0 | 2 | 0 |
| A7 | 61.11 | 14 | 22 | 7 |
| A8 | 89.47 | 2 | 17 | 5 |
| A9 | 75 | 8 | 24 | 7 |
| A10 | 64.86 | 13 | 24 | 2 |
>TRINITY_DN48202_c1_g4_i16 from sample A7 / Example spliced isoformATAAAATTTGACGTGGAGAACCATAAAATCTAACAAAAAAGCATGGCAGATTTCGCCGTTTTGAGTTTATTCTTCTCAACGTAAAATTCGAATGGAATCGAAAGGCGCGGCTTAACAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCA
TTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATA
CATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGGTGGGCACGATGAGTTTGTGGAATCCCAGGTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGCCTAGTTATGG
>TRINITY_DN48202_c1_g4_i7 from sample A7 / Example unspliced isoform:ATAAAATTTGACGTGGAGAACCATAAAATCTAACAAAAAAGCATGGCAGATTTCGCCGTTTTGAGTTTATTCTTCTCAACGTAAAATTCGAATGGAATCGAAAGGCGCGGCTTAACAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCA
TTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATA
CATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGgtttgtttccgtacctcctatactttttatgaagattttgtttgattcattaaatttcgtttgatgttttgatgggatggataggattttaaggtttatgaaaaatttcgttcaatgatgaaatggatgaactgcggctggctggtc
ttatggcggtgtaagcttctgcggctgtcaatggcttttgcatcgccagataccattcattttcgtgcgttatttgtttttttggggattgatgggttttattgtatttactactggggaatgaatgtttagtttcgctgtgaatgttgcaagaaacctgacggcatagccgcttttccgtaaaggcataggatgatagg
aggtacattgacatataataccgctctataaacagtgtgacgggagaggaagagagctggatgagaccaacattcatacatattacatttgcagcagacctggcttgttggtcggttagccgtggaagcagcataacccatgaaaggaatgaatgttggaaggtatatatctccttctttaatctttgtactgtgtgttt
ttctccgctctataaacagGGTGGGCACGATGAGTTTGTGGAATCCCAGGTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGCCTAGTTATGG
Intron 9 GTTTGTTTCC ... CTATAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 84.62 | 4 | 22 | 2 |
| A2 | 78.95 | 4 | 15 | 1 |
| A3 | 69.23 | 4 | 9 | 1 |
| A4 | 86.36 | 3 | 19 | 3 |
| A5 | 87.5 | 1 | 7 | 0 |
| A6 | 100 | 0 | 2 | 1 |
| A7 | 61.11 | 14 | 22 | 8 |
| A8 | 89.47 | 2 | 17 | 7 |
| A9 | 75 | 8 | 24 | 10 |
| A10 | 64.86 | 13 | 24 | 7 |
>TRINITY_DN48202_c1_g4_i16 from sample A7 / Example spliced isoformATAAAATTTGACGTGGAGAACCATAAAATCTAACAAAAAAGCATGGCAGATTTCGCCGTTTTGAGTTTATTCTTCTCAACGTAAAATTCGAATGGAATCGAAAGGCGCGGCTTAACAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCA
TTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATA
CATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGGTGGGCACGATGAGTTTGTGGAATCCCAGGTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGCCTAGTTATGG
>TRINITY_DN48202_c1_g4_i17 from sample A7 / Example unspliced isoform:ATAAAATTTGACGTGGAGAACCATAAAATCTAACAAAAAAGCATGGCAGATTTCGCCGTTTTGAGTTTATTCTTCTCAACGTAAAATTCGAATGGAATCGAAAGGCGCGGCTTAACAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCA
TTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATA
CATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGgtttgtttccgtacctcctatactttttatgaagattttgtttgattcattaaatttcgtttgatgttttgatgggatggataggattttaaggtttatgaaaaatttcgttcaatgatgaaatggatgaactgcggctggctggtc
ttatggcggtgtaagcttctgcggctgtcaatggcttttgcatcgccagataccattcattttcgtgcgttatttgtttttttggggattgatgggttttattgtatttactactggggaatgaatgtttagtttcgctgtgaatgttgcaagaaacctgacggcatagccgcttttccgtaaaggcataggatgatagg
aggtacattgacatataataccgctctataaacagtgtgacgggagaggaagagagctggatgagaccaacattcatacatattacatttgcagacctggcttgttggtcggttagccgtggaagcagcataacccatgaaagtatgaaccatgatgcagataagctgttcaatcgagaatacctcttggctcttactct
gccatttactatggtttttggtgctttctgttttgttgtctttctgaatgatttggttttattttacagggaatgaatgttggaaggtatatatctccttctttaatctttgtactgtgtgtttttctccgctctataaacagGGTGGGCACGATGAGTTTGTGGAATCCCAGGTCAATCCCTCCCATGTAGAGGAAGAT
TCCCAGACTCAGCCTAGTTATGG
Intron 10 ATAAGCTGTT ... TTTATTTTAC
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 80.36 | 3 | 9.6 | 15 |
| A2 | 100 | 0 | 4 | 14 |
| A3 | 58.09 | 7 | 8.9 | 11 |
| A4 | 85.36 | 2.4 | 13.4 | 14.9 |
| A5 | 100 | 0 | 4.7 | 5 |
| A6 | 100 | 0 | 0.3 | 6 |
| A7 | 57.1 | 13.6 | 13.9 | 21 |
| A8 | 74.97 | 4.3 | 10.3 | 14 |
| A9 | 65.15 | 3.3 | 1.7 | 9 |
| A10 | 90.9 | 3.1 | 24.3 | 38 |
>TRINITY_DN133350_c3_g2_i3 from sample A1 / Example spliced isoformTTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATACATTTGCA
GGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTTGTTTCCGTACCTCCTATACTTTTTATGAAGATTTTGTTTGATTCATTAAATTTCGTTTGATGTTTTGATGGGATGGATAGGATTTTAAGGTTTATGAAAAATTTCGTTCAATGATGAAATGGATGAACTGCGGCTGGCTGGTCTTATGGCG
GTGTAAGCTTCTGCGGCTGTCAATGGCTTTTGCATCGCCAGATACCATTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGTTTCGCTGTGAATGTTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACAT
TGACATATAATACCGCTCTATAAACAGTGTGACGGGAGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGTATGAACCATGATGCAGAGGGAATGAATGTTGGAAGGGTGGGCACGATGAGTTTGTGGAATCCCA
GGTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGGTATTCTTTTCATTACATGCTTTTAATTATATGCTTTTAATGATTTGAAACATGTATATGCGTTTAATTATTTAAAGAAATTTTTTAATTGTATCTTTATGTTTTGTTACGTAGCCTAGTTATGGTTAGGTTTTACTTTTACCTTCTAGTAC
>TRINITY_DN133350_c3_g2_i9 from sample A1 / Example unspliced isoform:TTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATACATTTGCA
GGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTTGTTTCCGTACCTCCTATACTTTTTATGAAGATTTTGTTTGATTCATTAAATTTCGTTTGATGTTTTGATGGGATGGATAGGATTTTAAGGTTTATGAAAAATTTCGTTCAATGATGAAATGGATGAACTGCGGCTGGCTGGTCTTATGGCG
GTGTAAGCTTCTGCGGCTGTCAATGGCTTTTGCATCGCCAGATACCATTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGTTTCGCTGTGAATGTTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACAT
TGACATATAATACCGCTCTATAAACAGTGTGACGGGAGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGGTGCAGGGGCCACCCAAATCAAACACGTTTCAATGATCAGATTTGGTTGTTTCCGTACCTAGCCCTTAATTAGGTTTACATTTGGTGTATGGAATGGGGTTCTGATGTTCATTA
ATAATTTCCTCACGGCTGGTGTGTGCAGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGTATGAACCATGATGCAGataagctgttcaatcgagaatacctcttggctcttactctgccatttactatggtttttggtgctttctgttttgttgtctttctgaatgatttggttttatt
ttacAGGGAATGAATGTTGGAAGGTATATATCTCCTTCTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAGGTATATATCTCCGCTCTATAAACAGGTAGTTTTTTCTTTGCGCTTCCATTATCTTTGTACTGTACGCGCTTCGATAACTTTTTAAATATAAGTTTTTCGTGTTTGGTTGCTATCACTATT
ATTGCACGAATCTCTTCATTTTACTTTCTATTTGCGCACTCTCTCACGTACTCTAATTTAGATCTTCACACTGAAGAGTGCTCTGTGTTAAGAAATAGTAATTACTTTGAGTTAACTTAGCTTTTATATTCAGTTCCTATTTAGATGTTTAGTTAATAAATGCAACAGCATGCTTTGCATGCATGCAAAAGCTAGGTTAA
AGCTTTTAGGGTTTTCCATAAGTGTTTAAATACACATTAGATTATTGTTTGTATTGCATCAATCTCCGTTTATGAATAAAGATTGAAGAGCCATAGCTCATTCAGCATTATCTTTGTTTTATTTCTGCCTCCATCCTTCAGTTTGGTATCAGAGCTTAGGAAAAGATCAAATTGGTAGCATCAATTTCAGGAGAAGCCAA
AGCCCTAGCTTTGAAGAATTTTCACAGAAATTGTTTTTAGAGAAATTATTAAAACAAATTTTTTTTTGACACTACTCCCTACACTCCAAAGTGAGGTAGTCAGTGAAGACCCACG
Intron 11 GTGCAGGGGC ... GTGTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 71.8 | 3.7 | 7 | 10 |
| A2 | 35.81 | 11.7 | 9 | 4 |
| A3 | 14.25 | 16.3 | 2 | 3 |
| A4 | 45.64 | 9.7 | 6 | 9 |
| A5 | 24.31 | 14.3 | 3 | 6 |
| A6 | 28.57 | 5 | 2 | 2 |
| A7 | 30.14 | 24.7 | 10 | 11 |
| A8 | 58.63 | 5.7 | 10 | 5 |
| A9 | 43.27 | 8 | 9 | 3 |
| A10 | 64.9 | 5 | 5 | 13 |
>TRINITY_DN122745_c2_g2_i2 from sample A2 / Example spliced isoformAACCCATCCGTTACAGACTGCTGGATCATGTATCATGGATATGGATATAAAGCGTTTCATCATTTCACTGCTGCTTCACCATTTCTGCTCTCCCTGGTCATTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTC
TCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATACATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTTGTTTCCGTACCTCCTATACTTTTTATGAAGATTTTGTTTGATT
CATTAAATTTCGTTTGATGTTTTGATGGGATGGATAGGATTTTAAGGTTTATGAAAAATTTCGTTCAATGATGAAATGGATGAACTGCGGCTGGCTGGTCTTATGGCGGTGTAAGCTTCTGCGGCTGTCAATGGCTTTTGCATCGCCAGATACCATTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTT
ATTGTATTTACTACTGGGGAATGAATGTTTAGTTTCGCTGTGAATGTTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACATTGACATATAATACCGCTCTATAAACAGTGTGACGGGAGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACATTTGCAGCAGACC
TGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGTATGAACCATGATGCAGATAAGCTGTTCAATCGAGAATACCTCTTGGCTCTTACTCTGCCATTTACTATGGTTTTTGGTGCTTTCTGTTTTGTTGTCTTTCTGAATGATTTGGTTTTATTTTACAGGGAATGAATGTTGGAAGGTATATATCTC
CTTCTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAGGTATATATCTCCGCTCTATAAACAGGTAGTTTTTTCTTTGCGCTTCCATTATCTTTGTACTGTACGCGCTTCGATAACTTTTTAAATATAAGTTTTTCGTGTTTGGTTGCTATCACTATTATTGCACGAATCTCTTCATTTTACTTTCTATTTG
CGCACTCTCTCACGTACTCTAATTTAGATCTTCACACTGAAGAGTGCTCTGTGTTAAGAAATAGTAATTACTTTGAGTTAACTTAGCTTTTATATTCAGTTCCTATTTAGATGTTTAGTTAATAAATGCAACAGCATGCTTTGCATGCATGCAAAAGCTATGTTAGAGCTGTTATGGTTTTCCATAAGTGTTTAAATACA
CATTAGATTATTGTTTGTATTGCATCAATCTCCATTTATGAATAAAGATTGAAGAGCCATAGCTCATTCAGCATTATCTTTGTTTTATTTCTGCCTCCAACCTTCA
>TRINITY_DN122745_c2_g2_i3 from sample A2 / Example unspliced isoform:TCTTTGCGCTTCCATTATCTTTGAACAGTGATGTGCCTGAAGCTGGATCTTTAGTTTTGAAAGGAAATTTGTTTCTGTGAACCCATAGTTATGGCTGTCTTTGGCTGTATGAATGAGATGGGTTTCTGTTTCGTTCTTTGTTATTAGTGTGACGGGAGAGGAAGAGAGCTGGATGAGACCAACATTCATACATATTACAT
TTGCAGgtgcaggggccacccaaatcaaacacgtttcaatgatcagatttggttgtttccgtacctagcccttaattaggtttacatttggtgtatggaatggggttctgatgttcattaataatttcctcacggctggtgtgtgcagCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAG
TATGAACCATGATGCAGATAAGCTGTTCAATCGAGAATACCTCTTGGCTCTTACTCTGCCATTTACTATGGTTTTTGGTGCTTTCTGTTTTGTTGTCTTTCTGAATGATTTGGTTTTATTTTACAGGGAATGAATGTTGGAAGGTATATATCTCCTTCTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAG
GTATATATCTCCGCTCTATAAACAGGTAGTTTTTTCTTTGCGCTTCCATTATCTTTGTACTGTACGCGCTTCGATAACTTTTTAAATATAAGTTTTTCGTGTTTGGTTGCTATCACTATTATTGCACGAATCTCTTCATTTTACTTTCTATTTGCGCACTCTCTCACGTACTCTAATTTAGATCTTCACACTGAAGAGTG
CTCTGTGTTAAGAAATAGTAATTACTTTGAGTTAACTTAGCTTTTATATTCAGTTCCTATTTAGATGTTTAGTTAATAAATGCAACAGCATGCTTTGCATGCATGCAAAAGCTATGTTAGAGCTGTTATGGTTTTCCATAAGTGTTTAAATACACATTAGATTATTGTTTGTATTGCATCAATCTCCATTTATGAATAAA
GATTGAAGAGCCATAGCTCATTCAGCATTATCTTTGTTTTATTTCTGCCTCCAACCTTCA
Intron 12 GTATTCTTTT ... CGTAGCCTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 5 | 2 |
| A2 | 100 | 0 | 2 | 2 |
| A3 | 100 | 0 | 4 | 2 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 100 | 0 | 2 | 0 |
| A6 | 22.22 | 7 | 1 | 3 |
| A7 | 43.9 | 23 | 15 | 21 |
| A8 | 45.45 | 21 | 18 | 17 |
| A9 | 20 | 26 | 5 | 8 |
| A10 | 54.29 | 16 | 20 | 18 |
>TRINITY_DN48376_c0_g1_i13 from sample A10 / Example spliced isoformTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATAC
ATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTTGTTTCCGTACCTCCTATACTTTTTATGAAGATTTTGTTTGATTCATTAAATTTCGTTTGATGTTTTGATGGGATGATGAAATGATGACCTGCGGCTGGCTGGTCTTATGGCGGTGTAAGCTTCTGCGGCTGTCAGTGGCTTTTG
CATCGCCAGATATCACTCATTTTCGTGCGTTATTTGTTTTTTTGGGGATTGATGGGTTTTATTGTATTTACTACTGGGGAATGAATGTTTAGGTTCGCTGTGAATGGTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACATTACCATATAATACCGCTCTATAAACAGGTATT
TTTTTCTTTGCGCTTCCGTTATCTTTGAACGGTGATGTGCCTGAAGTTGGATCTTTAGCTTTGAAAGGAAATTTGTTTCTGTGAACCCATAGTTATGGCTGTTTTGAAAGGAAAGGAGATGGGTTTCTGTTTCGTTCTTTGTTATTAGTGTGATGGGAGAGGAAGAGAGCTGGAAGAGACCAACATTCTACATATTACAT
TTGCAGGTGCAGGGGCCACCCAAATCAAACACGTTTCAAAGATCAGATTTGGTTGTTTCCGTACCTGGTCCTTAATTAGGTTTACATTTGGTGTATGGCATGGGGTTCTGATGTTCATTAATAATTTCCTCACGGCTGGTGTGTGCAGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCCACCCAAATCAAAC
ACGTTTCAAAGATCAGATTTGGTTGTTTCCGTACCTAGCCCTTAATTAGGTTTACATTTGGTGTATGGCATGGGGTTCTGATGTTCATTAATAATTTCCTCACGGCTGGTGTGTGCAGCAGACCTGGCTTGTTGGTCGGTTAGCCGTGGAAGCAGCATAACCCATGAAAGTATGAACCATGATGCAGATAAGCTGTTCAA
TCGAGAATACCTCTTGGCTCTTACTCTGCCATTTACTATGGTTTTTGGTGCTTTCTGTTTTGTTGTCTTTCTGAATGATTTGGTTTTATTTTACAGGGAATGAATGTTGGAAGGTATATATCTCCTTCTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAGGGTGGGCACGATGAGTTTGTGGAATCCCAG
GTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGTTATGGTTAGGTTTTACTTTTACCTTCTAGTACGGCCAATGTTTAGTATTCCACCCACCGGTGACCCTCTTCCTTCCCCCCAGCATCTAGTGATGCAATGGTACTTGAAGAGCACCCAATTGATGTTGTTGGTGACCCACCTATCCCCCCCCGCAGGCATC
TAGTGATGCAGTGGTGCTTGAAGAGCACCGAATTGACGTTGTTGGTGACCCACCTATCCTCCCCCCCAGGCATCTAGTGATGCAATGGTGCCTGAAGAGCACCCAATCGAGGTTGTTGGTGACCCACCTCTACCCCCCCTAGGCATCTACTGAGCTAGTGGTGCCTGAAGAGCACCCAATTGGGGCCACTGATGACCCTG
CACGCCCCCCCACCCAAGTACATGCAATTTTAGTGCCGAGGACTTACACACACATCTCTCCGATATTGAGAATGCGTCCTCCTGCGGATTGTTGGGGAATGCCATCGAGAAGCCAAAAAAGAAAGATAGACTTCTCATTAGCCACTCACATTGGCAGTAAAAAGGGGAATAAATAGAAATCATGTATGGGGGGGTACATA
TAGAATCCATGTTTAGGGGAAATACATACATGTACCTTTTTGTTTGTATGTACACACAGATGTAGAGTATGATCCACAATTTTGTATTATGGCCATGGCATGCCATTTTTGAAAACATTATACATGTACATCTATAATATAAAGCAACGTTCAGATTTACC
>TRINITY_DN48376_c0_g1_i11 from sample A10 / Example unspliced isoform:TAAATACATCTTAAACTCAATACAATATGTTTTATGCAGGGTGGGCACGATGAGTTTGTGGAATCCCAGGTCAATCCCTCCCATGTAGAGGAAGATTCCCAGACTCAGgtattcttttcattacatgcttttaattatatgcttttaatgatttgaaacatgtatatgcgtttaattatttaaagaaattttttaattgt
atctttatgttttgttacgtagcctagTTATGGTTAGGTTTTACTTTTACCTTCTAGTACGGCCAATGTTTAGTATTCCACCCACCGGTGACCCTCTTCCTTCCCCCCAGGTACGTGTACATGTCTTGCTTTCTTTGAAAAAACCATTTTCCATCCATGTAGTATATATATGTAGTCTTGTTAGATCTTTGTATTTGCTG
ACATTGACATATATATGTTACCTTATGCAAGCATCTAGTGATGCAATGGTACTTGAAGAGCACCCAATTGATGTTGTTGGTGACCCACCTATCCCCCCCCGCAGGCATCTAGTGATGCAGTGGTGCTTGAAGAGCACCGAATTGACGTTGTTGGTGACCCACCTATCCTCCCCCCCAGGCATCTAGTGATGCAATGGTGC
CTGAAGAGCACCCAATCGAGGTTGTTGGTGACCCACCTCTACCCCCCCTAGGCATCTACTGAGCTAGTGGTGCCTGAAGAGCACCCAATTGGGGCCACTGATGACCCTGCACGCCCCCCCACCCAAGTACATGCAATTTTAGTGCCGAGGACTTACACACACATCTCTCCGATATTGAGAATGCGTCCTCCTGCGGATTG
TTGGGGAATGCCATCGAGAAGCCAAAAAAGAAAGATAGACTTCTCATTAGCCACTCACATTGGCAGTAAAAAGGGGAATAAATAGAAATCATGTATGGGGGGGTACATATAGAATCCATGTTTAGGGGAAATACATACATGTACCTTTTTGTTTGTATGTACACACAGATGTAGAGTATGATCCACAATTTTGTATTATG
GCCATGGCATGCCATTTTTGAAAACATTATACATGTACATCTATAATATAAAGCAACGTTCAGATTTACC
Intron 13 GTTTGTTTCC ... GAATGTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.04 | 9 | 22 | 13 |
| A2 | 68 | 8 | 15 | 19 |
| A3 | 54.72 | 12 | 9 | 20 |
| A4 | 70.83 | 7 | 19 | 15 |
| A5 | 47.37 | 5 | 7 | 2 |
| A6 | 47.83 | 6 | 2 | 9 |
| A7 | 48.72 | 20 | 22 | 16 |
| A8 | 66.04 | 9 | 17 | 18 |
| A9 | 50.72 | 17 | 24 | 11 |
| A10 | 44.68 | 26 | 24 | 18 |
>TRINITY_DN48202_c1_g4_i8 from sample A7 / Example spliced isoformATAAAATTTGACGTGGAGAACCATAAAATCTAACAAAAAAGCATGGCAGATTTCGCCGTTTTGAGTTTATTCTTCTCAACGTAAAATTCGAATGGAATCGAAAGGCGCGGCTTAACAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCA
TTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATA
CATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGGTTCGCTGTGAATGGTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGGAGGTACATTACCATATAATACCGCTCTATAAACAGGTATTTTTTTCTTTGCGCTTCCGTTATCTTTGAACGGTGATGTG
CCTGAAGTTGGATCTTTAGCTTTGAAAGGAAATTTGTTTCTGTGAACCCATAGTTATGGCTGTTTTGAAAGGAAAGGAGATGGGTTTCTGTTTCGTTCTTTGTTATTAGTGTGATGGGAGAGGAAGAGAGCTGGAAGAGACCAACATTCTACATATTACATTTGCAGGTGCAGGGGCCACCCAAATCAAACACGTTTCAA
TGATCAGATTTGGTTGTTTCCGTACCTAGCCCTTAATTAGGTTTACATTTGGTGTATGGAATGGGGTTCTGATGTTCATTAATAATTTCCTCACGGCTGGTGTGTGCAGCAGACCTGGCTTGTTAGCAGCATAACCCATGAAATTATGGGGTTCGAGATTACCTCTTGGCTCTTAATCTGCCATATAGTATGGTTTTTGG
TGCTTTCTGTTTTGTTGTCTTTCTGAATGATTTGGTTTTATTTTACAGGGAATGAATGTTGGAAGGTATATATCTCCTTCTTTAATCTTTGTACTGTGTGTTTTTCTCCGCTCTATAAACAGG
>TRINITY_DN48202_c1_g4_i3 from sample A7 / Example unspliced isoform:ATAAAATTTGACGTGGAGAACCATAAAATCTAACAAAAAAGCATGGCAGATTTCGCCGTTTTGAGTTTATTCTTCTCAACGTAAAATTCGAATGGAATCGAAAGGCGCGGCTTAACAAAAATCAACCCAACCGTTGCAGACTGCTGGATCATGGATCATGGATATAAAGCGTTTCATCATTTCACTGCTCTCCCTGGTCA
TTCTTTGATTTGTGTGAATATGAATGTGAATGCTTGTGTTTGTATGTATGTGGTGTGGTTTTGTGTCTCTGTTGTGTGGTGTGGTGTGTGGTTTTGTGTCTCTGTAGTGTGGTGTACTGCCATGGTGTGTGGGTTTCTGTGGTGGTCGGTCGTATGTTAGTCGTGTGTGATGGGGGAGAACGCACCAACATTCGTACATA
CATTTGCAGGTGCACGTTTCGATGATCAGACGGCGGGGCGAAAAATAAGATTGgtttgtttccgtacctcctatactttttatgaagattttgtttgattcattaaatttcgtttgatgttttgatgggatggataggattttaaggtttatgaaaaatttcgttcaatgatgaaatggatgaactgcggctggctggtc
ttatggcggtgtaagcttctgcggctgtcagtggcttttgcatcgccagatatcactcattttcgtgcgttatttgtttttttggggattgatgggttttattgtatttactactggggaatgaatgtttagGTTCGCTGTGAATGGTGCAAGAAACCTGACGGCATAGCCGCTTTTCCGTAAAGGCATAGGATGATAGG
AGGTACATTACCATATAATACCGCTCTATAAACAGGGAATGAATGTTGGTAGCGGTTAATAGTACAAAGAAGACTCAGATCACCTGCCGAACACATTATTATGCACAAGTATGGCGCCGTGATCACCTGCTTAGACTCAGATCGTGTGTGGACTTAGGGTTAAACTTACCAGGTAAAACATTGCTTTAAATTTTGGGATC
AGAAATTAAGTCGAAGAGCGCTCTGTGCTGTGTTTTCTTGTGTGATGTGTTTGATTGTGATGAGTTGTGTATTTTATTTTCTATCGTAATTGTGATTACTGAGAGAACAGACTAGACTTTGCAAGGAAAACATTTAAATCGTTGTAATATGAAGCTCTGCACAAGTAGTGCCAGTCACGACGATGATGCCGTGTTTCTCC
AGTAATGGCACTTTTAAACATT