NA ----> NA
Intron 1 GTGATTACTT ... TGGGATCTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 26 | 7 | 19 |
| A2 | 44 | 14 | 9 | 13 |
| A3 | 35.9 | 25 | 8 | 20 |
| A4 | 26.15 | 24 | 7 | 10 |
| A5 | 42.86 | 16 | 10 | 14 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 60 | 1 | 0 | 3 |
| A8 | -1 | 0 | 0 | 0 |
| A9 | 33.33 | 1 | 0 | 1 |
| A10 | 33.33 | 2 | 2 | 0 |
>TRINITY_DN93837_c0_g1_i2 from sample A5 / Example spliced isoformGAGGGAAGCAAAATGGGATTTTGCATTGAATGGAAGTAAGAAAATGGTGCTTCAACCTTTAACGAGGTCAATCACATTCCGGGTCCCAGGGGGGCAAAAGATAAAGAAAAAATAAACTGGGAGACTAAATATTCATATTCTGGTGTGGATTTTCCGAAAGTTAGGCTGCTGCAGGCATGCATTAATCAGATGTATGTCTG
GGAAGGAGAGAAGAAGGCTGACGGAGATTTTTTCAATTTATTTGTTGGCAGTTTGGGAAAAAGCCAAGGGAAGGGAAGGCAGGCAGGCTCTCTCTGGGTGTTCAAATATTAGAACAGTCACAATAATTAATTACGAGGAGGAGGAAATTGGGGAGTTTGGGCCTTTGAGATCTGTGTGGGATTGGGTTCCAAAATCGCTT
TTTTAGGAGAAAGGAAACCCTATTCACCCACTCCCTCAAAGGAACCCTTTTTAGGGATGAGTCTGAGAGGTATTTGAGGGATGAGTTTTAGATCAGAGGGTGATTCTGGATACCCTTCTTCTTCAACAACAACATCAGCGACAAGGCACAGATTTTGGGCTTCATCATACTCATCGCTTTCGCTGGGAGTCAAGGCTGCT
TATAGCATGATACTAGGATCTAGAATTGCCAAATTGCTAGTTGGAGAAACGAAGGAAGAGAACCTGAAATGCAGGCATCTGTGCAAACTGGAGGGCGGTCGGCAAGTCCTCTAAGCAGATCCAAGTCCACCCCTGAACACCCTCCTAGCCCGGCTTACTCGGTATCTGGTAGATCTAGAAAGCGAGACCGGAGCGACAGG
AGTGTAGATTCATCCTCCAAGAGAAAAACTCCGAAGGAACATCCAGAAATCAGCAGCCTTGTTGATAAGGATGGGGGTCTGGTCAACTGTGCCGGGGTCGAGCGATTGCATCTCCTTATGCAACAAGACCTTAACAAAAGTTCTAGGAAGCTGAAGGAGGTGGCATCCAGGAGGACCTCCCTTGCAGCTGTGATTGCTGC
TACAGCAAGGCATGATTGTCTGAACAGATTCGTGCAACTTGGTGGGTTGCCTCTGTTGAATGAGTGGCTGCAAGAAGCCCATAAAGGAAAACTTGGAGATGGTGGAAAGTCAAATGAATGCGGTAGAGCCATAGATGACCTAATTTTGACCTTGCTCCAGGCTCTGGAGAAGTTGCCTGTAGACTTTGATGCTTTGAAAT
CTAGCGATGCCGTGAAGTCGGTGAAGATTTTGAAATCTCACACGAACTCAAAAATTCATAGAAAGGCAAAGAAGTTGATAGAAGCTTGGAGGAAAAGAGTTGATGCAGAAATTAAGCAGTCAAAAGAAGCTGAGACTGCATCAAAACAGGATAATTGTCAGCCTTACAAACCGATAATGCCTAAGGATCCTCATAATACC
TTAAGAAATGGAGGCTCTGTAGATGCAAATGTGAGAAGCTCTGGGACATTTGGGAACACCGTAAAGACTACCATCACTAACAATAGTTCAAGCATGGGGGAAGTTGCAGTTTCTTTGAAAAAGAGTGGAGCCTCCGCGAAAGAAAGTCCTAACAGGATGCCGTCCAGTAACAGCCCACATGCAGAAATCGATAGTGCCTC
TTTCCCAGATGAGAGGAGCAGCAATTCCAACCAAGCATTGAACAATGGCCCTACACGGTCAACTGGACCCATGAAAAATACAGCTTCCAATGGGAAAGAAGACTCGAAGTTTTCGATGAATAATGCTGCAAACACGAAGACAGGGAATTCTAGGTCCAATATATCTAGCAAAGGAATCTCTGTAGTGGCGGGAGTCAATA
CTGGTTCCAAGGAAGTTGGATCGGGTAAGCCACTAGTCAGGAGTACGAGTGCAGGTATAGAGAAAAAAATAGGCATACCAGTTACCTCCGACAAAATATCAAATGAGTCTACAAAAGCTGAAGCTTGCAACAACCAGAGAATCATCCTGAGGCTTCCTAATACTGTAAGAAGTTCTGTGGGCAATTCGTTTGCTGATGTT
GTGGTACCCTCTAGCAGAGATTCATCTGCAAACATTACAGAGAGGAACCTGGATTCAAAAGAGATAAAGAGTAGGTTGCAGAATACATGCACAGACACTTCCAGCATGAAGGCCTCAGCTCTGAGAGACGATGAAATTGAGAAACATGTAGATCTGCCCAAACAAAGAACTGAAATGGAATGCCATTCATCAGAATCACA
TCTTTCTTTCAGTTCCACTGAATGTTGCACTCTTGACTTTAAGAAGAGTTATCACCACCAAGAGGGCCAGCCAATGAATAATAGGACTCGAGAGTCTTTGAAGCAGACTGGTGAGAAATTCGATGGATGTGGGACTGATGATGTTAACGCTGGCATCAGTCTCCTAGCATCCATAGCTGCAGATGAAAACATGAGGCTTG
AGGCAGATGCGGCTTTAGCAACATTCGAGAAAAAGAAGAATTCTAAAAGCGTTGAAATTAGACACCAGGATATGAAGTCAACTTGTTTGACAGATTCAGAAAATTCGCCAATGAGTGATATTACTGAAAACTCAGGGAGAATGGAAGTAGTTCCAGATCCGGATGTCAAGGATGTCCTGGAAAATTCTGAATATATCAGA
CCTAGCTCTGATGGAGTGCCGGATCTGGAAATGACTGCAGCACCAATTGATGCTGATATCGGGCAATCGGATGAAAGCATGAAAACAAGTGAAGGGCACTGCTCGGAACCAAATTCCTGCGAG
>TRINITY_DN93837_c0_g1_i4 from sample A5 / Example unspliced isoform:GAGGGAAGCAAAATGGGATTTTGCATTGAATGGAAGTAAGAAAATGGTGCTTCAACCTTTAACGAGGTCAATCACATTCCGGGTCCCAGGGGGGCAAAAGATAAAGAAAAAATAAACTGGGAGACTAAATATTCATATTCTGGTGTGGATTTTCCGAAAGTTAGGCTGCTGCAGGCATGCATTAATCAGATGTATGTCTG
GGAAGGAGAGAAGAAGGCTGACGGAGATTTTTTCAATTTATTTGTTGGCAGTTTGGGAAAAAGCCAAGGGAAGGGAAGGCAGGCAGGCTCTCTCTGGGTGTTCAAATATTAGAACAGTCACAATAATTAATTACGAGGAGGAGGAAATTGGGGAGTTTGGGCCTTTGAGATCTGTGTGGGATTGGGTTCCAAAATCGCTT
TTTTAGGAGAAAGGAAACCCTATTCACCCACTCCCTCAAAGGAACCCTTTTTAGGGATGAGTCTGAGAGGTATTTGAGGGATGAGTTTTAGATCAGAGGGTGATTCTGGATACCCTTCTTCTTCAACAACAACATCAGCGACAAGGCACAGATTTTGGGCTTCATCATACTCATCGCTTTCGCTGGGAGTCAAGGCTGCT
TATAGCATGgtgattacttcatgccttcaatgattccgagctgtaaatgatgatttggtggttctgctctggatttggtgtgtcttttgcaattgttttttgaaggtttcaggccttgggatctagATACTAGGATCTAGAATTGCCAAATTGCTAGTTGGAGAAACGAAGGAAGAGAACCTGAAATGCAGGCATCTGTG
CAAACTGGAGGGCGGTCGGCAAGTCCTCTAAGCAGATCCAAGTCCACCCCTGAACACCCTCCTAGCCCGGCTTACTCGGTATCTGGTAGATCTAGAAAGCGAGACCGGAGCGACAGGAGTGTAGATTCATCCTCCAAGAGAAAAACTCCGAAGGAACATCCAGAAATCAGCAGCCTTGTTGATAAGGATGGGGGTCTGGT
CAACTGTGCCGGGGTCGAGCGATTGCATCTCCTTATGCAACAAGACCTTAACAAAAGTTCTAGGAAGCTGAAGGAGGTGGCATCCAGGAGGACCTCCCTTGCAGCTGTGATTGCTGCTACAGCAAGGCATGATTGTCTGAACAGATTCGTGCAACTTGGTGGGTTGCCTCTGTTGAATGAGTGGCTGCAAGAAGCCCATA
AAGGAAAACTTGGAGATGGTGGAAAGTCAAATGAATGCGGTAGAGCCATAGATGACCTAATTTTGACCTTGCTCCAGGCTCTGGAGAAGTTGCCTGTAGACTTTGATGCTTTGAAATCTAGCGATGCCGTGAAGTCGGTGAAGATTTTGAAATCTCACACGAACTCAAAAATTCATAGAAAGGCAAAGAAGTTGATAGAA
GCTTGGAGGAAAAGAGTTGATGCAGAAATTAAGCAGTCAAAAGAAGCTGAGACTGCATCAAAACAGGATAATTGTCAGCCTTACAAACCGATAATGCCTAAGGATCCTCATAATACCTTAAGAAATGGAGGCTCTGTAGATGCAAATGTGAGAAGCTCTGGGACATTTGGGAACACCGTAAAGACTACCATCACTAACAA
TAGTTCAAGCATGGGGGAAGTTGCAGTTTCTTTGAAAAAGAGTGGAGCCTCCGCGAAAGAAAGTCCTAACAGGATGCCGTCCAGTAACAGCCCACATGCAGAAATCGATAGTGCCTCTTTCCCAGATGAGAGGAGCAGCAATTCCAACCAAGCATTGAACAATGGCCCTACACGGTCAACTGGACCCATGAAAAATACAG
CTTCCAATGGGAAAGAAGACTCGAAGTTTTCGATGAATAATGCTGCAAACACGAAGACAGGGAATTCTAGGTCCAATATATCTAGCAAAGGAATCTCTGTAGTGGCGGGAGTCAATACTGGTTCCAAGGAAGTTGGATCGGGTAAGCCACTAGTCAGGAGTACGAGTGCAGGTATAGAGAAAAAAATAGGCATACCAGTT
ACCTCCGACAAAATATCAAATGAGTCTACAAAAGCTGAAGCTTGCAACAACCAGAGAATCATCCTGAGGCTTCCTAATACTGTAAGAAGTTCTGTGGGCAATTCGTTTGCTGATGTTGTGGTACCCTCTAGCAGAGATTCATCTGCAAACATTACAGAGAGGAACCTGGATTCAAAAGAGATAAAGAGTAGGTTGCAGAA
TACATGCACAGACACTTCCAGCATGAAGGCCTCAGCTCTGAGAGACGATGAAATTGAGAAACATGTAGATCTGCCCAAACAAAGAACTGAAATGGAATGCCATTCATCAGAATCACATCTTTCTTTCAGTTCCACTGAATGTTGCACTCTTGACTTTAAGAAGAGTTATCACCACCAAGAGGGCCAGCCAATGAATAATA
GGACTCGAGAGTCTTTGAAGCAGACTGGTGAGAAATTCGATGGATGTGGGACTGATGATGTTAACGCTGGCATCAGTCTCCTAGCATCCATAGCTGCAGATGAAAACATGAGGCTTGAGGCAGATGCGGCTTTAGCAACATTCGAGAAAAAGAAGAATTCTAAAAGCGTTGAAATTAGACACCAGGATATGAAGTCAACT
TGTTTGACAGATTCAGAAAATTCGCCAATGAGTGATATTACTGAAAACTCAGGGAGAATGGAAGTAGTTCCAGATCCGGATGTCAAGGATGTCCTGGAAAATTCTGAATATATCAGACCTAGCTCTGATGGAGTGCCGGATCTGGAAATGACTGCAGCACCAATTGATGCTGATATCGGGCAATCGGATGAAAGCATGAA
AACAAGTGAAGGGCACTGCTCGGAACCAAATTCCTGCGAG