NA ----> NA
Intron 1 GTTTTATTTT ... TCGGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | -1 | 0.5 | 0 | 0.5 |
| A2 | 33.33 | 1 | 1 | 0 |
| A3 | 0 | 1.5 | 0 | 0 |
| A4 | -1 | 0.5 | 0 | 0 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 28.73 | 6.5 | 1 | 3.5 |
| A7 | 37.29 | 20.5 | 9.5 | 12 |
| A8 | 33.05 | 20 | 9 | 9.5 |
| A9 | 43.08 | 14 | 5 | 9.5 |
| A10 | 34.11 | 19.5 | 12.5 | 7.5 |
>TRINITY_DN46077_c1_g2_i7 from sample A7 / Example spliced isoformGAAAGAGCCAAAGGCTAAACAAAGCATTCACTTCAAAATTCAAGCCCTGCATTCAGATCTGGGAGATTTGGAGGTCGAGGAGATATTACAGTCTCCGTCGAGGAGATATTACGGCCTCCTGTGTTCGCAACTCCAGATGGTGCTCTCCAGATTTGGCAGAAGGAAGGGAAAGCAGTCCGTTTCTATGTTCGCTGATTCAG
ATGGTGCTCTTCAGATTTGGCAGATTGGATCTCTTGGGAGAAGGAAGAGAGAGCACTCGGTTTCTACCTGCCTGTTCTACCTCTAGAGCTCTGGGCAACTCCACAAACAGACATCAGAAGGAGGCTAGATTTGTAGGTACAGAGGATGAAGTGTTGGCCACGGCCATAACATTGGCGTTATCTCAGAGATATTTGTTCGT
GATCAAATACAACCCATTCTCAGTTTTGATATAGAATCAGGGAGAGGATTCGAAATGTTTATCTGGGTAGTTACTCTGGGTATCAGATATGTAAAATTTGGTATCTTTGGATGATCGCACAAAAAATCAAGCAGTTGACGGTAGATTCAAAAACAAATCAAGCAAATGACAGTAGACTCAAAAACAAATCAAGCAAAGGG
TATTAATATTGGCATGCTTCCCAAGCTGGCGTTGACAGGCCTATCAATAACGTATTCCACAGTTAAGTGATGTGGGAGCCCAGTTTTAAGGTAATCATGTGGTTCGTGTTTGAAATGGGCATTACAACAAGCTGAGCAGTGTCATGCACTGGCTCTCGATTTGCTTACTTGGAAAAATGTAGATGAAACAATAAAAACAT
TGTCATGTTTTGATCTATGCTGATGGATATTTCTTGATAAAGTCATGGTTCACTTGCTTCTGCACGACTGGTTCTTTTGTATTGCAATGTTGCAATCTTGTTTAAATAGATGTTTTAAAAGATTGTTGGAATAGCTATTGATTTGAGTTTTGAATGACAAAATCTATCTCAGGTCGAGTGTGAAGTTTTAAATCTTGTTT
TGTTAAAAGTTGTACAAAGG
>TRINITY_DN46077_c1_g2_i4 from sample A7 / Example unspliced isoform:GAAAGAGCCAAAGGCTAAACAAAGCATTCACTTCAAAATTCAAGCCCTGCATTCAGATCTGGGAGATTTGGAGGTCGAGGAGATATTACAGTCTCCGTCGAGGAGATATTACGGCCTCCTGTGTTCGCAACTCCAGATGGTGCTCTCCAGATTTGGCAGAAGGAAGGGAAAGCAGTCCGTTTCTATGTTCGCTGATTCAG
ATGGTGCTCTTCAGATTTGGCAGATTGGATCTCTTGGGAGAAGGAAGAGAGAGCACTCGGTTTCTACCTGCCTGTTCTACCTCTAGAGCTCTGGGCAACTCCACAAACAGACATCAGAAGGAGGCTAGATTTGTAGGTACAGAGgttttattttcttatgagaccgtggtcgttttgttgttctagggtttatttctttc
ggttgcagGATGAAGTGTTGGCCACGGCCATAACATTGGCGTTATCTCAGAGATATTTGTTCGTGATCAAATACAACCCATTCTCAGTTTTGATATAGAATCAGGGAGAGGATTCGAAATGTTTATCTGGGTAGTTACTCTGGGTATCAGATATGTAAAATTTGGT