sp|F4HY56|RLT1_ARATH ----> Homeobox-DDT domain protein RLT1
Intron 1 GTTTGATTTA ... TTGTCTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 15.78 | 62.9 | 7.3 | 12 |
| A2 | 26.29 | 75.9 | 6.3 | 29 |
| A3 | 17.57 | 84.4 | 8 | 19.7 |
| A4 | 24.02 | 63.2 | 9 | 21 |
| A5 | 20.35 | 30 | 4 | 8.7 |
| A6 | 26.85 | 4.9 | 0.3 | 2 |
| A7 | 30.84 | 47.8 | 1.7 | 24.3 |
| A8 | 14.44 | 10.9 | 2 | 2 |
| A9 | 19.83 | 36.4 | 4.7 | 10 |
| A10 | 27.05 | 35 | 2.3 | 14.7 |
>TRINITY_DN118372_c5_g1_i6 from sample A1 / Example spliced isoformTGGAAGCTCACTTTCCCGATGACCATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACA
TTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGA
CTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTT
GATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTT
CAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAAT
GGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTCGGTTGGCTTGACAAAA
ATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAG
CAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTC
TTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGT
CACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAG
TTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGA
TCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGGTATGAATGTTTTTGTGTTCCTT
TGCTTCTACCGTGATTGCATTCATTGCCGAATGAACTGCATGCCTGCTATTACGATAGCTCATCCATTTTTCCTTTCCAGTCAATATGGACTGAGATACTGACAGGGTTTTGTGTTGATTTATGTTGTCCAGTGATGGTAATCAGTCTCATACA
>TRINITY_DN118372_c5_g1_i3 from sample A1 / Example unspliced isoform:GCGGAGCTTTCACGTTTTCCAGgtttgatttatatatttccgaacaagcgggaaatttttaaagtcttaattgtctcatgtgtggttgctttgctgaagggattagatttgcggtgataggttttgtgttatggaggctggatttcatttcgcatttattattattatttttaagccggatacatttttacgttcttgaa
ttttttctgcactcgtttggttccctatatggaagcaacgagggcttcgactcgaatttggccttaaactgttttccatttgtcttcagGGTTTATTGGACAATATTCGATCTTTGAGCCGGTGAGTAGCTTAAATGTAACCGGGAATTGTCTTGTTGGACTAGCCTTAACGCCAAGCCCGCTATAAGTTCGTTATAAAA
GAATTTATTGAAGCCCTAGAATTGACAATTTTCAGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCTATTTGCATCAT
TCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAATCTTCAGGGATT
ATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAGTTAAAGAACTT
ATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTCGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCCATAGAGAGCGT
GGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACCGAGTGATGGAA
ATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTT
ACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTATGCTCTTCTCCG
GATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGACATTTTGCATG
AGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAGAAGTTGGAGAT
AATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTAAAGCAAAAATT
GGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGACAAATTCATTAG
GGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGCAAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTAATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCA
ATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCCACTCGTGTTCGCTCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATATGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGT
AGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGCTTACCATCAAAATTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTTTTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTA
TTGTTTACGTCCA
Intron 2 GTAAGCTTGA ... ATTTGACCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.16 | 142 | 36 | 27 |
| A2 | 23.12 | 128 | 47 | 30 |
| A3 | 18.71 | 176 | 49 | 32 |
| A4 | 17.79 | 67 | 12 | 17 |
| A5 | 16.67 | 65 | 13 | 13 |
| A6 | 17.26 | 187 | 45 | 33 |
| A7 | 19.02 | 626 | 161 | 133 |
| A8 | 16.32 | 733 | 160 | 126 |
| A9 | 17.94 | 519 | 123 | 104 |
| A10 | 15.98 | 510 | 113 | 81 |
>TRINITY_DN113897_c0_g1_i8 from sample A2 / Example spliced isoformCATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACATTTTGCCGGTGATCGATCGGCCG
GCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGACTCATTTCATATTCGGCGGAGCT
TTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCT
ATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAAT
CTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAG
TTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTTGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCC
ATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACC
GAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATG
ATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTAT
GCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGA
CATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAG
AAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACTGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTA
AAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGAC
AAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGCAAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTAATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATA
TTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCCACTCGTGTTCGCTCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATATGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAAT
TTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGCTTACCATCAAAATTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTTTTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTC
TATAAAAGCTATTGTTTACGTTCTGATGATGCAACTAAGTGATTTAGTAATCTTTTGGTGTTTGAAAAAAATAATTGGGCAAAGATGATAATCTCATTAAATAGTCCTCAGGCTAGACAGATTGGTGTTGGTGTAGTGGTTCTGGTTGCACCAATGAGTTGTCATTAACCTAATATTTGTGAACTTTTTCAATTCATCTC
AAATCAATATATGGTTCCCAAATGATTATTACCTCAGTCATGAAGGTTTTTTTCTTTGGTGGTTTAGGATAGGGACATGTTAGATTTGTAGCATGTCATGGTGTGGCGGAAGGAACTAAAAGATTGCCTGCATGTGATTTTCTAACATGATTGAAGATAAATTTTGTCCAACAGGTGGTCTTAAGTGGTGAAAGGCT
>TRINITY_DN113897_c0_g1_i3 from sample A2 / Example unspliced isoform:CATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACATTTTGCCGGTGATCGATCGGCCG
GCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGACTCATTTCATATTCGGCGGAGCT
TTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCT
ATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAAT
CTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAG
TTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTTGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCC
ATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACC
GAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATG
ATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTAT
GCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGA
CATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAG
AAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACTGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTA
AAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGAC
AAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGCAAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGgtaagcttgactgctttgccttgtccattgatgcttatgaaagattttaggtctctattgcatcttaaatgtctttgaaacatgt
gctatttgaccagCTTGATGCGTTAATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCCACTCGTGTTCGCTCACAGCCAAAGT
CAGTGTCTACAGGATTTTTGGCATATGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGCTTACCATCAAAATTTTGATAAGCTT
TTCTGTAAAACGCTTGAAGTTGTTTTTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTATTGTTTACGTTCTGATGATGCAACTAAGTGATTTAGTAATCTTTTGGTGTTTGAAAAAAATAATTGGGCAAAGATGATAATCTCATTAAAT
AGTCCTCAGGCTAGACAGATTGGTGTTGGTGTAGTGGTTCTGGTTGCACCAATGAGTTGTCATTAACCTAATATTTGTGAACTTTTTCAATTCATCTCAAATCAATATATGGTTCCCAAATGATTATTACCTCAGTCATGAAGGTTTTTTTCTTTGGTGGTTTAGGATAGGGACATGTTAGATTTGTAGCATGTCATGGT
GTGGCGGAAGGAACTAAAAGATTGCCTGCATGTGATTTTCTAACATGATTGAAGATAAATTTTGTCCAACAGGTGGTCTTAAGTGGTGAAAGGCT
Intron 3 GTGAAGGCCG ... CACTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.61 | 94 | 20 | 23 |
| A2 | 19.53 | 68 | 20 | 13 |
| A3 | 23.31 | 51 | 14 | 17 |
| A4 | 20 | 56 | 8 | 20 |
| A5 | 21.13 | 28 | 9 | 6 |
| A6 | 17.07 | 17 | 3 | 4 |
| A7 | 17.97 | 105 | 19 | 27 |
| A8 | 19.07 | 87 | 12 | 29 |
| A9 | 16.47 | 71 | 14 | 14 |
| A10 | 20.5 | 95 | 26 | 23 |
>TRINITY_DN110955_c0_g1_i3 from sample A3 / Example spliced isoformAATTAAGATCCCCCGGAAAAAAACACTTTACAGCCCAACAAGTATTGGAAGCTCACTTTCCCGATGACCATTAATCTATGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGA
GCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACATTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATT
GCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGACTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATA
TATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCT
CTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAA
AGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATG
ATGAGGATGGCACCTTTAAGTATGAAGTCGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGA
ATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAAAAGCTCGGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGA
AGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCC
TTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAG
CTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAA
AAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTAT
CAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTAAAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAG
AGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGACAAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGCAAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTAATTGG
CTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCCACTCGTGTTCGCTCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATATGTCA
ATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGCTTACCATCAAAATTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTTTTGTA
AAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTATTGTTTACGTTCTGATGATGCAACTAAGTGATTTAGTAATCTTTTGGTGTTTGAAAAAAATAATTGGGCAAAGATGATAATCTCATTAAATAGTCCTCAGGCTAGACAGATTGGTGTTGGT
GTAGTGGTTCTGGTTGCACCAATGAGTTGTCATTAACCTAATATTTGTGAACTTTTTCAATTCATCTCAAATCAATATATGGTTCCCAAATGATTATTACC
>TRINITY_DN110955_c0_g1_i1 from sample A3 / Example unspliced isoform:AATTAAGATCCCCCGGAAAAAAACACTTTACAGCCCAACAAGTATTGGAAGCTCACTTTCCCGATGACCATTAATCTATGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGA
GCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACATTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATT
GCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGACTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTGAGTAGCTTAAATGTAACCGGGAATTGTCTTGTTGGACTAGCCTTAACGCCAAGCCCGCTATAAGTTCGTTATAAAAGAATTTA
TTGAAGCCCTAGAATTGACAATTTTCAGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTAT
CATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGA
ATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTA
AAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTCGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCT
CTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAA
AAGCTCGGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAAC
AACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTT
GCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGgtgaaggccgttaaaggcggtaaaaagcctatgcattttgatatatttttcgttataatatattatgtgcttgacacactttcttgttttattcttatttgaatttcttgtgattttttctctataaatacttaatttctttcgcctaa
actgatctttgacaacactgtgcagCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGA
TCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAA
GTGCTAAAATGTGCCACCGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGGTATGAATGTTTTTGTGTTCCTTTGCTTCTACCGTGATTGCATTCATTGCCGAATGAACTGCATGCCTGCTATTTCGATAGCTCATCCAT
TTTTCCTTTCCAGTCAATATGGACTGAGATACTGACTGGGTTTTGTGTTGATTTATGTTGTCCAGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTAAAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAA
GGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGACAAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGCAAGATTCCACTT
GGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTAATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCCACTCGTGTTCGC
TCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATATGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGCTTACCATCAAAA
TTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTTTTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTATTGTTTACGTTCTGATGATGCAACTAAGTGATTTAGTAATCTTTTGGTGTTTGAAAAAAATAATTGGGCAAAGATGAT
AATCTCATTAAATAGTCCTCAGGCTAGACAGATTGGTGTTGGTGTAGTGGTTCTGGTTGCACCAATGAGTTGTCATTAACCTAATATTTGTGAACTTTTTCAATTCATCTCAAATCAATATATGGTTCCCAAATGATTATTACC
Intron 4 GTAAGTATAG ... GATTTGATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 11.67 | 106 | 14 | 0 |
| A2 | 11.24 | 79 | 10 | 3 |
| A3 | 7.59 | 73 | 6 | 0 |
| A4 | 20.83 | 19 | 5 | 0 |
| A5 | 25.93 | 20 | 7 | 1 |
| A6 | 11.59 | 61 | 8 | 4 |
| A7 | 12.68 | 248 | 36 | 0 |
| A8 | 14.3 | 311.8 | 52 | 1 |
| A9 | 15.15 | 196 | 35 | 0 |
| A10 | 17.81 | 203 | 44 | 0 |
>TRINITY_DN113897_c0_g1_i8 from sample A2 / Example spliced isoformCATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACATTTTGCCGGTGATCGATCGGCCG
GCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGACTCATTTCATATTCGGCGGAGCT
TTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCT
ATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAAT
CTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAG
TTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTTGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCC
ATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACC
GAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATG
ATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTAT
GCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGA
CATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAG
AAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACTGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTA
AAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGAC
AAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGCAAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTAATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATA
TTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCCACTCGTGTTCGCTCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATATGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAAT
TTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGCTTACCATCAAAATTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTTTTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTC
TATAAAAGCTATTGTTTACGTTCTGATGATGCAACTAAGTGATTTAGTAATCTTTTGGTGTTTGAAAAAAATAATTGGGCAAAGATGATAATCTCATTAAATAGTCCTCAGGCTAGACAGATTGGTGTTGGTGTAGTGGTTCTGGTTGCACCAATGAGTTGTCATTAACCTAATATTTGTGAACTTTTTCAATTCATCTC
AAATCAATATATGGTTCCCAAATGATTATTACCTCAGTCATGAAGGTTTTTTTCTTTGGTGGTTTAGGATAGGGACATGTTAGATTTGTAGCATGTCATGGTGTGGCGGAAGGAACTAAAAGATTGCCTGCATGTGATTTTCTAACATGATTGAAGATAAATTTTGTCCAACAGGTGGTCTTAAGTGGTGAAAGGCT
>TRINITY_DN113897_c0_g1_i16 from sample A2 / Example unspliced isoform:CATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACATTTTGCCGGTGATCGATCGGCCG
GCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGACTCATTTCATATTCGGCGGAGCT
TTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCT
ATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAAT
CTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAG
TTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTTGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCC
ATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACC
GAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATG
ATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTAT
GCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGA
CATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAG
AAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACTGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTA
AAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGAgtaagtatagaattcttttctaaatctatgttgtaaattctgaa
tatgttttttggcagtgtagtccactcaatgagtttagtttttgataatcttctgatgttgatttgatagCAAGAGCAACTTGATCGGGAAAT
Intron 5 GTATCCTTCA ... TTTAAATTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 20.62 | 77 | 0 | 20 |
| A2 | 16 | 63 | 1 | 12 |
| A3 | 23.15 | 83 | 3 | 25 |
| A4 | 19.72 | 57 | 1 | 14 |
| A5 | 18.33 | 49 | 2 | 11 |
| A6 | 0 | 2 | 0 | 0 |
| A7 | 15.96 | 79 | 0 | 15 |
| A8 | 9.68 | 28 | 0 | 3 |
| A9 | 14.81 | 46 | 0 | 8 |
| A10 | 13.46 | 45 | 0 | 7 |
>TRINITY_DN110955_c0_g1_i3 from sample A3 / Example spliced isoformAATTAAGATCCCCCGGAAAAAAACACTTTACAGCCCAACAAGTATTGGAAGCTCACTTTCCCGATGACCATTAATCTATGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGA
GCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACATTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATT
GCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGACTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATA
TATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCT
CTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAA
AGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATG
ATGAGGATGGCACCTTTAAGTATGAAGTCGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGA
ATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAAAAGCTCGGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGA
AGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCC
TTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAG
CTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAA
AAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTAT
CAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTAAAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAG
AGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGACAAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGCAAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTAATTGG
CTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCCACTCGTGTTCGCTCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATATGTCA
ATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGCTTACCATCAAAATTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTTTTGTA
AAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTATTGTTTACGTTCTGATGATGCAACTAAGTGATTTAGTAATCTTTTGGTGTTTGAAAAAAATAATTGGGCAAAGATGATAATCTCATTAAATAGTCCTCAGGCTAGACAGATTGGTGTTGGT
GTAGTGGTTCTGGTTGCACCAATGAGTTGTCATTAACCTAATATTTGTGAACTTTTTCAATTCATCTCAAATCAATATATGGTTCCCAAATGATTATTACC
>TRINITY_DN110955_c0_g1_i4 from sample A3 / Example unspliced isoform:AAAGAAATCTTCAGGGATTATCAgtatccttcatttgttcacttcgcatttttttttgcaatatttcttatacggtcaagatggttaggttaaaactgttcagtgcctgctccatgctgatatagcgtgtgcttcaagtattaacttgatgtttgtcaagagtgtgcttcatgtcttcactcttttgtttgactgcattg
cacaattctttagtaggtagtctgcttattggcgggatgcttccacttcaagaggagtattattgcattaccttaatttttaaattagAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACA
GAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGA
TGATGATGAGGATGGCACCTTTAAGTATGAAGTCGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGT
ACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAAAAGCTCGGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAA
GTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTT
CTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGG
GAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGG
AGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGA
TTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTAAAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTG
AGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGACAAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGCAAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTA
ATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCCACTCGTGTTCGCTCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATA
TGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGCTTACCATCAAAATTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTT
TTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTATTGTTTACGTTCTGATGATGCAACTAAGTGATTTAGTAATCTTTTGGTGTTTGAAAAAAATAATTGGGCAAAGATGATAATCTCATTAAATAGTCCTCAGGCTAGACAGATTGGTG
TTGGTGTAGTGGTTCTGGTTGCACCAATGAGTTGTCATTAACCTAATATTTGTGAACTTTTTCAATTCATCTCAAATCAATATATGGTTCCCAAATGATTATTACC
Intron 6 GTTTTGTGTT ... TTGTCTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 51.72 | 14 | 4 | 15 |
| A2 | 54.79 | 33 | 5 | 40 |
| A3 | 50 | 29 | 5 | 29 |
| A4 | 54.9 | 23 | 5 | 28 |
| A5 | 50 | 13 | 0 | 13 |
| A6 | 50 | 3 | 0 | 3 |
| A7 | 50 | 36 | 3 | 36 |
| A8 | 50 | 3 | 0 | 3 |
| A9 | 51.72 | 14 | 0 | 15 |
| A10 | 53.85 | 18 | 0 | 21 |
>TRINITY_DN101659_c0_g1_i10 from sample A4 / Example spliced isoformATTGGAAGCTCACTTTCCCGATGACCATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAA
CATTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCAC
GACTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGGTTTGATTTATATATTTCCGAACAAGCGGGAAATTTTTAAAGTCTTAATTGTCTCATGTGTGGTTGCTTTGCTGAAGGGATTAGATTTGCGGTGATAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTA
ATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGT
TTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAA
AGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAA
ACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTTGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATC
AACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGG
AAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATG
GTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAAT
ACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAAC
GGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTG
GTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTAAAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCA
AGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGACAAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGC
AAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTAATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCC
ACTCGTGTTCGCTCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATATGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGC
TTACCATCAAAATTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTTTTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTATTGTTTACGTTCTGATGATGCAAAAA
>TRINITY_DN101659_c0_g1_i12 from sample A4 / Example unspliced isoform:ATTGGAAGCTCACTTTCCCGATGACCATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAA
CATTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCAC
GACTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGGTTTGATTTATATATTTCCGAACAAGCGGGAAATTTTTAAAGTCTTAATTGTCTCATGTGTGGTTGCTTTGCTGAAGGGATTAGATTTGCGGTGATAGgttttgtgttatggaggctggatttcatttcgcatttattattattatttttaagccggatac
atttttacgttcttgaattttttctgcactcgtttggttccctatatggaagcaacgagggcttcgactcgaatttggccttaaactgttttccatttgtcttcagGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTA
CAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCT
CTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGT
CTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGA
AGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTTGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCAT
GACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACC
AAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAG
CACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTT
TTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGA
GCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAA
ACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTAAAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATA
AAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGACAAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGCAAGATTCCACTTGGGGCTACTACAGTGCAAA
AGAAGAGCTTGATGCGTTAATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCCACTCGTGTTCGCTCACAGCCAAAGTCAGTGT
CTACAGGATTTTTGGCATATGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGCTTACCATCAAAATTTTGATAAGCTTTTCTGT
AAAACGCTTGAAGTTGTTTTTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTATTGTTTACGTTCTGATGATGCAAAAA
Intron 7 GTTTGATTTA ... GCGGTGATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 20.48 | 66 | 20 | 14 |
| A2 | 22.37 | 85 | 16 | 33 |
| A3 | 21.99 | 94 | 24 | 29 |
| A4 | 25 | 69 | 23 | 23 |
| A5 | 26.88 | 34 | 12 | 13 |
| A6 | 25 | 6 | 1 | 3 |
| A7 | 26.11 | 58 | 5 | 36 |
| A8 | 27.27 | 12 | 6 | 3 |
| A9 | 25 | 42 | 14 | 14 |
| A10 | 24.27 | 39 | 7 | 18 |
>TRINITY_DN101659_c0_g1_i7 from sample A4 / Example spliced isoformATTGGAAGCTCACTTTCCCGATGACCATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAA
CATTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCAC
GACTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATT
TTGATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGT
TTCAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGA
ATGGTCCAGTTCAGTGAGTTTCTTGAACATTTTCCAATATTTAGTAGCGACTTAGTGAATCATTATTTGAATCCTAAACAATATATACATTTCTGATAGTTGTTCCTACTAGGCATGCTGGATATGGCTATTAATTTGTACAATAATTCTCCATTGATTTGTCTTGTTCTATA
>TRINITY_DN101659_c0_g1_i10 from sample A4 / Example unspliced isoform:ATTGGAAGCTCACTTTCCCGATGACCATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAA
CATTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCAC
GACTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGgtttgatttatatatttccgaacaagcgggaaatttttaaagtcttaattgtctcatgtgtggttgctttgctgaagggattagatttgcggtgatagGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTA
ATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGT
TTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAA
AGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAA
ACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTTGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATC
AACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGG
AAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATG
GTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAAT
ACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAAC
GGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTG
GTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTAAAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCA
AGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGACAAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGC
AAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTAATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCC
ACTCGTGTTCGCTCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATATGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGC
TTACCATCAAAATTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTTTTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTATTGTTTACGTTCTGATGATGCAAAAA
Intron 8 GTATGAATGT ... TGTTGTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 14.84 | 120.6 | 21.4 | 17.2 |
| A2 | 13.77 | 112.3 | 18.3 | 6.9 |
| A3 | 18.29 | 110.2 | 25.1 | 12 |
| A4 | 22.51 | 42.1 | 12.5 | 2.5 |
| A5 | 14.13 | 31.4 | 5.4 | 2.3 |
| A6 | 6.05 | 68.5 | 4.5 | 12.6 |
| A7 | 10.91 | 302.4 | 37.5 | 34.8 |
| A8 | 12.5 | 344.7 | 50.2 | 43.3 |
| A9 | 8.09 | 200.7 | 18 | 19.6 |
| A10 | 12.49 | 241.9 | 35.4 | 18.9 |
>TRINITY_DN118372_c5_g1_i1 from sample A1 / Example spliced isoformCGGGAAGTTCGTTATAAAAGAGTTTATTGAAGCCCTAAATCCATCACTTTTGCAAGTTCTGTTAATTATGTACCAGAACCGAAGCTGGAGCTCGGCAGTCAGGCGTAGCGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCTATTTGCATCATTC
TTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAATCTTCAGGGATTAT
CAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTAT
TAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTCGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCCATAGAGAGCGTGG
AAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACCGAGTGATGGAAAT
AAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTAC
AGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTATGCTCTTCTCCGGA
TTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGACATTTTGCATGAG
CTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAA
TGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTAAAGCAAAAATTGG
ATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAACAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGACAAATTCATTAGGG
AGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACTGTTTGTTGAAAAGCAAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTAATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCAAT
GCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAGCTTTACGGCGTTCCACTCGTGTTCGCTCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATATGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGTAG
CAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAGTCAGAGAAGATGGCTTACCATCAAAATTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTTTTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTATT
GTTTACGTCCA
>TRINITY_DN118372_c5_g1_i6 from sample A1 / Example unspliced isoform:TGGAAGCTCACTTTCCCGATGACCATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACA
TTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGA
CTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTT
GATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTT
CAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAAT
GGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTCGGTTGGCTTGACAAAA
ATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAG
CAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTC
TTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGT
CACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAG
TTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGA
TCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGgtatgaatgtttttgtgttcctt
tgcttctaccgtgattgcattcattgccgaatgaactgcatgcctgctattacgatagctcatccatttttcctttccagtcaatatggactgagatactgacagggttttgtgttgatttatgttgtccagTGATGGTAATCAGTCTCATACA
Intron 9 GTGAGTAGCT ... CAATTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 38.39 | 87.3 | 32.7 | 53 |
| A2 | 30.5 | 86.3 | 25.2 | 37 |
| A3 | 24.46 | 79.1 | 28.2 | 24 |
| A4 | 29.11 | 62.5 | 23.1 | 25 |
| A5 | 29.01 | 30.4 | 9.3 | 12 |
| A6 | 35.49 | 9.2 | 0.8 | 5 |
| A7 | 30.46 | 64.6 | 6.8 | 28 |
| A8 | 42.15 | 19.4 | 3.3 | 14 |
| A9 | 25.94 | 38.1 | 4.1 | 13 |
| A10 | 43.71 | 41.7 | 12.6 | 32 |
>TRINITY_DN118372_c5_g1_i6 from sample A1 / Example spliced isoformTGGAAGCTCACTTTCCCGATGACCATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACA
TTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGA
CTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGGTCAGGGCCATCACTGCTGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTT
GATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTCTGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTT
CAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTGTAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAAT
GGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAGTCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTCGGTTGGCTTGACAAAA
ATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCCTTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAG
CAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAAGCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTC
TTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAGGAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGT
CACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAAGCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAG
TTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGAATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGA
TCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCGGAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGGTATGAATGTTTTTGTGTTCCTT
TGCTTCTACCGTGATTGCATTCATTGCCGAATGAACTGCATGCCTGCTATTACGATAGCTCATCCATTTTTCCTTTCCAGTCAATATGGACTGAGATACTGACAGGGTTTTGTGTTGATTTATGTTGTCCAGTGATGGTAATCAGTCTCATACA
>TRINITY_DN118372_c5_g1_i9 from sample A1 / Example unspliced isoform:TGGAAGCTCACTTTCCCGATGACCATTAATCTACGACATTTCGCCATCACCGTTGCCGGGAACTTTTCAGGTGAAAGGGCGGGCTCGTCAAATTTCCCAAACCTTGAAAGCTATCTTGGAAGAACAAAGCGAAGAACACAACTGAAGGTAGAAGAGCAGACCCTTAGCCATACATTTTGTCGGGTCCGTTCGTCGAAACA
TTTTGCCGGTGATCGATCGGCCGGCTCTGAGGTTGCCGCAAATCAACAGAGGAGCTCGAGGCCTTTAATTTGAGCCTTTAATTGACTGTTGCCGTTAAAGATTTCCATTTTTTTTGTTTTTCTCAACTGGAGGTTAGAGCTGTTGGCGCTCAATTGCGCCTTCGGTAGCTGGATTTTAATGCATATTTTTATGTCCACGA
CTCATTTCATATTCGGCGGAGCTTTCACGTTTTCCAGGGTTTATTGGACAATATTCGATCTTTGAGCCGgtgagtagcttaaatgtaaccgggaattgtcttgttggactagccttaacgccaagcccgctataagttcgttataaaagaatttattgaagccctagaattgacaattttcagGTCAGGGCCATCACTGC
TGCGAGTTCTGTTAATGCTATACCAGAACCAAAGCTGAAGCTCTACAGCCAGGCGTAGTGCAGGAGATATATAATTCAAGGAGAACAATAATACGGATCAGTTGGAGGGATTTTGATACCTTGAAGCTTGGATTTCTATTTGCATCATTCTTTATCATTTCCAGGGCGGGCCTTGGAGTGCCGTACTACTACATTCTTTC
TGTTGAGGTTTTGTTTCGGGGGTCTGAGTTCTTTTCTCTATGCCTCTCTTCAAGAGGAAACCGTTTCCTCTTGCTGAACCTCCGGAAGACATTAAGCCCAATGAGCAGGTGTTTCAAATTCGATTCACGAAAGAAATCTTCAGGGATTATCAAGAATATTTGGAACGAATAAATCTTTACCGTCAGAGGGTATGGGTGTG
TAAAGTGTCAGGAAAGATAAATCTAACTTACGAAGAGGCACTTGTCTCTGAGCGTCGTGCAACAGAGAAAGTTCAGCACTTTCCGAAGGAGCTAATTAGACCAGTTTTGCGAATGGTCCAGTTCAAGACACTTAGAGTTAAAGAACTTATTAGTAAAATATCAAACAGCATCAAGGACTTTTATCTGGAAGGTGAAGAAG
TCACAGGTCGGAAAACAGATTCCTTATTCCCCTGTAAGATTCTGAAGGTCATCCAAGAGGTTGATGATGATGAGGATGGCACCTTTAAGTATGAAGTCGGTTGGCTTGACAAAAATAAGAAAGTAACTGATACATCCATAGAGAGCGTGGAAGCTCTGATTCGAAAGAAGCCTCTTGTTACACAAGATGTCTTGAAGTCC
TTTATAAGAGAATCAACTTCGTCCAGTACACCTTGGATAGTTCATGACGAATTGGCACGGAAGTACAGAATCTCCACTGACCCCCCTGAGGATCTCAAGGACAAAATAATTAAGCAGGAAAAACAGCACAGTCAACCGAGTGATGGAAATAAAAAAAGCTCTGCACAGAACATGGAAAATGGGGATTCTGGCACTAAAAA
GCGCAAATCAAAGGAAACAGAAGAGTTGGAGGAAGGATCCAAACCAAAAAAAAAGAAGGAAAAAGTTGAAGAGCAGCCAAAAGTGGAACCTATTAAGTATCCCATAGAGGATTCTTTGGTGCAGCCTGGTCCAGATGATCCTGTTTTTACAGAACAACCATCTGCAGCAACGGATTTTCTTGCACCAATGGATTGTGTAG
GAGATGTTCTGATGGTCTGGGATTTTTGTTCTTCTTTTGGGAAAGCACTTCATCTGTGGCCTTTCTCCCTTGAGGATTTTGAAAAGGCCGTTGATCACAAGGAAGGTGACGTGTCACTCTTGGCAGAGACACATTATGCTCTTCTCCGGATTGTTGCAAAAGATTCCAGTGCCTACCAGGATTTAATTCAGAAGAGAAAA
GCTAAGCCATCAATACAGAATTGGCAGGATCATCTCTGTGATTTTTTGGAAGTAGAAGAAGTGGGAAAGCTTTTGGGTCATTTGGAAACAATTAGGTCTGGTGGTTACAGTGAGTTAGATCCACGTTCAAAATTAGACATTTTGCATGAGCTAGTTGACAGAGCTCTTACTTCTGATGTGATCAGAGGTCAGCTAGATGA
ATACATTGAAGAACGGCATGCCCTTGCAGCTACAAAGCGAGAAGAGCAAATGGAGGAATCTAGGAGAAAAAAAGAAGAACATCTTAAACAACTAAATGGTCAAGGTAAGGATGATCCAGATGAAAATGCTACCAAAGAAGTTGGAGATAATGATAGGGCCATGGATGCTTCAGACACAGAAGTGCTAAAATGTGCCACCG
GAGAGAATGGATTGGTTTCAGATGATGCTGTAAGGGAAAGTTCAAACGAAAATGGTATTAAAGATTTATCAGAAAATCATTATGAAAATGGTGATGGTAATCAGTCTCATACAACAACATCAAGACAAGCTGCTTTAAAGCAAAAATTGGATGCAAAAGCTGCTGAAGAAAGAGAGAAAGAAATGGTCAGGACTGAAGAA
CAAAAGAAAATGCAAGAGAAAAGAAAGGCAAAAGCTGAGTTAATAAAGGAGCAGAAACTTCGTGAGCAGAGGGCATTAGAGTTACAGAAGAGACAAGAGCAACTTGATCGGGAAATAGAAAAACGGTTCATTCGGACAAATTCATTAGGGAGGGATAGGGCTTATAACAGGTACTGGTTTTTCCGTAGAGAGGGGCGACT
GTTTGTTGAAAAGCAAGATTCCACTTGGGGCTACTACAGTGCAAAAGAAGAGCTTGATGCGTTAATTGGCTCCCTGAATCCAAAGGGCGAGAGAGAGATGGCTTTACAAAGGCAGTTAGAGAAGCATCACTTAAATATTAGTCATGCAATGCAGAGGAGGTCGAAGGACATTGCACAGAAGTTTGCAATGGAAGAAGCAG
CTTTACGGCGTTCCACTCGTGTTCGCTCACAGCCAAAGTCAGTGTCTACAGGATTTTTGGCATATGTCAATAAACATAGAGGCTAATGGTTTAGCTGCCGAAGCCCTTGAATGACATATTTTCCTTATTTTGAGAATTTGATGCTAGTAGCAAGCTACTGGTCAAAACTCACAGCCAGATATGAAGAATCTGACAAGAAG
TCAGAGAAGATGGCTTACCATCAAAATTTTGATAAGCTTTTCTGTAAAACGCTTGAAGTTGTTTTTGTAAAGTATTCTAAAACTCAATATTATTCTGCCCAACACCATTCTTAAATTGTGGCCCATTTTGCTGTCTCTATAAAAGCTATTGTTTACGTCCA