sp|Q6F3A6|CDPKA_ORYSJ ----> Calcium-dependent protein kinase 10

Intron 1 GTATTCCCTC ... TTTTCTACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	12.31	73.8	20.1	10.4
A2	25	36	6	12
A3	15.04	64	24.4	11.4
A4	32.05	31	13.1	14.6
A5	27.27	32	9	12
A6	21.06	258.4	113.6	68.9
A7	18.88	332.9	124	77.5
A8	18.85	306.8	123.2	71.3
A9	18.92	297.6	122.3	69.5
A10	20.54	367.2	162.6	94.9

>TRINITY_DN134331_c0_g3_i2 from sample A1 / Example spliced isoform

CGGAAGAGGCCGATTCGGAGTCATCAGGAGATGTTGGAACAAGCAAAGTGGGCAACAGGCGGCCTGCAAGACTGTAAGAAAAGAAGATCTTCTTGATTCCATTGACAGAGAATGCCTCAGCAATGAAATCAAGATTATGCAGTATGTCTCAGGTCACCCTGCTGTTGTTGCCCTTCATGACGTTTATGAGGATGATGAGT
TTGTACATCTAGTAATGGAGATGTGCTCAGGAGGAGATCTGTTTGACAGAATCGTCAGCAGGAAGAATACAGTTCCCTTCTCAGAAGAGGAGGCGGCCACTATTCTGCAGAAACTCATGGAGGCCATCAGTTACTGCCACTCCATAGGAATCGCCCATCGAGATGTAAAACCTGACAACATTCTCTTTGCCAGTAATTCA
AATTCCCTTGCTCAAATCAAGCTTGCAGACTTTGGACAGGCCGCCTCTTTCTCTCCAGGGCAAGGATTTATGCAAGGAATTGTGGGTACTCCGTATTACGTAGCACCGGAGGTATTGGGTGGAAAGGATTATACTGAGACAGTAGATGTGTGGAGCGCAGGGGTGATCTTGTACATTATGCTCAGTGGAGCTGCCCCTTT
TGTTGGAGAGACGCCACAGGAAATATTTGAGGCAGTTCTTTTTGGGCGCCTTCGCTTCCCAAGTGATCCATGGCTCTCAATATCTCACTCTGCAAAGGACTTGATACGCCGGATGCTCTGCAGAGACGTTACTAAGAGACTCAGCGCACACCAAGTCCTAGAGCATCCATGGATCAGTACTCATGCCCTGCGCAATCCCA
GCGAAGCCAAAGTTTTTATTGGGCGTGGACTGTAAAAGCAGAAAATACTGAATGATTTCCAGCAAACGATGAGATATGGTGTTGTATAATGTTGTAAAGATTTGCTGCTCACCATTTTCCCCATGGGTGTGTTTTCCGCCCGAGTCCTTACAGGGGCATGCTCATTTTGTATATAATGTTGTAAAGGTCATTAGTCGGCT
GAGCCTGTGCTAGAAAAACCCAGGGTTTATGCTCGCGATCTACCCCCTGTGGGTTATTTTGTCCGCTTGAGTCTTTACAGTCGGCAATGTGCATGCTCATGGTACTGCTAAAAATAGTTCCTCATGGAAGATTTTGTGTGGTCTTTTAGGTTTTTGTGAAGGATCCATATGTAACACGGTTTTGAATATATAGAACACGG
CTTCTCATACAGAGAGACACTTTGAACAATGGCAGGCGGAGACTGGAGTTCCGTTGGGTTTACGTTGGAGAAAGAGTGTACCGTTCGAGTAGGAGTAGTACCCTGGATAACGGGTGAAGTCATGGCTGCACTGTGCGTGACATAATGAGAGCGTAATTATGTCAAATACGTTTTGTAGAAATGAATATACTGCAAGAGCA
GTGCGTGATATACAGTGTAAATATGTCAATACATGTGAAAATATAATATATATAGAAAGAGCGTTTATAGTTTCGGTTTCTTCTTTCCAACTCAATTGTTCAATTCAATTTTATGAGATATTTGTAGGTGC

>TRINITY_DN134331_c0_g3_i6 from sample A1 / Example unspliced isoform:

ACTCAGCGCACACCAAGTCCTAGgtattccctcttttctaccattaacagtggaaatcgcagcttcaatacaaactgctgttgggttgtgtaaaattcatggaatattgatgagaaatatttttttttctacagAGCATCCATGGATCAGTACTCATGCCCTGCGCAATCCCAGCGAAGCCAAAGTTTTTATTGGGCGTG
GACTGTAAAAGCAGAAAATACTGAATGATTTCCAGCAAACGATGAGATATGGTGTTGTATAATGTTGTAAAGATTTGCTGCTCACCATTTTCCCCATGGGTGTGTTTTCCGCCCGAGTCCTTACAGGGGCATGCTCATTTTGTATATAATGTTGTAAAGGTCATTAGTCGGCTGAGCCTGTGCTAGAAAAACCCAGGGTT
TATGCTCGCGATCTACCCCCTGTGGGTTATTTTGTCCGCTTGAGTCTTTACAGTCGGCAATGTGCATGCTCATGGTACTGCTAAAAATAGTTCCTCATGGAAGATTTTGTGTGGTCTTTTAGGTTTTTGTGAAGGATCCATATGTAACACGGTTTTGAATATATAGAACACGGCTTCTCATACAGAGAGACACTTTGAAC
AATGGCAGGCGGAGACTGGAGTTCCGTTGGGTTTACGTTGGAGAAAGAGTGTACCGTTCGAGTAGGAGTAGTACCCTGGATAACGGGTGAAGTCATGGCTGCACTGTGCGTGACATAATGAGAGCGTAATTATGTCAAATACGTTTTGTAGAAATGAATATACTGCAAGAGCAGTGCGTGATATACAGTGTAAATATGTC
AATACATGTGAAAATATAATATATATAGAAAGAGCGTTTATAGTTTCGGTTTCTTCTTTCCAACTCAATTGTTCAATTCAATTTTATGAGATATTTGTAGGTGC