sp|Q42546|DPNP1_ARATH ----> SAL1 phosphatase
Intron 1 GTGCTTAACA ... TGTTGCATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 20 | 38 | 4 | 15 |
| A2 | 23.08 | 30 | 4 | 14 |
| A3 | 17.12 | 46 | 7 | 12 |
| A4 | 15.07 | 31 | 6 | 5 |
| A5 | 15.15 | 14 | 1 | 4 |
| A6 | 20.25 | 128 | 31 | 34 |
| A7 | 14.4 | 110 | 21 | 16 |
| A8 | 17.76 | 88 | 14 | 24 |
| A9 | 20 | 116 | 31 | 27 |
| A10 | 14.97 | 71 | 8 | 17 |
>TRINITY_DN43369_c3_g1_i4 from sample A9 / Example spliced isoformGCTCGATTGACGGAGCTCAACTGGTCATCCAGATATTTCCCCGGTTATAAAAAAGAAAAAAAAAAAGAAAAAAGATCTGATATCCCATATCCAACGAGGTGGAGGGCCCACTATTTCTGGATTTTATCACAACCACAATAAAAAGGATGTTTTGGAATATGTACGCGTTGGAGATGGTTAGTGTTATCTTGTATCTCTTA
CTACTGTTAGAGATAAAGTCTGAATATCTATCAATGGCGTGGTCGTGTAAATTTTCATTTCAATTTACGAGAACTTTTAGTGCCAGCTCATTCGTTTTCCTTCCAACTACAACCCTGCCCTTACATTTACATTTCCCCGGTATAAGTGCGAGGAGGAACATCACCACCAAAACAACAAGAGCGAAGATGGGGATCGGGGA
ATACGATCAAGATCTTGCCGTTGCAATCAAGGCCGCCTCTCTTGCAGCTCGTCTATGCCAGTCAGTGCAGAAGAGCCTTTTACAAACAGATACTCAAGCCAAGATGGACAGGTCTCCTGTTACTGTTGCGGATTACGGTTCTCAGGCTTTAGTTAGCTTTGTACTTGAAAGGGAATTGCCCTCGAGATTGTTTTCCATGG
TTGCAGAAGAGGATTCAGAAGATTTACAGAAGAATGGTGCACAAGATACAGTGGAGCGCATTACAGCACTTGTAAATGAAACCATTTCTAATGATAGTACTTATAATATTTCCCCATTAACATCAGGAGATGTACTTGCAGCGATAGATAGAGGTAAATCTGAAGGAGGCCCCCATGGTCGGCACTGGGTTTTGGATCCC
ATTGATGGGACAAAGGGATTTCTTAGAGGAGACCAATATGCTGTAGCCTTGGGCCTATTGGATGAAGGAGAAGTTATTTTGGGTGTGCTGGCCTGCCCAAATTTGCCCTGGACATCAGTTAGCATTGGTGCTCGCCCTTCAAATGATCCAATTGGTTGTCTTTTTTCTGCAACAAAAGGAGCTGGCACTACAGTGCAATC
ATTAGATGGTTCTGTACAGCCTAAAAGGGTGTATGTAAGTGCCATTGAAAAGTCTGAAGAAGCATCCTTCTTTGAATCATACGAGGCAGCACATTCCATGCATGACTTGACAGCTACAATAGCTAAGATCCTGGGTGTAAAAGCACCACCAGTTAGAATAGATAGTCAGGCAAAATATGGAGCAATGGCAAGGGGTGATG
GAGCAATATATCTTCGCTTTCCTCGTCCAGGCTATCGTGAAAAGATTTGGGATCATGCAGCTGGTTGCATCGTAATCCAAGAGGCTGGTGGTGTTGTGGTTGATGCTGCCGGGAAACCTCTTGATTTCTCACAGGGGAGGTATCTGGATCTGGAAAAGGGTATAATTGCAACCAATGCCAAGCTGATGCCATTGGTTCTT
AATGCAGTGCAAGCTGCTGTAAAGGAAGAAGAAAATGTTCGAAAGGCTGGTTCCTTATAGGATCACTCATTTTTTGAACCTAATTAGCAATGGAAGTTGCAACTTATGCTAATGAAATAAAATAATAGTATTTGGACAATGTCCTTCCTTTAAGAGATATAGCATATAGTGTCGTCGTAGGTGTGTCAACTAGCCCCGGC
CACATTTGCAGTGATAGAAACTAAGTTGAAAATGGAGGTACGCAATTTTCCTTCAATTTTAAATGTGCCAGTCTAGCAGATGATGCGTTGTTGATGCTTTTGTTTGGCTTGGCTAACATGATTGCTAGTTGGTTGGGCTTACCAATCAATCAGTCATTTGCATCACCTCCTCCCTGGGCCTACACATACATTTCAACTAT
GCATTATATCGTGTTTTCACAGGGACACAAATTCGGTGGTCTCACCAATTCCGATAGTTTTATATATACGGTGGATGGACAATCACACACCCATATTTTGCTTGATGCATTTTTCTTTTGTCCTATTTATAATAGAGGTTGAAGAATTATAATTGTTCTTCAGACCCAAAAAGGGAAGATCGCGTTAAAAGTTTGTTTTA
CTCACTGCATTGAGTTATGTATTTCCCATTGAGTGCATGTTCAAGTGATGCAATTTAGAAAGAATTGGATGGATGAAATTGGCGCAGCATAGAATTACATCCAGATGACCACTAGTCTGAGGAATCCCACTTTGTTGCTGTCTATGAGAACCTTCCTCCCTTTTTTTGGCACCTCCTGCTATAATTATCGCTATTATATG
ATTTTAGTTTAGTTTTATGCCACGCAATGAGGCATTGATAAATGCTGCTGTCAAACAATGTGCTAGAGAAGTAGAGACCATTATTATCTATATATATAGGCCGATCGTTTCCTTTTACCTAGACAATTCGTCATCATCAGATTGGAGAGATGGTCCCATGTTACAATACATCACGTCGTGGCGATATGCCACCTCCCCAT
TCTAACTCTTTGAAGGAATACCTACATGTTCCAGCCAAAGTCACCAGATTCGGAATGACAAAATCTTGGCGAGGCCAAAAAAGGAGTTTGAAGTGGATTGGGGATCAATTGTGAAAAACTTGGCAAG
>TRINITY_DN43369_c3_g1_i9 from sample A9 / Example unspliced isoform:CTCTTGCAGCTCGTCTATGCCAGAAAAAATGCATAATTTTGTTATAAATATAATAAAACTACATTCTTCATATCCAAAATCTCTGTATAGATTCAGTGCAGAAGAGCCTTTTACAAACAGATACTCAAGCCAAGATGGACAGGTCTCCTGTTACTGTTGCGGATTACGGTTCTCAGGCTTTAGTTAGCTTTGTACTTGAA
AGGGAATTGCCCTCGAGATTGTTTTCCATGGTTGCAGAAGAGGATTCAGAAGATTTACAGAAGAATGGTGCACAAGATACAGTGGAGCGCATTACAGCACTTGTAAATGAAACCATTTCTAATGATAGTACTTATAATATTTCCCCATTAACATCAGGAGATGTACTTGCAGCGATAGATAGAGGTAAATCTGAAGGAGG
CCCCCATGGTCGGCACTGGGTTTTGGATCCCATTGATGGGACAAAGGGATTTCTTAGAGGAGACCAATATGCTGTAGCCTTGGGCCTATTGGATGAAGGAGAAGTTATTTTGGGTGTGCTGGCCTGCCCAAATTTGCCCTGGACATCAGTTAGCATTGGTGCTCGCCCTTCAAATGATCCAATTGGTTGTCTTTTTTCTG
CAACAAAAGGAGCTGGCACTACAGTGCAATCATTAGATGGTTCTGTACAGCCTAAAAGGgtgcttaacacttctgcatcttttagctaagcagaatcttttgttggattgatattaactctatagttgaaatttctgtcttatttccatctgatattcaaagtggattgaatgtactgttgcatagGTGTATGTAAGTGC
CATTGAAAAGTCTGAAGAAGCATCCTTCTTTGAATCATACGAGGCAGCACATTCCATGCATGACTTGACAGCTACAATAGCTAAGATCCTGGGTGTAAAAGCACCACCAGTTAGAATAGATAGTCAGGCAAAATATGGAGCAATGGCAAGGGGTGATGGAGCAATATATCTTCGCTTTCCTCGTCCAGGCTATCGTGAAA
AGATTTGGGATCATGCAGCTGGTTGCATCGTAATCCAAGAGGCTGGTGGTGTTGTGGTTGATGCTGCCGGGAAACCTCTTGATTTCTCACAGGGGAGGTATCTGGATCTGGAAAAGGGTATAATTGCAACCAATGCCAAGCTGATGCCATTGGTTCTTAATGCAGTGCAAGCTGCTGTAAAGGAAGAAGAAAATGTTCGA
AAGGCTGGTTCCTTATAGGATCACTCATTTTTTGAACCTAATTAGCAATGGAAGTTGCAACTTATGCTAATGAAATAAAATAATAGTATTTGGACAATGTCCTTCCTTTAAGAGATATAGCATATAGTGTCGTCGTAGGTGTGTCAACTAGCCCCGGCCACATTTGCAGTGATAGAAACTAAGTTGAAAATGGAGGTACG
CAATTTTCCTTCAATTTTAAATGTGCCAGTCTAGCAGATGATGCGTTGTTGATGCTTTTGTTTGGCTTGGCTAACATGATTGCTAGTTGGTTGGGCTTACCAATCAATCAGTCATTTGCATCACCTCCTCCCTGGGCCTACACATACATTTCAACTATGCATTATATCGTGTTTTCACAGGGACACAAATTCGGTGGTCT
CACCAATTCCGATAGTTTTATATATACGGTGGATGGACAATCACACACCCATATTTTGCTTGATGCATTTTTCTTTTGTCCTATTTATAATAGAGGTTGAAGAATTATAATTGTTCTTCAGACCCAAAAAGGGAAGATCGCGTTAAAAGTTTGTTTTACTCACTGCATTGAGTTATGTATTTCCCATTGAGTGCATGTTC
AAGTGATGCAATTTAGAAAGAATTGGATGGATGAAATTGGCGCAGCATAGAATTACATCCAGATGACCACTAGTCTGAGGAATCCCACTTTGTTGCTGTCTATGAGAACCTTCCTC