NA ----> NA

Intron 1 GTAAGTTGAT ... AATTTTATAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	100	0	1	2
A2	-1	0	0	0
A3	100	0	4	2
A4	33.33	4	0	4
A5	50	1	0	2
A6	52.94	22	21	28.5
A7	62.27	23	43	33
A8	66.67	21	53	31
A9	60	23	41	28
A10	45.45	12	13	7

>TRINITY_DN44968_c1_g1_i1 from sample A6 / Example spliced isoform

GATGGATGCATGTCTAATGTCATGAGGACCGCCTTTATGGATTCACTCAATGCCACTTCCCCATCAGTTGAGCGTCCAACCTTTGTACCTGGTGATGTCTCCATGGGTAGAGGAAATGATGTTGCACAAGAGCAAAAGATGCATTCTCCCTCGAGTTCTGACCATTAGCCGTTAGTCGATGAGGATCAAGTACAACTAGG
GGTTGATACTGCATTAATGCTCACAGAGGAGTGGGAAAGGATGACTCAACGCCATCCTGGTGAAGATCCATCGACTTAGCATCATCTTGGAGTTTCCACACAACAAGATTTGGAAAACCTGCCATGGAATCAGGTCACTCCCCGTCTAATTTAGACACCAGTTTCGATCATGCGTCGCCTGTCGCCAAGGACAAGGTGCA
GGGGGTACTGGAAGTGCAGATGACTATAGAGCCCACTAGGGGCTTGGTCCACATATTTGACGATATATTTTCATGTTGCACTATTTTTATTGTTGTGCATACATATATACTTGTTTTTATATATATGCATATATACAAGTTCTGTATTTTTTTTATATACTTGAAGGACTATTGCGTTTCAAAA

>TRINITY_DN44968_c1_g1_i5 from sample A6 / Example unspliced isoform:

ATGGATGCATGTCTAATGTCATGGCACCCCACTAGCTAGACCGTATGGTGATCATGTATCTGGGAGCATCGTGGCCAGTATCTCACATGATAATCACAACACATTGACCTCCTCAGAGCACGAGGACCGCCTTTATGGATTCACTCAATGCCACTTCCCCATCAGTTGAGCGTCCAACCTTTGTACCTGGTGATGTCTCC
ATGGGTAGAGGAAATGATGTTGCACAAGAGCAAAAGATGCATTCTCCCTCGAGTTCTGACCATTAGCCGATCAAGTACAACTAGGGGTTGATACTGCATTAATGCTCACAGAGGAGTGGGAAAGGATGACTCAACGCCATCCTGGTGAAGATCCATCGACTTAGCATCATCTTGGAGTTTCCACACAACAAGATTTGGAA
AACCTGCCATGGAATCAGGTCACgtaagttgatccatccacttaaacttttaaaaatttgtcatctacgtaatttcaagtactcaaatataactaacttacaaagtacacaattttaaattttatagTCCCCGTCTAATTTAGACACCAGTTTCGATCATGCGTCGCCTGTCGCCAAGGACAAGGTGCAGGGGGTACTGG
AAGTGCAGATGACTATAGAGCCCACTAGGGGCTTGGTCCACATATTTGACGATATATTTTCATGTTGCACTATTTTTATTGTTGTGCATACATATATACTTGTTTTTATATATATGCATATATACAAGTTCTGTATTTTTTTTATATACTTGAAGGACTATTGCGTTTCAAAA