NA ----> NA
Intron 1 GTGAGATCTC ... GGTGTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 58.18 | 23 | 17 | 48.4 |
| A2 | 60.08 | 22 | 32 | 34.9 |
| A3 | 52.81 | 25 | 10 | 47.4 |
| A4 | 57.69 | 20 | 16 | 39.1 |
| A5 | 70 | 7 | 13 | 19.9 |
| A6 | 50.85 | 49 | 30 | 73.9 |
| A7 | 54.69 | 62 | 55 | 97.6 |
| A8 | 53.6 | 32 | 22 | 53.1 |
| A9 | 61.06 | 40 | 40 | 87.9 |
| A10 | 52.88 | 51 | 48 | 67.4 |
>TRINITY_DN115130_c0_g1_i5 from sample A1 / Example spliced isoformCAGCACGTCTTTGTAACGAAAGGCTAGGATGATCTTCAATCATGAGCATTTTTGGTTTTTGGTCATCTTTGTATGTTCACTTTTGCTTCTATCCTCTTGGAATTTTAACTTCCAAACTTGGATGAGTCGGTAGAGCCACCACAAGTACCAATAATAAGGAAGACCATGCGATTTCAATTCCTATTCGACTGCTTACTGCC
TTGCAAAGAGAGAAAGTGCTTGAGTCACGTTTGTATGAACTACAGACCCAATTGGAAGGCTTGATTTGGGTAAACAAAGACCTGGAACATAGATTGGAGGTGGCCATTAAAACCCAAAAGAAAACAGAAAATTTGCTTGCTGAAGCCGAAGAGGAGCAAGATGGGGCGATTGAGAAGCTCCAACTTCTAGAGATCAAGAT
AAGGGACATAGAAGCTGAAAATCTAAAGTTCAGAGAAATAGAAAAGAGGGCACTTCTTGAAGCTGAAGCAGCAAAGAATGTCGAAGAAAGTAAGAAAATAGATAATGGGCATGTAGCAGAACACAGTCTTTTGGCAGGAGGAGATGGGATTGGCTCTGATGCTGAAGATAAAGCATGGAACTCATTGTTTGAAAAAAGGG
GAAATATCCTTGGCGGTTATTTAATGGGCAAGGGAAGAAGGGTTCATGGTTCTAAAATGGAGATTGAAGAGCTGGATCGTTTTTTGGAAAGCAGGATGACTGCATCTGGTGATTTTTCATTTCCTTCTGATTCATTTTCAGAGAAACAAAAGGAGAAGGATGAAATAAACTACCAATGGAAAGGAGTTGCACTAGTACAA
ACTACCTTCAGTGCCTTTCTTTCTCTTCTTGTGGGCATGATAGCTTGGGAGGCTCAAGATCCTTGCATACCATTAGTAATTGCGTTGTTTATTGTAGTAGGTATGTCCTTGAAGAGTGTTGTCCAGTACTTCTCAAGAATCCAAAACAGACCAGGGTCTGATGCCATTGCACTATTGAGCTTCAACTGGTTTATTCTTGG
AACTCTGGCATCTCCAACCTTACCTAATGTTGCTCGGTTATTGATCCCTTTGGTATCTGGCATTGGGTGTAGATTAGCAAGATGGTTTGGTTTTTCATTAGTATAAGGAAAATTAAAAGAAATAAAGTGTTTCTTTACTCTGCCATGTAAAGTTTTATAAGCGTGTGTATTGAATAGCAGCAGAAAGGATACGGGCCTCC
TGTTAAAATGCCACTATGTAACTTGTCTCACCGATCTCACGCTAAACTCTGGGTTATCAATCTGTGAAAAGATTTCTTGTAAATTTACTCCATGGAAAGATGTCTACTGGCTTCAAGCAGGAAACCAGTTTCCTGCCTTCATTTTATCTGGCGTGGAGCAGGAAACCAGTTTCCCACCTTAAAATCTTCGATTGTAAATA
CAAAAACCATTAACATTGAGACTAAGCAAGGTTGTAATATCTTATTTTAGTGGCAATGACTTCATCATTTTCGTGTCGTCAGTTCAATTGGGAATAAAAGTATCAGCTGAAAAGAATCAATCTTAGAAGACCCTTTGCATCCCAC
>TRINITY_DN115130_c0_g1_i1 from sample A1 / Example unspliced isoform:CAGCACGTCTTTGTAACGAAAGGCTAGGATGATCTTCAATCATGAGCATTTTTGGTTTTTGGTCATCTTTGTATGTTCACTTTTGCTTCTATCCTCTTGGAATTTTAACTTCCAAACTTGGATGAGTCGGTAGAGCCACCACAAGTACCAATAATAAGGAAGACCATGgtgagatctctgctggatctcattggaaatat
tattttcttggtcacagagccactgtccatgatcaggcttttatggcaactttgcatgaggattgtttgctttctaactcttccgtggtttggacttttcaaattcatctgtggtttatatttggacatatgctggcatttaatatcatggggtgtttcagCGATTTCAATTCCTATTCGACTGCTTACTGCCTTGCAAA
GAGAGAAAGTGCTTGAGTCACGTTTGTATGAACTACAGACCCAATTGGAAGGCTTGATTTGGGTAAACAAAGACCTGGAACATAGATTGGAGGTGGCCATTAAAACCCAAAAGAAAACAGAAAATTTGCTTGCTGAAGCCGAAGAGGAGCAAGATGGGGCGATTGAGAAGCTCCAACTTCTAGAGATCAAGATAAGGGAC
ATAGAAGCTGAAAATCTAAAGTTCAGAGAAATAGAAAAGAGGGCACTTCTTGAAGCTGAAGCAGCAAAGAATGTCGAAGAAAGTAAGAAAATAGATAATGGGCATGTAGCAGAACACAGTCTTTTGGCAGGAGGAGATGGGATTGGCTCTGATGCTGAAGATAAAGCATGGAACTCATTGTTTGAAAAAAGGGGAAATAT
CCTTGGCGGTTATTTAATGGGCAAGGGAAGAAGGGTTCATGGTTCTAAAATGGAGATTGAAGAGCTGGATCGTTTTTTGGAAAGCAGGATGACTGCATCTGGTGATTTTTCATTTCCTTCTGATTCATTTTCAGAGAAACAAAAGGAGAAGGATGAAATAAACTACCAATGGAAAGGAGTTGCACTAGTACAAACTACCT
TCAGTGCCTTTCTTTCTCTTCTTGTGGGCATGATAGCTTGGGAGGCTCAAGATCCTTGCATACCATTAGTAATTGCGTTGTTTATTGTAGTAGGTATGTCCTTGAAGAGTGTTGTCCAGTACTTCTCAAGAATCCAAAACAGACCAGGGTCTGATGCCATTGCACTATTGAGCTTCAACTGGTTTATTCTTGGAACTCTG
GCATCTCCAACCTTACCTAATGTTGCTCGGTTATTGATCCCTTTGGTATCTGGCATTGGGTGTAGATTAGCAAGATGGTTTGGTTTTTCATTAGTATAAGGAAAATTAAAAGAAATAAAGTGTTTCTTTACTCTGCCATGTAAAGTTTTATAAGCGTGTGTATTGAATAGCAGCAGAAAGGATACGGGCCTCCTGTTAAA
ATGCCACTATGTAACTTGTCTCACCGATCTCACGCTAAACTCTGGGTTATCAATCTGTGAAAAGATTTCTTGTAAATTTACTCCATGGAAAGATGTCTACTGGCTTCAAGCAGGAAACCAGTTTCCTGCCTTCATTTTATCTGGCGTGGAGCAGGAAACCAGTTTCCCACCTTAAAATCTTCGATTGTAAATACAAAAAC
CATTAACATTGAGACTAAGCAAGGTTGTAATATCTTATTTTAGTGGCAATGACTTCATCATTTTCGTGTCGTCAGTTCAATTGGGAATAAAAGTATCAGCTGAAAAGAATCAATCTTAGAAGACCCTTTGCATCCCAC