sp|Q9LJ97|LEA31_ARATH ----> Late embryogenesis abundant protein 31
Intron 1 GTAACAGCAG ... TTTGTGGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 68.87 | 118 | 97 | 261 |
| A2 | 69.62 | 116.5 | 92 | 267 |
| A3 | 68.64 | 122 | 110 | 267 |
| A4 | 67.63 | 123 | 68 | 257 |
| A5 | 68.45 | 65 | 42 | 141 |
| A6 | 68.68 | 477.5 | 243 | 1047 |
| A7 | 70.65 | 514 | 372 | 1237 |
| A8 | 72.29 | 360 | 272.5 | 939 |
| A9 | 70.95 | 595 | 516 | 1453 |
| A10 | 68.51 | 586.5 | 406 | 1276 |
>TRINITY_DN105465_c0_g2_i3 from sample A3 / Example spliced isoformAACCATTAATACCCTGATGTAACATCTGGAGACTGGCACGTACACAACTTTCCTTTGAGATCATGCAGTTCACCACCTGTCTCATTTGTTCCTGCAGCAGCGACGGATTCTGTCATTCTTTATCCAAAACCACCGACCCAATGAGATCTTGCCGCAGAATGTGGTCACATCTATTTTCTGCAACAAATATTCTTATAAGT
CAGAGAACAGCATTGAATTTCTTATTTGAGTGAAGATGATGAGAAAGGAGCTTAAAGATGAGAGTATAACAACTGATAAAGAAGAGCAGACGAGAGCCAAACCCATAACATATGGAGATATTTTTAGGGTGTCAGGAGAGGTGGAGAAGGAGCCCATAACCGTCAAGGATGCAGCCTTGATGCAGAGCGCAGAGACGAGG
GCTGTAGGCAACAGTCACAAAGGAGGCGCAGCGGCAATCATGCAATCAGCGGCGGAAATAAACGAGAGATTAGGTTTGGTGGATCGAAAACGCGAGACCATTGCGGCAGCAGAGGGAATGGCGGTTATAGAGACTCAGGTTCCTGGGCAGGTGCTTTGCACAGAATTTATTGCAGGTCAGCCAGTGCATTCAGAGCTCAA
GCCTGTTCCTACTCGGCATTCTGTGGCTGCCAGCGATGCCATCACAATTGGCCAGGCCCTTGAAGCTGCTGCAATAAAGAAAGGAGAAAAACCAATTGATTTAAACGATGCTCGAGCCATTCAATCTGCAGAAAAAAGGGCTACAGGCAACCCCATCACGCAAAAAGGAGGACTAGCTGCCACAGCCCAAGCGGCAGCAG
AACTTAATCCTCGAGTAAACGACGTGGGGAAGACCACTCTTTCCAACATTCTGCTGGCTGCATCTGAAGATCTTCCTGCAGACAAGGCTGTGACGAGAGAAGATGCAGAGAAGATCATGGAAGCGGAGGCTCGTGGGAGTCCTCACGGGCGACCTCAGTCTGGAGGGATTGGAGAGGTCATGCAAGCTGCAGCGGAACTG
AATGAGAAAAAGGGTATTACGCCTACTGTTCCTACCTATACATTGGAGGACGCTCTTCTCATCGATCGAATTAAATCCAGGGCTGGGGCTGAAGAGTAGGCTGATGATCATATATTGCAAATATAATTGTAAAATAATGCAATCAGAGGCATACAAATATCTAGTGCAAACAGTTCACTTAAAATAAAGTTCTCATCTAA
TTATAGATCATCTTACCCCATGGCCATCTTCTAATTATAGATCACCTTAGCCCATGGCCATGCAAATCTTGCAGAAATTTGTTTGACTGGTCAAACAGGGGCATAGTTCTTCTCTGTCCAACGAAGAAGGTTATCAAGTCCTAAGAATGTCGTCCTAAGAATGTCACTTATTCTAATTTTGTTATTAAAGAAGGTCACTT
ATGCTAATTTTGTTATGATAATAACAATTTCAGGAAGTTTCTTGTTATGATAAAAACAATTTCAGGAAGTTTCTTGAATG
>TRINITY_DN105465_c0_g2_i2 from sample A3 / Example unspliced isoform:AACCATTAATACCCTGATGTAACATCTGGAGACTGGCACGTACACAACTTTCCTTTGAGATCATGCAGTTCACCACCTGTCTCATTTGTTCCTGCAGCAGCGACGGATTCTGTCATTCTTTATCCAAAACCACCGACCCAATGAGATCTTGCCGCAGAATGTGGTCACATCTATTTTCTGCAACAAATATTCTTATAAGT
CAGAGAACAGgtaacagcagcgtcactaagttctttattcattcatatctaaacgaaggttgattgattttgagctagcattacaagactgagctcttacagagaggattattttgtggtagCATTGAATTTCTTATTTGAGTGAAGATGATGAGAAAGGAGCTTAAAGATGAGAGTATAACAACTGATAAAGAAGAGCA
GACGAGAGCCAAACCCATAACATATGGAGATATTTTTAGGGTGTCAGGAGAGGTGGAGAAGGAGCCCATAACCGTCAAGGATGCAGCCTTGATGCAGAGCGCAGAGACGAGGGCTGTAGGCAACAGTCACAAAGGAGGCGCAGCGGCAATCATGCAATCAGCGGCGGAAATAAACGAGAGATTAGGTTTGGTGGATCGAA
AACGCGAGACCATTGCGGCAGCAGAGGGAATGGCGGTTATAGAGACTCAGGTTCCTGGGCAGGTGCTTTGCACAGAATTTATTGCAGGTCAGCCAGTGCATTCAGAGCTCAAGCCTGTTCCTACTCGGCATTCTGTGGCTGCCAGCGATGCCATCACAATTGGCCAGGCCCTTGAAGCTGCTGCAATAAAGAAAGGAGAA
AAACCAATTGATTTAAACGATGCTCGAGCCATTCAATCTGCAGAAAAAAGGGCTACAGGCAACCCCATCACGCAAAAAGGAGGACTAGCTGCCACAGCCCAAGCGGCAGCAGAACTTAATCCTCGAGTAAACGACGTGGGGAAGACCACTCTTTCCAACATTCTGCTGGCTGCATCTGAAGATCTTCCTGCAGACAAGGC
TGTGACGAGAGAAGATGCAGAGAAGATCATGGAAGCGGAGGCTCGTGGGAGTCCTCACGGGCGACCTCAGTCTGGAGGGATTGGAGAGGTCATGCAAGCTGCAGCGGAACTGAATGAGAAAAAGGGTATTACGCCTACTGTTCCTACCTATACATTGGAGGACGCTCTTCTCATCGATCGAATTAAATCCAGGGCTGGGG
CTGAAGAGTAGGCTGATGATCATATATTGCAAATATAATTGTAAAATAATGCAATCAGAGGCATACAAATATCTAGTGCAAACAGTTCACTTAAAATAAAGTTCTCATCTAATTATAGATCATCTTACCCCATGGCCATCTTCTAATTATAGATCACCTTAGCCCATGGCCATGCAAATCTTGCAGAAATTTGTTTGACT
GGTCAAACAGGGGCATAGTTCTTCTCTGTCCAACGAAGAAGGTTATCAAGTCCTAAGAATGTCGTCCTAAGAATGTCACTTATTCTAATTTTGTTATTAAAGAAGGTCACTTATGCTAATTTTGTTATGATAATAACAATTTCAGGAAGTTTCTTGTTATGATAAAAACAATTTCAGGAAGTTTCTTGAATG
Intron 2 GTAACAGCAG ... TTTGTGGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 68.87 | 118 | 98 | 261 |
| A2 | 69.65 | 116.3 | 92 | 267 |
| A3 | 68.56 | 122 | 109 | 266 |
| A4 | 67.63 | 123 | 68 | 257 |
| A5 | 68.45 | 65 | 42 | 141 |
| A6 | 68.67 | 477.7 | 246 | 1047 |
| A7 | 70.65 | 514 | 375 | 1237 |
| A8 | 72.29 | 360 | 277 | 939 |
| A9 | 70.92 | 595.7 | 516.3 | 1452.7 |
| A10 | 68.5 | 586.7 | 417 | 1276 |
>TRINITY_DN105465_c0_g2_i3 from sample A3 / Example spliced isoformAACCATTAATACCCTGATGTAACATCTGGAGACTGGCACGTACACAACTTTCCTTTGAGATCATGCAGTTCACCACCTGTCTCATTTGTTCCTGCAGCAGCGACGGATTCTGTCATTCTTTATCCAAAACCACCGACCCAATGAGATCTTGCCGCAGAATGTGGTCACATCTATTTTCTGCAACAAATATTCTTATAAGT
CAGAGAACAGCATTGAATTTCTTATTTGAGTGAAGATGATGAGAAAGGAGCTTAAAGATGAGAGTATAACAACTGATAAAGAAGAGCAGACGAGAGCCAAACCCATAACATATGGAGATATTTTTAGGGTGTCAGGAGAGGTGGAGAAGGAGCCCATAACCGTCAAGGATGCAGCCTTGATGCAGAGCGCAGAGACGAGG
GCTGTAGGCAACAGTCACAAAGGAGGCGCAGCGGCAATCATGCAATCAGCGGCGGAAATAAACGAGAGATTAGGTTTGGTGGATCGAAAACGCGAGACCATTGCGGCAGCAGAGGGAATGGCGGTTATAGAGACTCAGGTTCCTGGGCAGGTGCTTTGCACAGAATTTATTGCAGGTCAGCCAGTGCATTCAGAGCTCAA
GCCTGTTCCTACTCGGCATTCTGTGGCTGCCAGCGATGCCATCACAATTGGCCAGGCCCTTGAAGCTGCTGCAATAAAGAAAGGAGAAAAACCAATTGATTTAAACGATGCTCGAGCCATTCAATCTGCAGAAAAAAGGGCTACAGGCAACCCCATCACGCAAAAAGGAGGACTAGCTGCCACAGCCCAAGCGGCAGCAG
AACTTAATCCTCGAGTAAACGACGTGGGGAAGACCACTCTTTCCAACATTCTGCTGGCTGCATCTGAAGATCTTCCTGCAGACAAGGCTGTGACGAGAGAAGATGCAGAGAAGATCATGGAAGCGGAGGCTCGTGGGAGTCCTCACGGGCGACCTCAGTCTGGAGGGATTGGAGAGGTCATGCAAGCTGCAGCGGAACTG
AATGAGAAAAAGGGTATTACGCCTACTGTTCCTACCTATACATTGGAGGACGCTCTTCTCATCGATCGAATTAAATCCAGGGCTGGGGCTGAAGAGTAGGCTGATGATCATATATTGCAAATATAATTGTAAAATAATGCAATCAGAGGCATACAAATATCTAGTGCAAACAGTTCACTTAAAATAAAGTTCTCATCTAA
TTATAGATCATCTTACCCCATGGCCATCTTCTAATTATAGATCACCTTAGCCCATGGCCATGCAAATCTTGCAGAAATTTGTTTGACTGGTCAAACAGGGGCATAGTTCTTCTCTGTCCAACGAAGAAGGTTATCAAGTCCTAAGAATGTCGTCCTAAGAATGTCACTTATTCTAATTTTGTTATTAAAGAAGGTCACTT
ATGCTAATTTTGTTATGATAATAACAATTTCAGGAAGTTTCTTGTTATGATAAAAACAATTTCAGGAAGTTTCTTGAATG
>TRINITY_DN105465_c0_g2_i1 from sample A3 / Example unspliced isoform:AACCATTAATACCCTGATGTAACATCTGGAGACTGGCACGTACACAACTTTCCTTTGAGATCATGCAGTTCACCACCTGTCTCATTTGTTCCTGCAGCAGCGACGGATTCTGTCATTCTTTATCCAAAACCACCGACCCAATGAGATCTTGCCGCAGAATGTGGTCACATCTATTTTCTGCAACAAATATTCTTATAAGT
CAGAGAACAGgtaacagcagcgtttattcattcatatctaaacgaaggttgattgattttgagctagcattacaagactgagctcttacagagaggattattttgtggtagCATTGAATTTCTTATTTGAGTGAAGATGATGAGAAAGGAGCTTAAAGATGAGAGTATAACAACTGATAAAGAAGAGCAGACGAGAGCCA
AACCCATAACATATGGAGATATTTTTAGGGTGTCAGGAGAGGTGGAGAAGGAGCCCATAACCGTCAAGGATGCAGCCTTGATGCAGAGCGCAGAGACGAGGGCTGTAGGCAACAGTCACAAAGGAGGCGCAGCGGCAATCATGCAATCAGCGGCGGAAATAAACGAGAGATTAGGTTTGGTGGATCGAAAACGCGAGACC
ATTGCGGCAGCAGAGGGAATGGCGGTTATAGAGACTCAGGTTCCTGGGCAGGTGCTTTGCACAGAATTTATTGCAGGTCAGCCAGTGCATTCAGAGCTCAAGCCTGTTCCTACTCGGCATTCTGTGGCTGCCAGCGATGCCATCACAATTGGCCAGGCCCTTGAAGCTGCTGCAATAAAGAAAGGAGAAAAACCAATTGA
TTTAAACGATGCTCGAGCCATTCAATCTGCAGAAAAAAGGGCTACAGGCAACCCCATCACGCAAAAAGGAGGACTAGCTGCCACAGCCCAAGCGGCAGCAGAACTTAATCCTCGAGTAAACGACGTGGGGAAGACCACTCTTTCCAACATTCTGCTGGCTGCATCTGAAGATCTTCCTGCAGACAAGGCTGTGACGAGAG
AAGATGCAGAGAAGATCATGGAAGCGGAGGCTCGTGGGAGTCCTCACGGGCGACCTCAGTCTGGAGGGATTGGAGAGGTCATGCAAGCTGCAGCGGAACTGAATGAGAAAAAGGGTATTACGCCTACTGTTCCTACCTATACATTGGAGGACGCTCTTCTCATCGATCGAATTAAATCCAGGGCTGGGGCTGAAGAGTAG
GCTGATGATCATATATTGCAAATATAATTGTAAAATAATGCAATCAGAGGCATACAAATATCTAGTGCAAACAGTTCACTTAAAATAAAGTTCTCATCTAATTATAGATCATCTTACCCCATGGCCATCTTCTAATTATAGATCACCTTAGCCCATGGCCATGCAAATCTTGCAGAAATTTGTTTGACTGGTCAAACAGG
GGCATAGTTCTTCTCTGTCCAACGAAGAAGGTTATCAAGTCCTAAGAATGTCGTCCTAAGAATGTCACTTATTCTAATTTTGTTATTAAAGAAGGTCACTTATGCTAATTTTGTTATGATAATAACAATTTCAGGAAGTTTCTTGTTATGATAAAAACAATTTCAGGAAGTTTCTTGAATG
Intron 3 GTATATTATA ... GTCTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 24.1 | 211 | 0 | 67 |
| A2 | 17.54 | 188 | 0 | 40 |
| A3 | 20.67 | 238 | 0 | 62 |
| A4 | 20.08 | 203 | 0 | 51 |
| A5 | 21.85 | 93 | 0 | 26 |
| A6 | 24.38 | 1098 | 0 | 354 |
| A7 | 24.05 | 1134 | 0 | 359 |
| A8 | 24.42 | 1393 | 2 | 450 |
| A9 | 23.58 | 1413 | 0 | 436 |
| A10 | 22.67 | 1095 | 2 | 321 |
>TRINITY_DN40392_c1_g1_i8 from sample A8 / Example spliced isoformTCACCACCTGTCTCATTTGTTCCTGCAGCAGCGACGGATTCTGTCATTCTTTATCCAAAACCACCGACCCAATGAGATCTTGCCGCAGAATGTGGTCACATCTATTTTCTGCAACAAATATTCTTATAAGTCAGAGAACAGGTAACAGCAGCGTTTATTCATTCATATCTAAACGAAGGTTGATTGATTTTGAGCTAGCA
TTACCAGACTGAGCTCTTACAGAGAGGATTATTTTGTGGTAGCATTGAATTTCTTATTTGAGTGAAGATGATGAGAAAGGAGCTTAAAGATGAGAGTATAACAACTGATAAAGAAGAGCAGACGAGAGCCAAACCCATAACATATGGAGATATTTTTAGGGTGTCAGGAGAGGTGGAGAAGGAGCCCATAACCGTCAAGG
ATGCAGCCTTGATGCAGAGCGCAGAGACGAGGGCTGTAGGCAACAGCCACAAAGGAGGCGCAGCGGCAATCATGCAATCAGCGGCGGAAATAAACGAGAGATTAGGTTTGGTGGATCGAAAACGCGAGACCATTGCGGCAGCAGAGGGAATGGCGGTTATAGAGACTCAGGTTCCTGGGCAGGTGCTTTGCACAGAATTT
ATTGCAGGTCAGCCAGTGCATTCAGAGCTCAAGCCTGTTCCTACTCGGCATTCTGTGGCTGCCAGCGATGCCATCACAATTGGCCGTTCAATTAAAATAAATTTCTCATCTAATTAGTATAGATCCATCTTAGCCCATGGCTTCTTAACAAAATGGGATTTTCTGGACTGTATAATTCAGTGGACTGTGTAATGCAATCA
GAGACATACAAATTAACAAAATGGGATTTTCTGGACTGTATAATTCAGTGGACTGTGTAATGCAATCAGAGACATACAAATATCTAGTGCAAACAGTTCAATTAAAATAAAGTAGGCCCTTGAAGCTGCTGCAATAAAGAAAGGAGAAAAACCAATTGATTTAAACGATGCTCGAGCCATTCAATCTGCAGAAAAAAGGG
CTACAGGCAACCCCATCACGCAAAAAGGAGGACTAGCTGCCACAGCCCAAGCGGCAGCAGAACTTAATCCTCGAGTAAACGACGTGGGGAAGACCACTCTTTCCAACATTCTGCTGGCTGCATCTGAAGATCTTCCTGCAGACAAGGCTGTGACGAGAGAAGATGCAGAGAAGATCATGGAAGCGGAGGCTCGTGGGAGT
CCTCACGGGCGACCTCAGTCTGGAGGGATTGGAGAGGTCATGCAAGCTGCAGCGGAACTGAATGAGAAAAAGGGTATTACGCCTACTGTTCCTACCTATACATTGGAGGACGCTCTTCTCATCGATCGAATTAAATCCAGGGCTGGGGCTGAAGAGTAGGCTGATGATCATATATTGCAAATATAATTGTAAAATAATGC
AATCAGAGGCATACAAATATCTAGTGCAAACAGTTCACTTAAAATAAAGTTCTCATCTAATTATAGATCATCTTACCCCATGGCCATCTTCTAATTATAGATCACCTTAGCCCATGGCCATGCAAATCTTGCAGAAATTTGTTTGACTGGTCAAACAGGGGCATAGTTCTTCTCTGTCCAACGAAGAAGGTTATCAAGTC
CTAAGAATGTCGTCCTAAGAATGTCACTTATTCTAATTTCAGGAAGTTTCTTGAATGTCACTTATGCTAATTTTGTTATGATAATAACAATTTCAGGAAGTTTCTTGTTATGATAAAAACAATTTCAGGAAGTTTCTTGAATGTCACTTATGCTAATTTTGTTATGATAATAACAATTTGAGGAAGTTTCTTTTTACAAA
TATATCGAAATTGATTTTCATCACAGAACACTAACTAGAACACTAGAACTATAGTATCAGAAATCTGGAAAGCTTATTTTGGTTTTGAAAACAATTTAAATTGACAAAAACAATTGTAAATTGACATAGAACTAGAGTATCAGAAATCTGGAAAGCC
>TRINITY_DN40392_c1_g1_i5 from sample A8 / Example unspliced isoform:CACTCTTTCCAACATTCTGCTGgtatattatattgtaccctttgccatacaacttcatatcattgactccatgagagaaccatgcagaagatttcttttatttatgtattgggttgagtcacattaagtttttctgcatatattttgatttgttttgatttgtttctatgtaactctgtgtctgtgcagGCTGCATCTGA
AGATCTTCCTGCAGACAAGGCTGTGACGAGAGAAGATGCAGAGAAGATCATGGAAGCGGAGGCTCGTGGGAGTCCTCACGGGCGACCTCAGTCTGGAGGGATTGGAGAGGTCATGCAAGCTGCAGCGGAACTGAATGAGAAAAAGGGTATTACGCCTACTGTTCCTACCTATACATTGGAGGACGCTCTTCTCATCGATC
GAATTAAATCCAGGGCTGGGGCTGAAGAGTAGGCTGATGATCATATATTGCAAATATAATTGTAAAATAATGCAATCAGAGGCATACAAATATCTAGTGCAAACAGTTCACTTAAAATAAAGTTCTCATCTAATTATAGATCATCTTACCCCATGGCCATCTTCTAATTATAGATCACCTTAGCCCATGGCCATGCAAAT
CTTGCAGAAATTTGTTTGACTGGTCAAACAGGGGCATAGTTCTTCTCTGTCCAACGAAGAAGGTTATCAAGTCCTAAGAATGTCGTCCTAAGAATGTCACTTATTCTAATTTCAGGAAGTTTCTTGAATGTCACTTATGCTAATTTTGTTATGATAATAACAATTTCAGGAAGTTTCTTGTTATGATAAAAACAATTTCA
GGAAGTTTCTTGAATGTCACTTATGCTAATTTTGTTATGATAATAACAATTTGAGGAAGTTTCTTTTTACAAATATATCGAAATTGATTTTCATCACAGAACACTAACTAGAACACTAGAACTATAGTATCAGAAATCTGGAAAGCTTATTTTGGTTTTGAAAACAATTTAAATTGACAAAAACAATTGTAAATTGACAT
AGAACTAGAGTATCAGAAATCTGGAAAGCC