sp|Q9C6I6|ETFA_ARATH ----> Electron transfer flavoprotein subunit alpha, mitochondrial
Intron 1 GTTGGTCAAA ... CATATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 60.81 | 29 | 41 | 49 |
| A2 | 64.49 | 19 | 46 | 23 |
| A3 | 66.67 | 17 | 30 | 38 |
| A4 | 74.74 | 12 | 20 | 51 |
| A5 | 69.57 | 7 | 18 | 14 |
| A6 | 67.58 | 107 | 169 | 277 |
| A7 | 68.84 | 86 | 194 | 186 |
| A8 | 68.5 | 117 | 198 | 311 |
| A9 | 66.55 | 98 | 173 | 217 |
| A10 | 69.51 | 59 | 119 | 150 |
>TRINITY_DN101113_c0_g1_i2 from sample A5 / Example spliced isoformTTTCTGTTTAAGCTAGAGGTTTGAATATAGTATTTCTGTTTAAGCTAGAGGTTTGAATATAGTATTTCTGTTTAAGCTAGAGGTTTGCAAAATGTTTTTTTATTTTTATTTTTTCGGTTTATGCACAGTAATTCCGGGTTAAGGTGGATCTCGTTGATTCCAAGATCCCGAATAGTGTTTTAATTCAATTTGAATCGATA
TCTATGAATTCAATTTCGAACCTGGGGAGACAACGTATTCCTTACGCTGCTGCGCCTATCGCAGCTAAGCAACAAGCAAAACAATAGAGAGCGGGTTTCTCCCTGATGGTTATTTGATAACATTGAAATTGCATTTCAGGCATAGGAGGACATGGCGTCTACAATGGCATTGTTCAAGTCACTGCGACGAGGAGTGTCTC
GTCTTCAGTCGCATTCCATCGGTTTTTACAACACAAGAAGATCTTTAAGGACATTGATTTTGGCTGAACATGAGGGGGGTTCTGTTAAAGAATCGTCAATGAATGCCATAGCAGCTGCACAAGCATTAGGTAAAGAGACTCCTGTTTCACTTTTGATGGCTGGTTCTGGACCGTCCCTCCATGCTGCAGCTACTCAGGCA
GCCTCAAGTTATCCATCAGTTTCTCAGGTGTTTATTGCAGATTCAGAGAAATTTGAACATCCATTAGCTGAACCCTGGGCTGAGCTGATCCGATTAGTTCAACAGAATGGCTCTTATTCACATATAATTGCCGCCTCAACTTCTTTTGGAAAAAATGTAATGCCACGAGCTGCAGCTCTGTTGGATGTTTCTCCTGTTTC
AGATATCACACAGATTATTGGGGATCAAACATTTGTCAGGCCAATCTATGCTGGAAATGCTCTCTGTACTGTTCGTTATGTTGGGTCAGGTCCCTGCATGATGAGCATTAGGCCAACATCATTCCCAGTTTCTTTTTCATTAGACAAGTCAAATGTGGATGCAGCTCCAATTTCAACCATTGATGTCTCAAACTTAGATG
CAGAGCCTGTTGGGAAGTCAACTTGGTTGAAACAAACATCACAGGAAGCTGAACGACCAGACTTGAGTAGTGCATGCATTGTTGTCACAGGAGGTCGAGGACTCAAGAATGCAGAGAATTTCAAAATGATAGAAAAGCTTGCTGATAAAATAGGTGCAGCTGTGGGTGCTACAAGGGCTGCTGTGGATGCTGGATATGTC
CCAAATGAACTTCAGGTTGCTGATTATGGGCTAGCAGCAGATCTGTTTGAAGTGATCCCGGAGCTCTTAGAAAAGCTTCCAGAAAAAAAGTGACCTCCCATTCAATTGTATTATGTTTCTTCTGTGCTTTCATTTGCATTTAGAGTGTTCATGAAGAAGACACTGCAGGTTCATTTGTTTGATGCAATAAAGAGCCTCGG
AAGACTAGGTTCCAACTATTGCTCTGTATTGTGAATGATCTCAAAGTATACATCATAATAAAGATTCCATCTCACATTCGTTATTGATCTGTGTATAGCAAGGCAACCACTTGCAGATATAAATAAATTTATTGCATTTTCACTAAAAAGGAAAGGGAAACTATGTCAATTATTCGCAAATGAACCAAAAACAGTTCATT
GAATTGCCGAAGTATGAGCTGGTGTAACATTTTAACCCGAAGGAACTAAATGTAGA
>TRINITY_DN101113_c0_g1_i3 from sample A5 / Example unspliced isoform:TTTCTGTTTAAGCTAGAGGTTTGAATATAGTATTTCTGTTTAAGCTAGAGGTTTGAATATAGTATTTCTGTTTAAGCTAGAGGTTTGCAAAATGTTTTTTTATTTTTATTTTTTCGGTTTATGCACAGTAATTCCGGGTTAAGGTGGATCTCGTTGATTCCAAGATCCCGAATAGTGTTTTAATTCAATTTGAATCGATA
TCTATGAATTCAATTTCGAACCTGGGGAGACAACGTATTCCTTACGCTGCTGCGCCTATCGCAGCTAAGCAACAAGCAAAACAATAGAGAGCGGGTTTCTCCCTGATGGTTATTTGATAACATTGAAATTGCATTTCAGGCATAGGAGGACATGGCGTCTACAATGGCATTGTTCAAGTCACTGCGACGAGGAGTGTCTC
GTCTTCAGTCGCATTCCATCGGTTTTTACAACACAAGAAGATCTTTAAGGACATTGATTTTGGCTGAACATGAGGGGGGTTCTGTTAAAGAATCGTCAATGAATGCCATAGCAGCTGCACAAGCATTAGGTAAAGAGACTCCTGTTTCACTTTTGATGGCTGGTTCTGGACCGTCCCTCCATGCTGCAGCTACTCAGGCA
GCCTCAAGTTATCCATCAGTTTCTCAGGTGTTTATTGCAGATTCAGAGAAATTTGAACATCCATTAGCTGAACCCTGGGCTGAGCTGATCCGATTAGTTCAACAGAATGGCTCTTATTCACATATAATTGCCGCCTCAACTTCTTTTGGAAAAAATGTAATGCCACGAGCTGCAGCTCTGTTGGATGTTTCTCCTGTTTC
AGATATCACACAGATTATTGGGGATCAAACATTTGTCAGGCCAATCTATGCTGGAAATGCTCTCTGTACTGTTCGTTATGTTGGGTCAGGTCCCTGCATGATGAGCATTAGGCCAACATCATTCCCAGTTTCTTTTTCATTAGACAAGTCAAATGTGGATGCAGCTCCAATTTCAACCATTGATGTCTCAAACTTAGATG
CAGAGCCTGTTGGGAAGTCAACTTGGTTGAAACAAACATCACAGGAAGCTGAACGACCAGACTTGAGTAGTGCATGCATTGTTGTCACAGGAGGTCGAGGACTCAAGAATGCAGAGAATTTCAAAATGATAGAAAAGCTTGCTGATAAAATAGGTGCAGCTGTGGGTGCTACAAGGGCTGCTGTGGATGCTGGATATGTC
CCAAATGAACTTCAGgttggtcaaactgggaaaattgtcgcaccgcagctttatattgcttttggtgtgtcaggggcaattcaacatcttgcaggcatgaaagactccaaagtgattgtagctataaataaagatgctgatgctcccatatttcagGTTGCTGATTATGGGCTAGCAGCAGATCTGTTTGAAGTGATCCC
GGAGCTCTTAGAAAAGCTTCCAGAAAAAAAGTGACCTCCCATTCAATTGTATTATGTTTCTTCTGTGCTTTCATTTGCATTTAGAGTGTTCATGAAGAAGACACTGCAGGTTCATTTGTTTGATGCAATAAAGAGCCTCGGAAGACTAGGTTCCAACTATTGCTCTGTATTGTGAATGATCTCAAAGTATACATCATAAT
AAAGATTCCATCTCACATTCGTTATTGATCTGTGTATAGCAAGGCAACCACTTGCAGATATAAATAAATTTATTGCATTTTCACTAAAAAGGAAAGGGAAACTATGTCAATTATTCGCAAATGAACCAAAAACAGTTCATTGAATTGCCGAAGTATGAGCTGGTGTAACATTTTAACCCGAAGGAACTAAATGTAGA
Intron 2 GTTTGTTTCT ... CGAATTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.14 | 56.5 | 27 | 13 |
| A2 | 24.71 | 32 | 17 | 4 |
| A3 | 17.54 | 47 | 15 | 5 |
| A4 | 30.56 | 25 | 10 | 12 |
| A5 | 26.32 | 14 | 7 | 3 |
| A6 | 17.76 | 113.5 | 29 | 20 |
| A7 | 19.11 | 127 | 38 | 22 |
| A8 | 21.51 | 104 | 31 | 26 |
| A9 | 23.46 | 137 | 54 | 30 |
| A10 | 18.59 | 127 | 44 | 14 |
>TRINITY_DN115380_c0_g1_i1 from sample A1 / Example spliced isoformTTTCTGTTTAAGCTAGAGGTTTGAATATAGTATTTCTGTTTAAGCTAGAGGTTTGAATATAGTATTTCTGTTTAAGCTAGAGGTTTGCAAAATGTTTTTTTATTTTTATTTTTTCGGTTTATGCACAGTAATTCCGGGTTAAGGTGGATCTCGTTGATTCCAAGATCCCGAATAGTGTTTTAATTCAATTTGAATCGATA
TCTATGAATTCAATTTCGAACCTGGGGAGACAACGTATTCCTTACGCTGCTGCGCCTATCGCAGCTAAGCAACAAGCAAAACAATAGAGAGCGGGTTTCTCCCTGATGGTTATTTGATAACATTGAAATTGCATTTCAGGCATAGGAGGACATGGCGTCTACAATGGCATTGTTCAAGTCACTGCGACGAGGAGTGTCTC
GTCTTCAGTCGCATTCCATCGGTTTTTACAACACAAGAAGATCTTTAAGGACATTGATTTTGGCTGAACATGAGGGGGGTTCTGTTAAAGAATCGTCAATGAATGCCATAGCAGCTGCACAAGCATTAGGTAAAGAGACTCCTGTTTCACTTTTGATGGCTGGTTCTGGACCGTCCCTCCATGCTGCAGCTACTCAGGCA
GCCTCAAGTTATCCATCAGTTTCTCAGGTGTTTATTGCAGATTCAGAGAAATTTGAACATCCATTAGCTGAACCCTGGGCTGAGCTGATCCGATTAGTTCAACAGAATGGCTCTTATTCACATATAATTGCCGCCTCAACTTCTTTTGGAAAAAATGTAATGCCACGAGCTGCAGCTCTGTTGGATGTTTCTCCTGTTTC
AGATATCACACAGATTATTGGGGATCAAACATTTGTCAGGCCAATCTATGCTGGAAATGCTCTCTGTACTGTTCGTTATGTTGGGTCAGGTCCCTGCATGATGAGCATTAGGCCAACATCATTCCCAGTTTCTTTTTCATTAGACAAGTCAAATGTGGATGCAGCTCCAATTTCAACCATTGATGTCTCAAACTTAGATG
CAGAGCCTGTTGGGAAGTCAACTTGGTTGAAACAAACATCACAGGAAGCTGAACGACCAGACTTGAGTAGTGCATGCATTGTTGTCACAGGAGGTCGAGGACTCAAGAATGCAGAGAATTTCAAAATGATAGAAAAGCTTGCTGATAAAATAGGTGCAGCTGTGGGTGCTACAAGGGCTGCTGTGGATGCTGGATATGTC
CCAAATGAACTTCAGGTTGGTCAAACTGGGAAAATTGTCGCACCGCAGCTTTATATTGCTTTTGGTGTGTCAGGGGCAATTCAACATCTTGCAGGCATGAAAGACTCCAAAGTGATTGTAGCTATAAATAAAGATGCTGATGCTCCCATATTTCAGGTGAGTGATCCAGTTCACAGTTCAGAAGTTTTATTTTTTCTAGT
ACCTATATTTGTAGTTGAAATTCAGTAGCTGAAGGTGTAGTTGGAGTTTGAGTGTCTCCGAAGTATTAGCTTATATTTATCCTGCTTCAAAAGACATGTGATGAACACTTAAAGCTGTAAATTAGGGGAAACTAGAAAGAGGAGCAAAAATTAAGGTTATTGATACCATGTAATGTTTTCCATACGTTCGAGATAGATGT
TCTTGCAACATTACAAATGGAAAATGGAATCATGAGTTTGGCTGTGCACGAAGGAGCAGTGGATTGAAGAAACTGGAATCTTATGGTCACTGTTTGCAACATGGTATGACCTGCCATTCTCTGGAGTCTGCAGGATGGAAACAAAACATAATACTTTCATAGGAATAGTCTTCAGGAATCATGCATGTCTATGTTGATCA
AGTATTGCATATTTCATGATGCACAGAAATTTGTTCAACATGATCCCCTCTGCATAGATATATAGAACTATAGCTTCATTAGAAGATGAGAGGAGCAGATAATAGACAATAAACTAGAGACTTATTAATAACTGATAGGGCTACAATGGAGTAAATCTGGCAGCCCAGGTCGGCCCCTTGCAGAGATTCTCTTTTCTGAT
CAGACTCCTAATACCACCTTCAAAAATATTCAATGTCATAACTTGCAGGGAATAGACCCAGTACACTTCCACATCCTGTCCACTGGCAATCGAAATTGTTTGATAGATATTTTAGTGCCTGATAGGGTCCTCATTTTTTATGCTGCT
>TRINITY_DN115380_c0_g1_i4 from sample A1 / Example unspliced isoform:GTACGAAGATATGGCATTGAATTTGGAAAAGCAATAATACTTTGGGACTTGTGAATATAGATTTGGAAAGTCTTTTGAAACAGAATATGCCTTTTCGTTTTCTTAACTTTACTTCATTCTTTCCTTCAGGCCAATCTATGCTGGAAATGCTCTCTGTACTGTTCGTTATGTTGGGTCAGGTCCCTGCATGATGAGCATTA
GGCCAACATCATTCCCAGTTTCTTTTTCATTAGACAAGTCAAATGTGGATGCAGCTCCAATTTCAACCATTGATGTCTCAAACTTAGATGCAGgtttgtttcttaatgcatattcacgaggtaaggagaacacatcttatttgcatctaaagacatgattttcaccctatcatttacgtggcatctgaaattcagatgtt
caactgttctgctggggataaattctttgacgtagataatatatcctgcttaaccctggtcacatgttgcagtctgtatgtgaattgtcaacggtattgttagtgatttcttatttatttactgaagtaatcctctctatggagctcttgatgggtacaaagttttgtattttgttactggtttgaggcttagcagttac
aacacagatgttattctacctacatcgtgattatgtttactactcgaattacagAGCCTGTTGGGAAGTCAACTTGGTTGAAACAAACATCACAGGAAGCTGAACGACCAGACTTGAGTAGTGCATGCATTGTTGTCACAGGAGGTCGAGGACTCAAGAATGCAGAGAATTTCAAAATGATAGAAAAGCTTGCTGATAAA
ATAGGTGCAGCTGGTATGATTATCTTCATCTGTTTCCTTCTCGAACTCTATTTCATCAACTCTTCTCAATAAAAGGTTTTTTTGGGTGCTATATCTGAGCTATCTGTGTTTGTGATTTCTCTCGATGGACACACCAGCATAAATGCATATCCTCAAACTGCGATAGAGGGAGAGTTCACCTTGTTAAATCTAAAACCCTA
ATGGATAGGTTCTTGATATGGCGTATCTATTTTTGAATCAACATTTTTAATTTTTGTAAGAGTGAGCAGAGCATTATATCTATACATACAAAACTAGGTTACAGATGTGCTGAGA