sp|Q5KS41|WSD11_ARATH ----> Wax ester synthase/diacylglycerol acyltransferase 11
Intron 1 GTACCGCATT ... ATAATTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.98 | 22 | 3 | 6 |
| A2 | 18.18 | 18 | 6 | 2 |
| A3 | 15.79 | 24 | 8 | 1 |
| A4 | 20 | 8 | 1 | 3 |
| A5 | 39.13 | 7 | 5 | 4 |
| A6 | 19.32 | 71 | 10 | 24 |
| A7 | 20.7 | 90 | 32 | 15 |
| A8 | 22.01 | 62 | 17 | 18 |
| A9 | 17.53 | 80 | 20 | 14 |
| A10 | 17.97 | 89 | 23 | 16 |
>TRINITY_DN101345_c0_g1_i1 from sample A5 / Example spliced isoformCAGGCGAGTGCCAGCGGAAGAATGGATTCATGGGGTCATCTCCATACCAAGCCCTCTCTCAGGAGAGTTGCAGTGAAAAATGATAACAAATTCAGGGAGCAGGAGCAGGAGCAGGAAGACTGGGAGGGATTGGAACCCGTGACCCCTGCAGGTCGCCTCTTTAACCAACCCTCTCTAAATTGTTACGTTCTTGTTATTGT
AGGATTCACGACACACATGGACGTGGAAGCTTTAAAAGCAGGTCTGGAGGCGACTTTGATCAAACACAAGCGCTTCTCCAGTATTGTGAAAGAAGATACATGCGGGGTTTTGAAATGGATGCCAGTCGATGTCAATATAGATGATCATGTTATACTCCCGTTTATCGACCCTGCAGACAATTTTAATCGGGATTTCGTAA
AGAAATATACAGCCAAACTGGCCACGGCCCCTTCTCTGCATCCCTCCAGGCCGTTGTGGCAATTTCATCTTCTACACGTTAGGTCCGACGATGCAGCCTGCAGCTTGGTGTTGCGAATACATCATTCCTTGGGGGACGGAATCTCTCTAATGTCGCTCTTCTTGGCCTGTACCAGAAAGGCCACCGACTCTCAATCCCTT
CCCACAATCCCACACCAAACTTCAACAAGGCCGATTGATGGCCGAGGAAGCTGTAAGGAAATATTGCATGTTCGGGTTCTGATCATGTCTCTCTACAATCTTTTCCTTGTAATCTGGTACACTATTGTGGACATGATGCATTTTTTAGGGACAATTATATGGATTAAGGACAGCGATACGCCAATTAAGGGTTATCCAGG
CGTAGAATCAAGCCCTAAGCAGATCGAACACGTGACCCTCAGTCTGGAAGATTTCAAGATTGTCAAGACTGCCGTAAACGGGACGGTAAACGATGTCATGTTGGGGATGACTTCAGCAGGGATCCTGCGGTATTTGGAACGCGAATACGAGGCCAAGGCCGAGGAAATCTCAAAATCAGAAGACAAGAAATTTGGTGGTA
AACAGAGCCTTCCATCGAATCTGCGCGTGCGATCAACAATTTTAGTGAATACAAGACCTGCTCCAGGACTTCATGATCTGGCCGACATGATGAAATCCGGTAAGAGTGGAAGAGCCAGGTGGGGGAATAATGTAGGTTATTTGATTCTTCGGTTTCCCATGGTGAAGCAGCAGAACCCTCTGGATTATGCTCGAGCGGCA
ACTGCCCTGATAAGGAAAAAGAAATTATCTCTGGAGGCACCTTTTACTTATGCCAGTGCGAAACTACTGATTAAGCTTGCAGGTGTCAAGGTGTCTACCGCTGTGACACACAGAATGATCGCAAACACCAGTATTTCATTCTCCAACATTGTTGGGCCAGCGGAGGAGGTGGAATTTTTCGGTCACCCAATCGTTCATCT
GATTCCAACGGTGTCTGGACACCCTCATTCACTAACAATACACTTTCAAAGTTACATGGGAAGAGTGACATTGGTGGTAACTGCGGCATCGGAAGTGGTAAGGGATCCGAAACAGCTGTGCATCGATTGCGAAGAAGCTTTCCACAGCATGAAGCAGGCGGCCATTGCAAGCAATCGACACGCCATCTGATCTGTCAGGA
GGATCTGATAGAAATGTAAATGCAGAGGCACATCAGCCTGTAACGTTCAAGGAATCAAGTACAGTCTACCTGAATCACCCAGTTTGAAGAGGGCATGGCGTCTAGGTACTTATGTATATATAATAAAGAGAAGATAATCTTGCGTGGTGGAACTTCCAATGTTCGAGTGGAGTGTGGTACTGCTTGTCAGCTTTGATTCA
CTCTTCATTAATTTCAATGGAAGGATTTGACAAAATGTTGACACTCATCACTGATCAGGTATGGTTTATCTTGACACTCATCACTGGTGGAGGGTCGGCTGTTTTTTGAATTCTGGGATGCTGATATCCTTCGGGAATCTGGCAGCTACTTATTTTATGTTTTTTGAATTTTGGGATGTTGATATCCTTCGGGAATCTGG
TAGCTACTTATTGTATGGTCCGTGATATGTTTTGATGTTTTTTTTGGGTTTGGTGACTATTGTGGCTGGTTGCCGTGGTATTTATTTGCTTTATCAGTTTTTAGTTTTGTTTGTATACCCTCACTGTATTGTCTGTTGTGTCTATTGGGAGGTTTTCTTCTTCTTGCCCAGGGGCTGTTCCTATTTTCTACTTTTTGGTT
GGCCTGGAT
>TRINITY_DN101345_c0_g1_i3 from sample A5 / Example unspliced isoform:CAGGCGAGTGCCAGCGGAAGAATGGATTCATGGGGTCATCTCCATACCAAGCCCTCTCTCAGGAGAGTTGCAGTGAAAAATGATAACAAATTCAGGGAGCAGGAGCAGGAGCAGGAAGACTGGGAGGGATTGGAACCCGTGACCCCTGCAGGTCGCCTCTTTAACCAACCCTCTCTAAATTGTTACGTTCTTGTTATTGT
AGGATTCACGACACACATGGACGTGGAAGCTTTAAAAGCAGGTCTGGAGGCGACTTTGATCAAACACAAGCGCTTCTCCAGTATTGTGAAAGAAGATACATGCGGGGTTTTGAAATGGATGCCAGTCGATGTCAATATAGATGATCATGTTATACTCCCGTTTATCGACCCTGCAGACAATTTTAATCGGGATTTCGTAA
AGAAATATACAGCCAAACTGGCCACGGCCCCTTCTCTGCATCCCTCCAGGCCGTTGTGGCAATTTCATCTTCTACACGTTAGGTCCGACGATGCAGCCTGCAGCTTGGTGTTGCGAATACATCATTCCTTGGGGGACGGAATCTCTCTAATGTCGCTCTTCTTGGCCTGTACCAGAAAGGCCACCGACTCTCAATCCCTT
CCCACAATCCCACACCAAACTTCAACAAGGCCGATTGATGGCCGAGGAAGCTGTAAGGAAATATTGCATGTTCGGGTTCTGATCATGTCTCTCTACAATCTTTTCCTTGTAATCTGGTACACTATTGTGGACATGATGCATTTTTTAGGGACAATTATATGGATTAAGGACAGCGATACGCCAATTAAGGGTTATCCAGG
CGTAGAATCAAGCCCTAAGCAGATCGAACACGTGACCCTCAGTCTGGAAGATTTCAAGATTGTCAAGACTGCCGTAAACGGGACGGTAAACGATGTCATGTTGGGGATGACTTCAGCAGGGATCCTGCGGTATTTGGAACGCGAATACGAGGCCAAGGCCGAGGAAATCTCAAAATCAGAAGACAAGAAATTTGGTGGTA
AACAGAGCCTTCCATCGAATCTGCGCGTGCGATCAACAATTTTAGTGAATACAAGACCTGCTCCAGGACTTCATgtaccgcatttttcttcgcctcctaattgctacaattacagtttcttgctttccaagaattatagaatcttgcaaacccgctgtgacttctcacaagttatttagaatatatgtattgtggacgca
gtctgcggctgacatcaaagcttcttgttgcgatttgctataattgcagGATCTGGCCGACATGATGAAATCCGGTAAGAGTGGAAGAGCCAGGTGGGGGAATAATGTAGGTTATTTGATTCTTCGGTTTCCCATGGTGAAGCAGCAGAACCCTCTGGATTATGCTCGAGCGGCAACTGCCCTGATAAGGAAAAAGAAAT
TATCTCTGGAGGCACCTTTTACTTATGCCAGTGCGAAACTACTGATTAAGCTTGCAGGTGTCAAGGTGTCTACCGCTGTGACACACAGAATGATCGCAAACACCAGTATTTCATTCTCCAACATTGTTGGGCCAGCGGAGGAGGTGGAATTTTTCGGTCACCCAATCGTTCATCTGATTCCAACGGTGTCTGGACACCCT
CATTCACTAACAATACACTTTCAAAGTTACATGGGAAGAGTGACATTGGTGGTAACTGCGGCATCGGAAGTGGTAAGGGATCCGAAACAGCTGTGCATCGATTGCGAAGAAGCTTTCCACAGCATGAAGCAGGCGGCCATTGCAAGCAATCGACACGCCATCTGATCTGTCAGGAGGATCTGATAGAAATGTAAATGCAG
AGGCACATCAGCCTGTAACGTTCAAGGAATCAAGTACAGTCTACCTGAATCACCCAGTTTGAAGAGGGCATGGCGTCTAGGTACTTATGTATATATAATAAAGAGAAGATAATCTTGCGTGGTGGAACTTCCAATGTTCGAGTGGAGTGTGGTACTGCTTGTCAGCTTTGATTCACTCTTCATTAATTTCAATGGAAGGA
TTTGACAAAATGTTGACACTCATCACTGATCAGGTATGGTTTATCTTGACACTCATCACTGGTGGAGGGTCGGCTGTTTTTTGAATTCTGGGATGCTGATATCCTTCGGGAATCTGGCAGCTACTTATTTTATGTTTTTTGAATTTTGGGATGTTGATATCCTTCGGGAATCTGGTAGCTACTTATTGTATGGTCCGTGA
TATGTTTTGATGTTTTTTTTGGGTTTGGTGACTATTGTGGCTGGTTGCCGTGGTATTTATTTGCTTTATCAGTTTTTAGTTTTGTTTGTATACCCTCACTGTATTGTCTGTTGTGTCTATTGGGAGGTTTTCTTCTTCTTGCCCAGGGGCTGTTCCTATTTTCTACTTTTTGGTTGGCCTGGAT
Intron 2 GTAAGTATGG ... AGAAACACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 25.71 | 26 | 9 | 4.3 |
| A2 | 30.02 | 11.7 | 5 | 0.3 |
| A3 | 21.05 | 15 | 4 | 5 |
| A4 | 40.46 | 17.7 | 12 | 2.7 |
| A5 | 14.29 | 12 | 2 | 3 |
| A6 | 21.74 | 36 | 10 | 4.3 |
| A7 | 27.04 | 56.7 | 21 | 6.3 |
| A8 | 27.89 | 45.7 | 17.7 | 9.7 |
| A9 | 14.46 | 47.3 | 8 | 4.7 |
| A10 | 32.12 | 50 | 23.7 | 8.3 |
>TRINITY_DN47062_c0_g1_i5 from sample A7 / Example spliced isoformCCTGGAGTCTTGCTATGTGTTGATACTATGATAGTTGCACTGCCCGAAGAATTATGTGAAGGCCAGTGCAGGGCGCCAGTCCCGATCCTTCATTTATGTATTTTCCCTGGAGCGGCAAAAGCTTTCAATCCCAGAAATTCTTATTACAGTCCAACCATTAATTAATCTTTAATAAAGACCACGTACATTGCATCCCCCAA
GCTTTCTCAGTACTTTCAATTTAACTTGAGTCTCAAGCAATCATAAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGCCAACGCCAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGTCAACGCCAGAGGAAGAATGGATTCATGGACCCATCTCCATGTCAAGCCCGCTCTCAGG
AGAGTTGCAGTGAAAAATGATAACAGATTCAGGGAACAGGAGCAGGAAAACTGGGAGGGATTGGAACCCGTGACCCCTGCAGGTCGCCTCTTTAACCAACCCTCTCTAAATTGTTACGTTCTTGTTATTGTAGGATTCACGACACACATGGACGTGGAAGCTTTAAAAGCAGGTCTGGAGGCGACTTTGATCAAACACAA
GCGCTTCTCCAGTATTGTGAAAGAAGATACATGCGGGGTTTTGAAATGGATGCCAGTCGATGTCAATATAGATGATCATGTTATACTCCCGTTTATCGACCCTGCAGACAATTTTAATCGGGATTTCGTAAAGAAATATACAGCCAAACTGGCCACGGCCCCTTCTCTGCATCCCTCCAGGCCGTTGTGGCAATTTCATC
TTCTACACGTTAGGTCCGACGATGCAGCCTGCAGCTTGGTGTTGCGAATACATCATTCCTTGGGGGACGGAATCTCTCTAATGTCGCTCTTCTTGGCCTGTACCAGAAAGGCCACCGACTCTCAATCCCTTCCCACAATCCCACACCAAACTTCAACAAGGCCGATTGATGGCCGAGGAAGCTGGACAATTATATGGATT
AAGGACAGCGATACGCCAATTAAGGGTTATCCAGGCGTAGAATCAAGCCCTAAGCAGATCGAACACGTGACCCTCAGTCTGGAAGATTTCAAGATTGTCAAGACTGCCGTAAACGGGACGGTAAACGATGTCATGCTAGGGATGACTTCAGCAGGGATCCTGCGGTATTTGGAACGCGAATATGATGCCAAGGCCGAGCG
AATTTCAAAATTAGAAGACAGGAAATTTGGTGGTAAGCAAAGCCTTCCCTCGAATCTGCGTGTACGATCAGCAATTTTAGTGAATACAAGACCTGCTCCAGGACTTCATGATCTGGCCGACATGATGAAATCCGGTGGGAGTGGAGGAGCCAGGTGGGGGAATAATTTAGGGTATTTGATCCTTCCGATTCCCATGGTGA
AGCAGCAGAATCCTCTGGATTATGCTCGAGCGGCAACTGTCCTGACAAGGAAAAAGAAATTATCTCTGGAGGCACCTTTTACTTATTCCAGTGGGAAACTGCTGATGAAGCTTGCAGGTGTGAAGGCGGCTACTGTTGTGACATACAGAATGGTCACAAATACAAGTATTTCATTCTCCAACGTAGTTGGGCCAGTAGAT
GAGGTGGAATTTTTCGGTCACCCAATCGTTCATCTGATTCCAACGGTGTCTGGCCACCCTCATGCATTAACTATTCACTTCCAGAGTTACAT
>TRINITY_DN47062_c0_g1_i4 from sample A7 / Example unspliced isoform:CCTGGAGTCTTGCTATGTGTTGATACTATGATAGTTGCACTGCCCGAAGAATTATGTGAAGGCCAGTGCAGGGCGCCAGTCCCGATCCTTCATTTATGTATTTTCCCTGGAGCGGCAAAAGCTTTCAATCCCAGAAATTCTTATTACAGTCCAACCATTAATTAATCTTTAATAAAGACCACGTACATTGCATCCCCCAA
GCTTTCTCAGTACTTTCAATTTAACTTGAGTCTCAAGCAATCATAAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGCCAACGCCAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGTCAACGCCAGAGGAAGAATGGATTCATGGACCCATCTCCATGTCAAGCCCGCTCTCAGG
AGAGTTGCAGTGAAAAATGATAACAGATTCAGGGAACAGGAGCAGGAAAACTGGGAGGGATTGGAACCCGTGACCCCTGCAGGTCGCCTCTTTAACCAACCCTCTCTAAATTGTTACGTTCTTGTTATTGTAGGATTCACGACACACATGGACGTGGAAGCTTTAAAAGCAGGTCTGGAGGCGACTTTGATCAAACACAA
GCGCTTCTCCAGTATTGTGAAAGAAGATACATGCGGGGTTTTGAAATGGATGCCAGTCGATGTCAATATAGATGATCATGTTATACTCCCGTTTATCGACCCTGCAGACAATTTTAATCGGGATTTCGTAAAGAAATATACAGCCAAACTGGCCACGGCCCCTTCTCTGCATCCCTCCAGGCCGTTGTGGCAATTTCATC
TTCTACACGTTAGGTCCGAGGAGGCAGCCTGCAGCTTGGTGTTGCGAATACATCATTCCTTGGGGGACGGAATCTCTCTAATGTCGCTCTTCTTGGCCTGTACCAGAAAGGCCACCGACTCTCAATCCCTTCCCACAATCCCACACCAAACTTCAACAAGGCCGATTGATGGCCGAGGAAGCTGTAAGGAAATATTGCAT
GTTCGGGTTCTGATCATGTCTCTCTACAATCTTTTCCTTGTAATCTGGTACACTATTGTGGACATGATGCATTTTTTAGGGACAATTATATGGATTAAGGACAGCGATACGCCAATTAAGGGTTATCCAGGCGTAGAATCAAGCCCTAAGCAGATCGAACACGTGACCCTCAGTCTGGAAGATTTCAAGATTGTCAAGAC
TGCCGTAAACGGGgtaagtatggcgccttgctatctctccatcctattctttaatcttcggccatctgtagccttgtaaaccttcaatgtaggcaatctttgtcaattttggattgttgaattgtaaagctgaattctgacgttattgaagaaacacagACGGTAAACGATGTCATGTTGGGGATGACTTCAGCAGGGAT
CCTGCGGTATTTGGAACGCGAATACGAGGCCAAGGCCGAGGAAATCTCAAAATCAGAAGACAAGAAATTTGGTGGTAAACAGAGCCTTCCATCGAATCTGCGCGTGCGATCAACAATTTTAGTGAATACAAGACCTGCTCCAGGACTTCATGATCTGGCCGACATGATGAAATCCGGTGGGAGTGGAGGAGCCAGGTGGG
GGAATAATTTAGGGTATTTGATCCTTCCGATTCCCATGGTGAAGCAGCAGAATCCTCTGGATTATGCTCGAGCGGCAACTGTCCTGACAAGGAAAAAGAAATTATCTCTGGAGGCACCTTTTACTTATTCCAGTGGGAAACTGCTGATGAAGCTTGCAGGTGTGAAGGCGGCTACTGTTGTGACATACAGAATGGTCACA
AATACAAGTATTTCATTCTCCAACGTAGTTGGGCCAGTAGATGAGGTGGAATTTTTCGGTCACCCAATCGTTCATCTGATTCCAACGGTGTCTGGCCACCCTCATGCATTAACTATTCACTTCCAGAGTTACAT
Intron 3 GTATGACATA ... GGTTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 20 | 8 | 2 | 0 |
| A2 | 0 | 13 | 0 | 0 |
| A3 | 0 | 4 | 0 | 0 |
| A4 | 0 | 5 | 0 | 0 |
| A5 | 0 | 4 | 0 | 0 |
| A6 | 2.44 | 40 | 1 | 0 |
| A7 | 16.67 | 45 | 9 | 1 |
| A8 | 7.5 | 37 | 3 | 1 |
| A9 | 4.35 | 22 | 1 | 2 |
| A10 | 2.7 | 36 | 1 | 0 |
>TRINITY_DN44646_c0_g1_i6 from sample A8 / Example spliced isoformGAAGAATTATGTGAAGGCCAGTGCAGGGCGCCAGTCCCGATCCTTCATTTATGTATTTTCCCTGGAGCGGCAAAAGCTTTCAATCCCAGAAATTCTTATTACAGTCCAACCATTAATTAATCTTTAATAAAGACCACGTACATTGCATCCCCCAAGCTTTCTCAGTACTTTCAATTTAACTTGAGTCTCAAGCAATCATA
AGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGCCAACGCCAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGTCAACGCCAGAGGAAGAATGGATTCATGGACCCATCTCCATGTCAAGCCCGCTCTCAGGAGAGTTGCAGTGAAAAATGATAACAGATTCAGGGAACAGGAGCAG
GAAAACTGGGAGGGATTGGAACCCGTGACCCCTGCAGGTCGCCTCTTTAACCAACCCTCTCTAAATTGTTACGTTCTTGTTATTGTAGGATTCACGACACACATGGACGTGGAAGCTTTAAAAGCAGGTCTGGAGGCGACTTTGATCAAACACAAGCGCTTCTCCAGTATTGTGAAAGAAGATACATGCGGGGTTTTGAA
ATGGATGCCAGTCGATGTCAATATAGATGATCATGTTATACTCCCGTTTATCGACCCTGCAGACAATTTTAATCGGGATTTCGTAAAGAAATATACAGCCAAACTGGCCACGGCCCCTTCTCTGCATCCCTCCAGGCCGTTGTGGCAATTTCATCTTCTACACGTTAGGTCCGACGATGCAGCCTGCAGCTTGGTGTTGC
GAATACATCATTCCTTGGGGGACGGAATCTCTCTAATGTCGCTCTTCTTGGCCTGTACCAGAAAGGCCACCGACTCTCAATCCCTTCCCACAATCCCACACCAAACTTCAACAAGGCCGATTGATGGCCGAGGAAGCTGGACAATTATATGGATTAAGGACAGCGATACGCCAATTAAGGGTTATCCAGGCGTAGAATCA
AGCCCTAAGCAGATCGAACACGTGACCCTCAGTCTGGAAGATTTCAAGATTGTCAAGACTGCCGTAAACGGGACGGTAAACGATGTCATGTTGGGGATGACTTCAGCAGGGATCCTGCGGTATTTGGAACGCGAATACGGTCTGTTTCACAGATTTTTCTTTAGACGTTTCGCTTTAGATAGTTCCGTGACGAAATAATA
GCCATGATCAGAAAATAATGCAATATTAGTCCCATTGGGGAAAATTAGTCTGAATCTTGATAAATAAATTCGTTAAATGTTAGTCCTCCTGGTGAACATTGTTCTGAGTCTTGTATTTCCTCGTGTAATTTCAAGAGGCCAAGGCCGAGGAAATCTCAAAATCAGAAGACAAGAAATTTGGTGGTAAACAGAGCCTTCCA
TCGAATCTGCGCGTGCGATCAACAATTTTAGTGAATACAAGACCTGCTCCAGGACTTCATGATCTGGCCGACATGATGAAATCCGGCCAGAGTGGAGGAGCCAGGTGGGGAAATAATTTAGGGTATGTGATTCTTCCCCTTCCCATGGTGAAGCAGCAGGACCCTCTGGATTATGCTCGCGCTGCAACTGCCCTGACAAG
GAAAAAGAAATCATCTTGGGAGGCACCTCTTACTTATGCCATTGGAAAACTACTGATAAAGGTTGCAGGTGTCAAGGTGACTGCAGCTCTGACATACAGAATGATCTCACAGACAAGTATTTCATTCTCCAGCATCGTTGGGCCAGTCGAGGAGGTGGAATTTTTTGGACATCCAATCGTTCATTTGATTCCAACGGTGT
CTGGACACCCTCATTCACTAACTATACACTTTCAGAGTTACATGGAACGTGTGGTGCTGGTGGTGACTGCGGCGCTGGAAGTGATAAGGGATCCGAAACAGCTGTGCATCGATTGCGTGGAAGCTTTCCACGGCATGAAGGAGGCGGCCATTGCAAGCAATCTGATAGAAATGTAGGGAGAGGCACCTGTAGCGTTCAAA
TAGAGTCCAGACTACCTGAATCAGACCCAGCTTGAAGAGGGCATGGCATCTACTCTATGTGTAAAGAGAAGATAATCATGCGTGGTGGAACTTCAATTTGTTCGGGTGGACTGTAGTACCGCTTTTCAGCTTGTGGCCCCGGGAATATGTCGATGGATGGATTCCACAAAGTTTGACATTCATAAATATTGTTCTTATTC
TCATTCGTTCAATAAAATATATATTTGGGATATAAAACTGATTCAGTTTATG
>TRINITY_DN44646_c0_g1_i7 from sample A8 / Example unspliced isoform:GAAGAATTATGTGAAGGCCAGTGCAGGGCGCCAGTCCCGATCCTTCATTTATGTATTTTCCCTGGAGCGGCAAAAGCTTTCAATCCCAGAAATTCTTATTACAGTCCAACCATTAATTAATCTTTAATAAAGACCACGTACATTGCATCCCCCAAGCTTTCTCAGTACTTTCAATTTAACTTGAGTCTCAAGCAATCATA
AGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGCCAACGCCAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGTCAACGCCAGAGGAAGAATGGATTCATGGACCCATCTCCATGTCAAGCCCGCTCTCAGGAGAGTTGCAGTGAAAAATGATAACAGATTCAGGGAACAGGAGCAG
GAAAACTGGGAGGGATTGGAACCCGTGACCCCTGCAGGTCGCCTCTTTAACCAACCCTCTCTAAATTGTTACGTTCTTGTTATTGTAGGATTCACGACACACATGGACGTGGAAGCTTTAAAAGCAGGTCTGGAGGCGACTTTGATCAAACACAAGCGCTTCTCCAGTATTGTGAAAGAAGATACATGCGGGGTTTTGAA
ATGGATGCCAGTCGATGTCAATATAGATGATCATGTTATACTCCCGTTTATCGACCCTGCAGACAATTTTAATCGGGATTTCGTAAAGAAATATACAGCCAAACTGGCCACGGCCCCTTCTCTGCATCCCTCCAGGCCGTTGTGGCAATTTCATCTTCTACACGTTAGGTCCGACGATGCAGCCTGCAGCTTGGTGTTGC
GAATACATCATTCCTTGGGGGACGGAATCTCTCTAATGTCGCTCTTCTTGGCCTGTACCAGAAAGGCCACCGACTCTCAATCCCTTCCCACAATCCCACACCAAACTTCAACAAGGCCGATTGATGGCCGAGGAAGCTGTAAGGAAATATTGCATGTTCGGGTTCTGATCATGTCTCTCTACAATCTTTTCCTTGTAATC
TGGTACACTATTGTGGACATGATGCATTTTTTAGGGACAATTATATGGATTAAGGACAGCGATACGCCAATTAAGGGTTATCCAGGCGTAGAATCAAGCCCTAAGCAGATCGAACACGTGACCCTCAGTCTGGAAGATTTCAAGATTGTCAAGACTGCCGTAAACGGGACGGTAAACGATGTCATGTTGGGGATGACTTC
AGCAGGGATCCTGCGGTATTTGGAACGCGAATACGGTCTGTTTCACAGATTTTTCTTTAGACGTTTCGCTTTAGATAGTTCCGTGACGAAATAATAGCCATGATCAGAAAATAATGCAATATTAGTCCCATTGGGGAAAATTAGTCTGAATCTTGATAAATAAATTCGTTAAATGTTAGTCCTCCTGGTGAACATTGTTC
TGAGTCTTGTATTTCCTCGTGTAATTTCAAGAGGCCAAGGCCGAGGAAATCTCAAAATCAGAAGACAAGAAATTTGGTGGTAAACAGAGCCTTCCATCGAATCTGCGCGTGCGATCAACAATTTTAGTGAATACAAGACCTGCTCCAGGACTTCATGATCTGGCCGACATGATGAAATCCGGCCAGAGTGGAGGAGCCAG
GTGGGGAAATAATTTAGGGTATGTGATTCTTCCCCTTCCCATGGTGAAGCAGCAGGACCCTCTGGATTATGCTCGCGCTGCAACTGCCCTGACAAGGAAAAAGAAATCATCTTGGGAGGCACCTCTTACTTATGCCATTGGAAAACTACTGATAAAGGTTGCAGGTGTCAAGGTGACTGCAGCTCTGACATACAGAATGA
TCTCACAGACAAGTATTTCATTCTCCAGCATCGTTGGGCCAGTCGAGGAGGTGGAATTTTTTGGACATCCAATCGTTCATTTGATTCCAACGGTGTCTGGACACCCTCATgtatgacatatgaataaagaataagaatttatttatattccatcgtaagtagcagtcagtattcgattgaactgatgaagatgatgatac
ggtcgggttttgcagTCACTAACTATACACTTTCAGAGTTACATGGAACGTGTGGTGCTGGTGGTGACTGCGGCGCTGGAAGTGATAAGGGATCCGAAACAGCTGTGCATCGATTGCGTGGAAGCTTTCCACCACATGAAGCAGGCGGCCGTTGGGAACAACAATAGACAATCTGACACGTAATGTGATTTGTTTTTTTT
GTTTTTTTAAAGTTAAAAATTTATCTTCCAGTTATTCTGAAGGAATCAAGGAAGGAAGGCTAAACACTTATAGGAAATCCCAACAAATTTTCTCACATATCGTGGATGGTAGGTCGAGCAAACAATCAGCTGGTTATCTAAATCAGTCATCCAAACCAGAAAATGTCATGTGATTTGCTATAGAAAATATGTTCATTGTA
ATTTGAGTGAGTCGAACGGCG
Intron 4 GTCTGTTTCA ... TAATTTCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 17.18 | 28.9 | 10.1 | 6 |
| A2 | 13.09 | 19.9 | 2.5 | 3 |
| A3 | 21.21 | 26 | 7.4 | 7 |
| A4 | 22.22 | 14 | 3 | 4 |
| A5 | 25 | 9 | 2.8 | 3 |
| A6 | 8.34 | 43.9 | 8.6 | 4 |
| A7 | 21.63 | 68.8 | 7.8 | 19 |
| A8 | 22.99 | 56.9 | 13.5 | 17 |
| A9 | 12.12 | 58 | 8.5 | 8 |
| A10 | 30 | 63 | 13.8 | 27 |
>TRINITY_DN117121_c0_g1_i2 from sample A1 / Example spliced isoformCCTTCATTTATGTATTTTCCCTGGAGCGGCAAAAGCTTTCAATCCCAGAAATTCTTATTACAGTCCAACCATTAATTAATCTTTAATAAAGACCACGTACATTGCATCCCCCAAGCTTTCTCAGTACTTTCAATTTAACTTGAGTCTCAAGCAATCATAAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACC
AGGCCAACGCCAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGTCAACGCCAGAGGAAGAATGGATTCATGGACCCATCTCCATGTCAAGCCCGCTCTCAGGAGAGTTGCAGTGAAAAATGATAACAGATTCAGGGAACAGGAGCAGGAAAACTGGGAGGGATTGGAACCCGTGACCCCTGCAGGTCG
CCTCTTTAACCAACCCTCTCTAAATTGTTACGTTCTTGTTATTGTAGGATTCACGACACACATGGACGTGGAAGCTTTAAAAGCAGGTCTGGAGGCGACTTTGATCAAACACAAGCGCTTCTCCAGTATTGTGAAAGAAGATACATGCGGGGTTTTGAAATGGATGCCAGTCGTTGTGAATATAGATGATCATGTTATAC
TCCCGTTTATCGACCCTCACGAAAATATTAATCAAGATTTTGTAAAGAAATATACAGCCAAATTGGCCACGGCCCCTCCTCTGCATACCTCCAAGCCGCTGTGGCAATTACATCTTCTGCGCGTTGGATCGGACGAGGCAGCCTCCAGCTTGGTATTGCGAGTACATCATTCCTTGGGGGACGGCATCTCTCTAATGTCG
CTCTTCTTGGCCTGTACCAGAAAAGTTACAGACCCTCAATCCCTTCCCACAATCCCAGGCCAAAGTTCAACAAGGTCGATTGATGGCCGAGGAAGCTGGAAAAGAATATTGCATGTTCGGCTTCTGATTATGGCTCTCTACAATCTTTTCCTTGTAATCTGGTACACTATTGTGGACATGATGCATTTTTTAGGGACAAT
TATATGGATTAAGGACAGCGATACGCCAATTAAGGGTTATCCAGGCGTAGAATCAAGCCCTAAGCAGATCGAACACGTGACCCTCAGTCTGGAAGATTTCAAGATTGTCAAGACTGCCGTAAACGGGACGGTAAACGATGTCATGTTGGGGATGACTTCAGCAGGGATCCTGCGGTATTTGGAACGCGAATACGAGGCCA
AGGCCGAGGAAATCTCAAAATCAGAAGACAAGAAATTTGGTGGTAAACAGAGCCTTCCATCGAATCTGCGCGTGCGATCAACAATTTTAGTGAATACAAGACCTGCTCCAGGACTTCATGATCTGGCCGACATGATGAAATCCGGTAAGAGTGGAAGAGCCAGGTGGGGGAATAATGTAGGTTATTTGATTCTTCGGTTT
CCCATGGTGAAGCAGCAGAACCCTCTGGATTATGCTCGAGCGGCAACTGCCCTGATAAGGAAAAAGAAATTATCTCTGGAGGCACCTTTTACTTATGCCAGTGCGAAACTACTGATTAAGCTTGCAGGTGTCAAGGTGTCTACCGCTGTGACACACAGAATGATCGCAAACACCAGTATTTCATTCTCCAACATTGTTGG
GCCAGCGGAGGAGGTGGAATTTTTCGGTCACCCAATCGTTCATCTGATTCCAACGGTGTCTGGACACCCTCATGTATGACATATATGAAGAATAAGTATTGGTAGCAAAATTCCATTTCATTTTCTGTGTGCATTCGAAAGCAAATGAATAACTAAAAGTATCCGACTGGTTGGTTTTGCAGTCACTAACA
>TRINITY_DN117121_c0_g1_i4 from sample A1 / Example unspliced isoform:CTCTCTACAATCTTTTCCTTGTAATCTGGTACACTATTGTGGACATGATGCATTTTTTAGGGACAATTATATGGATTAAGGACAGCGATACGCCAATTAAGGGTTATCCAGGCGTAGAATCAAGCCCTAAGCAGATCGAACACGTGACCCTCAGTCTGGAAGATTTCAAGATTGTCAAGACTGCCGTAAACGGGACGGTA
AACGATGTCATGTTGGGGATGACTTCAGCAGGGATCCTGCGGTATTTGGAACGCGAATACGgtctgtttcacagatttttctttagacgtttcgctttagatagttccgtgacgaaataatagccatgatcagaaaataatgcaatattagtcccattggggaaaattagtctgaatcttgataaataaattcgttaaat
gttagtcctcctggtgaacattgttctgagtcttgtatttcctcgtgtaatttcaagAGGCCAAGGCCGAGGAAATCTCAAAATCAGAAGACAAGAAATTTGGTGGTAAACAGAGCCTTCCATCGAATCTGCGCGTGCGATCAACAATTTTAGTGAATACAAGACCTGCTCCAGGACTTCATGATCTGGCCGACATGATG
AAATCCGGTAAGAGTGGAAGAGCCAGGTGGGGGAATAATGTAGGTTATTTGATTCTTCGGTTTCCCATGGTGAAGCAGCAGAACCCTCTGGATTATGCTCGAGCGGCAACTGCCCTGATAAGGAAAAAGAAATTATCTCTGGAGGCACCTTTTACTTATGCCAGTGCGAAACTACTGATTAAGCTTGCAGGTGTCAAGGT
GTCTACCGCTGTGACACACAGAATGATCGCAAACACCAGTATTTCATTCTCCAACATTGTTGGGCCAGCGGAGGAGGTGGAATTTTTCGGTCACCCAATCGTTCATCTGATTCCAACGGTGTCTGGACACCCTCATTCACTAACAATACACTTTCAAAGTTACATGGGAAGAGTGACATTGGTGGTAACTGCGGCATCGG
AAGTGGTAAGGGATCCGAAACAGCTGTGCATCGATTGCGAAGAAGCTTTCCACAGCATGAAGCAGGCGGCCATTGCAAGCAATCGACACGCCATCTGATCTGTCAGGAGGATCTGATAGAAATGTAAATGCAGAGGCACATCAGCCTGTAACGTTCAAGGAATCAAGTACAGTCTACCTGAATCACCCAGTTTGAAGAGG
GCATAGCGTCTAGGTACTTATGTATATATAATAAAGAGAAGATAATCTTGCGTGGTGGAACTTCCAATGTTCGAGTGGAGTGTGGTACTGCTTGTCAGCTTTGATTCACTCTTCATTAATTTCAATGGAAGGATTTGACAAAATGTTGACACTCATCACTGATCAGGTATGGTTTATCTTGACACTCATCACTGGTGGAG
GGTCGGCTGTTTTTTGAATTCTGGGATGCTGATATCCTTCGGGAATCTGGCAGCTACTTATTTTATGTTTTTTGAATTTTGGGATGTTGATATCCTTCGGGAATCTGGTAGCTACTTATTGTATGGTCCGTGATATGTTTTGATGTTTTTTTTGGGTTTGGTGACTATTGTGGCTGGTTGCCGTGGTATTTATTTGCTTT
ATCAGTTTTTAGTTTTGTTTGTATACCCTCACTGTATTGTCTGTTGTGTCTATTGGGAGGTTTTCTTCTTCTTGCCCAGGGGCTGTTCCTATTTTCTACTTTTTGGTTGGCCTGGAATCTATTTTACTGTGAAAGTCTGCTGTAATTTCCTTTATATATTTAATTTTAAAGTATAGTATTTAATTTGTGAAAAAAAAGTA
TGGTTTATCTTCTGCAAAGAAACATGTCACATATATTTCTGGAATATACGGCTGGTTTACTGTTCTGGTTCACTACTTTTTAAAGCCACATATATTTCTGGAATATACGGCTGGTTTACTGTTCTGGTTCACTACTTTTTAAAGCCACATATATTTCTGGAATATACG
Intron 5 GTAAGGAAAT ... CATTTTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 88.2 | 2 | 12 | 17.9 |
| A2 | 66.1 | 10 | 17 | 22 |
| A3 | 75.38 | 8 | 21 | 28 |
| A4 | 41.18 | 10 | 3 | 11 |
| A5 | 59.09 | 9 | 14 | 12 |
| A6 | 77.36 | 18 | 68 | 55 |
| A7 | 68.18 | 21 | 36 | 54 |
| A8 | 72.28 | 14 | 25 | 48 |
| A9 | 76.27 | 14 | 39 | 51 |
| A10 | 62.04 | 26 | 35 | 50 |
>TRINITY_DN112311_c0_g5_i1 from sample A2 / Example spliced isoformGTTTAAATGAAGACTTTATATCTACGATTAATGGATTTTTCTCGTCCGTACTGAGATTCCTGGAGTCTTGCTATGTGTTGATACTATGATAGTTGCACTGCCCGAAGAATTATGTGAAGGCCAGTGCAGGGCGCCAGTCCCGATCCTTCATTTATGTATTTTCCCTGGAGCGGCAAAAGCTTTCAATCCCAGAAATTCTT
ATTACAGTCCAACCATTAATTAATCTTTAATAAAGACCACGTACATTGCATCCCCCAAGCTTTCTCAGTACTTTCAATTTAACTTGAGTCTCAAGCAATCATAAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGCCAACGCCAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGT
CAACGCCAGAGGAAGAATGGATTCATGGACCCATCTCCATGTCAAGCCCGCTCTCAGGAGAGTTGCAGTGAAAAATGATAACAGATTCAGGGAACAGGAGCAGGAAAACTGGGAGGGATTGGAACCCGTGACCCCTGCAGGTCGCCTCTTTAACCAACCCTCTCTAAATTGTTACGTTCTTGTTATTGTAGGATTCACGA
CACACATGGACGTGGAAGCTTTAAAAGCAGGTCTGGAGGCGACTTTGATCAAACACAAGCGCTTCTCCAGTATTGTGAAAGAAGATACATGCGGGGTTTTGAAATGGATGCCAGTCGATGTCAATATAGATGATCATGTTATACTCCCGTTTATCGACCCTGCAGACAATTTTAATCGGGATTTCGTAAAGAAATATACA
GCCAAACTGGCCACGGCCCCTTCTCTGCATCCCTCCAGGCCGTTGTGGCAATTTCATCTTCTACACGTTAGGTCCGAGGAGGCAGCCTGCAGCTTGGTGTTGCGAATACATCATTCCTTGGGGGACGGAATCTCTCTAATGTCGCTCTTCTTGGCCTGTACCAGAAAGGCCACCGACTCTCAATCCCTTCCCACAATCCC
ACACCAAACTTCAACAAGGCCGATTGATGGCCGAGGAAGCTGGACAATTATATGGATTAAGGACAGCGATACGCCAATTAAGGGTTATCCAGGCGTAGAATCAAGCCCTAAGCAGATCGAACACGTGACCCTCAGTCTGGAAGATTTCAAGATTGTCAAGACTGCCGTAAACGGGACGGTAAACGATGTCATGTTGGGGA
TGACTTCAGCAGGGATCCTGCGGTATTTGGAACGCGAATACGAGGCCAAGGCCGAGGAAATCTCAAAATCAGAAGACAAGAAATTTGGTGGTAAACAGAGCCTTCCATCGAATCTGCGCGTGCGATCAACAATTTTAGTGAATACAAGACCTGCTCCAGGACTTCATGATCTGGCCGACATGATGAAATCCGGTAAGAGT
GGAAGAGCCAGGTGGGGGAATAATGTAGGTTATTTGATTCTTCGGTTTCCCATGGTGAAGCAGCAGAACCCTCTGGATTATGCTCGAGCGGCAACTGCCCTGATAAGGAAAAAGAAATTATCTCTGGAGGCACCTTTTACTTATGCCAGTGCGAAACTACTGATTAAGCTTGCAGGTGTCAAGGTGTCTACCGCTGTGAC
ACACAGAATGATCGCAAACACCAGTATTTCATTCTCCAACATTGTTGGGCCAGCGGAGGAGGTGGAATTTTTCGGTCACCCAATCGTTCATCTGATTCCAACGGTGTCTGGACACCCTCATTCACTAACAATACACTTTCAAAGTTACATGGGAAGAGTGACATTGGTGGTAACTGCGGCATCGGAAGTGGTAAGGGATC
CGAAACAGCTGTGCATCGATTGCGAAGAAGCTTTCCACAGCATGAAGCAGGCGGCCATTGCAAGCAATCGACACGCCATCTGATCTGTCAGGAGGATCTGATAGAAATGTAAATGCAGAGGCACATCAGCCTGTAACGTTCAAGGAATCAAGTACAGTCTACCTGAATCACCCAGTTTGAAGAGGGCATGGCGTCTAGGT
ACTTATGTATATATAATAAAGAGAAGATAATCTTGCGTGGTGGAACTTCCAATGTTCGAGTGGAGTGTGGTACTGCTTGTCAGCTTTGATTCACTCTTCATTAATTTCAATGGAAGGATTTGACAAAATGTTGACACTCATCACTGATCAGGTATGGTTTATCTTGACACTCATCACTGGTGGAGGGTCGGCTGTTTTTT
GAATTCTGGGATGCTGATATCCTTCGGGAATCTGGCAGCTACTTATTTTATGTTTTTTGAATTTTGGGATGTTGATATCCTTCGGGAATCTGGTAGCTACTTATTGTATGGTCCGTGATATGTTTTGATGTTTTTTTTGGGTTTGGTGACTATTGTGGCTGGTTGCCGTGGTATTTATTTGCTTTATCAGTTTTTAGTTT
TGTTTGTATACCCTCACTGTATTGTCTGTTGTGTCTATTGGGAGGTTTTCTTCTTCTTGCCCAGGGGCTGTTCCTATTTTCTACTTTTTGGTTGGCCTGGAATCTATTTTACTGTGAAAGTCTGCTGTAATTTCCTTTATATATTTAATTTTAAAGTATAGTATTTAATTTGTGAAAAAAAAGTATGGTTTATCTTCTGC
AAAGAAACATGTCACATATATTT
>TRINITY_DN112311_c0_g5_i2 from sample A2 / Example unspliced isoform:GTTTAAATGAAGACTTTATATCTACGATTAATGGATTTTTCTCGTCCGTACTGAGATTCCTGGAGTCTTGCTATGTGTTGATACTATGATAGTTGCACTGCCCGAAGAATTATGTGAAGGCCAGTGCAGGGCGCCAGTCCCGATCCTTCATTTATGTATTTTCCCTGGAGCGGCAAAAGCTTTCAATCCCAGAAATTCTT
ATTACAGTCCAACCATTAATTAATCTTTAATAAAGACCACGTACATTGCATCCCCCAAGCTTTCTCAGTACTTTCAATTTAACTTGAGTCTCAAGCAATCATAAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGCCAACGCCAGATTGTTAAACACCCTCAATCGACCCCTCCACCTTATACCAGGT
CAACGCCAGAGGAAGAATGGATTCATGGACCCATCTCCATGTCAAGCCCGCTCTCAGGAGAGTTGCAGTGAAAAATGATAACAGATTCAGGGAACAGGAGCAGGAAAACTGGGAGGGATTGGAACCCGTGACCCCTGCAGGTCGCCTCTTTAACCAACCCTCTCTAAATTGTTACGTTCTTGTTATTGTAGGATTCACGA
CACACATGGACGTGGAAGCTTTAAAAGCAGGTCTGGAGGCGACTTTGATCAAACACAAGCGCTTCTCCAGTATTGTGAAAGAAGATACATGCGGGGTTTTGAAATGGATGCCAGTCGATGTCAATATAGATGATCATGTTATACTCCCGTTTATCGACCCTGCAGACAATTTTAATCGGGATTTCGTAAAGAAATATACA
GCCAAACTGGCCACGGCCCCTTCTCTGCATCCCTCCAGGCCGTTGTGGCAATTTCATCTTCTACACGTTAGGTCCGAGGAGGCAGCCTGCAGCTTGGTGTTGCGAATACATCATTCCTTGGGGGACGGAATCTCTCTAATGTCGCTCTTCTTGGCCTGTACCAGAAAGGCCACCGACTCTCAATCCCTTCCCACAATCCC
ACACCAAACTTCAACAAGGCCGATTGATGGCCGAGGAAGCTgtaaggaaatattgcatgttcgggttctgatcatgtctctctacaatcttttccttgtaatctggtacactattgtggacatgatgcattttttagGGACAATTATATGGATTAAGGACAGCGATACGCCAATTAAGGGTTATCCAGGCGTAGAATCAA
GCCCTAAGCAGATCGAACACGTGACCCTCAGTCTGGAAGATTTCAAGATTGTCAAGACTGCCGTAAACGGGACGGTAAACGATGTCATGTTGGGGATGACTTCAGCAGGGATCCTGCGGTATTTGGAACGCGAATACGAGGCCAAGGCCGAGGAAATCTCAAAATCAGAAGACAAGAAATTTGGTGGTAAACAGAGCCTT
CCATCGAATCTGCGCGTGCGATCAACAATTTTAGTGAATACAAGACCTGCTCCAGGACTTCATGATCTGGCCGACATGATGAAATCCGGTAAGAGTGGAAGAGCCAGGTGGGGGAATAATGTAGGTTATTTGATTCTTCGGTTTCCCATGGTGAAGCAGCAGAACCCTCTGGATTATGCTCGAGCGGCAACTGCCCTGAT
AAGGAAAAAGAAATTATCTCTGGAGGCACCTTTTACTTATGCCAGTGCGAAACTACTGATTAAGCTTGCAGGTGTCAAGGTGTCTACCGCTGTGACACACAGAATGATCGCAAACACCAGTATTTCATTCTCCAACATTGTTGGGCCAGCGGAGGAGGTGGAATTTTTCGGTCACCCAATCGTTCATCTGATTCCAACGG
TGTCTGGACACCCTCATTCACTAACAATACACTTTCAAAGTTACATGGGAAGAGTGACATTGGTGGTAACTGCGGCATCGGAAGTGGTAAGGGATCCGAAACAGCTGTGCATCGATTGCGAAGAAGCTTTCCACAGCATGAAGCAGGCGGCCATTGCAAGCAATCGACACGCCATCTGATCTGTCAGGAGGATCTGATAG
AAATGTAAATGCAGAGGCACATCAGCCTGTAACGTTCAAGGAATCAAGTACAGTCTACCTGAATCACCCAGTTTGAAGAGGGCATGGCGTCTAGGTACTTATGTATATATAATAAAGAGAAGATAATCTTGCGTGGTGGAACTTCCAATGTTCGAGTGGAGTGTGGTACTGCTTGTCAGCTTTGATTCACTCTTCATTAA
TTTCAATGGAAGGATTTGACAAAATGTTGACACTCATCACTGATCAGGTATGGTTTATCTTGACACTCATCACTGGTGGAGGGTCGGCTGTTTTTTGAATTCTGGGATGCTGATATCCTTCGGGAATCTGGCAGCTACTTATTTTATGTTTTTTGAATTTTGGGATGTTGATATCCTTCGGGAATCTGGTAGCTACTTAT
TGTATGGTCCGTGATATGTTTTGATGTTTTTTTTGGGTTTGGTGACTATTGTGGCTGGTTGCCGTGGTATTTATTTGCTTTATCAGTTTTTAGTTTTGTTTGTATACCCTCACTGTATTGTCTGTTGTGTCTATTGGGAGGTTTTCTTCTTCTTGCCCAGGGGCTGTTCCTATTTTCTACTTTTTGGTTGGCCTGGAATC
TATTTTACTGTGAAAGTCTGCTGTAATTTCCTTTATATATTTAATTTTAAAGTATAGTATTTAATTTGTGAAAAAAAAGTATGGTTTATCTTCTGCAAAGAAACATGTCACATATATTT
Intron 6 GTCTGTACTA ... TGATTTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 0 | 5 | 0 | 0 |
| A2 | 33.33 | 6 | 3 | 0 |
| A3 | 33.33 | 8 | 4 | 0 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 33.33 | 2 | 1 | 0 |
| A6 | 36.36 | 7 | 4 | 0 |
| A7 | 22.73 | 17 | 5 | 1 |
| A8 | 33.33 | 6 | 3 | 2 |
| A9 | 21.43 | 11 | 3 | 0 |
| A10 | 23.53 | 13 | 4 | 3 |
>TRINITY_DN44646_c0_g1_i5 from sample A8 / Example spliced isoformGTTCACAGCCTAAGTATCAGAACAAGAATGGAATCAGCGCCAGGCGATGTTCATGTCAAGAGAGTCGCAGTAAAAATTGATAACAGATTCAGAGAGCAGGAAGATTTGGAGGGATTGGAACCCATGACCCCGGCAGGCCGCGTCTTTAGCCAACCATCTCTAAATTGTTACATTCTTGTCATTGTAGGATTGAAGGTACA
GATCGATATCGAGGCCGCAACAGCAGGTCTGGAGGCCACTTTGATTAAGCACAAGCGCTTCTCCAGCATTGTGAAGGAAGACAAACGCGGGGGTTTGAAATGGTTGCCTGTCAATGTGAATATCAGTGATCATATTGTAATCCCTTTTATTGACCCGACGGACAATTGCAATCTGGATTTTGTGAAGAACTATACAGCCA
ACTTGGCAACAGCCCCTTCCCTGGATCCTTCCAGGCCGCTGTGGCAAATTCATTTTCTGCGCGTTAGATCGGAGGATGCAGAATCCAGCGCCGTGTTAAGAATACATCATTCCTTAGGGGACGGAGTGTCTCTCATGTCGCTCTTCTTGGCCTGTACCAGAAAGGTCACTGATCCTCAATCCCTTCCCACAATCCCACGC
CAAAATCCAAAATCTAACACAGGGTCGATTAATGGGGAAAGCAAGGGAATTCCTGCCCTGATCATGGCTGTCTGCAATCTTTTCCATCTAATCTGGTACACTATTGTGGACATGATGCATATTTTAGCCACAATTGTCTGTATTAAGGACAGCGATACTTCAATTAAGGGTTATCCCGGTGTAGAAACAAGCCCTAAGCA
GATTCAACACGCGATCCTCAGTCTGGAAGATTGCAAGATTATCAAGACTGCTGTAAACGGGACGGTAAACGATGTTATGCTGGCGATGACTTCAGCAGGGATCCTGCGGTATTTAGAACGCGAATACGAGTCAAAGGTTGAGGGAATCTCAAAATCAAAATCAGAAGACAGGAAATTCGGTGGTAAGCAAAGCTTTCCAT
CGAATCTGCGAGTGCGATCAGCCATTTTAGTGAATACGAGGCCTGTTCCAGGACTTCATGTAGAGCATTTCTCTTTTCCTCCTAATTTGCTGCATTT
>TRINITY_DN44646_c0_g1_i1 from sample A8 / Example unspliced isoform:GTTCACAGCCTAAGTATCAGAACAAGAATGGAATCAGCGCCAGGCGATGTTCATGTCAAGAGAGTCGCAGTAAAAATTGATAACAGATTCAGAGAGCAGGAAGATTTGGAGGGATTGGAACCCATGACCCCGGCAGGCCGCGTCTTTAGCCAACCATCTCTAAATTGTTACATTCTTGTCATTGTAGGATTGAAGGTACA
GATCGATATCGAGGCCGCAACAGCAGGTCTGGAGGCCACTTTGATTAAGCACAAGCGCTTCTCCAGCATTGTGAAGGAAGACAAACGCGGGGGTTTGAAATGGTTGCCTGTCAATGTGAATATCAGTGATCATATTGTAATCCCTTTTATTGACCCGACGGACAATTGCAATCTGGATTTTGTGAAGAACTATACAGCCA
ACTTGGCAACAGCCCCTTCCCTGGATCCTTCCAGGCCGCTGTGGCAAATTCATTTTCTGCGCGTTAGATCGGAGGATGCAGAATCCAGCGCCGTGTTAAGAATACATCATTCCTTAGGGGACGGAGTGTCTCTCATGTCGCTCTTCTTGGCCTGTACCAGAAAGGTCACTGATCCTCAATCCCTTCCCACAATCCCACGC
CAAAATCCAAAATCTAACACAGGGTCGATTAATGGGGAAAGCAAGGGAATTCCTGCCCTGATCATGGCTGTCTGCAATCTTTTCCATCTAATCTGGTACACTATTGTGGACATGATGCATATTTTAGCCACAATTGTCTGTATTAAGGACAGCGATACTTCAATTAAGGGTTATCCCGGTGTAGAAACAAGCCCTAAGCA
GATTCAACACGCGATCCTCAGTCTGGAAGATTGCAAGATTATCAAGACTGCTGTAAACGGGACGGTAAACGATGTTATGCTGGCGATGACTTCAGCAGGGATCCTGCGGTATTTAGAACGCGAATACGgtctgtactatcagatctttttgtctagcaaatgcagtactccatatttactgttagaagattctgcgacag
aataatgaccataatcagaaaatatcaattgcccttttaggacttataaataaatccacgtaatgttgatcttggtggggaatatgcttctaaatcttgtaattccttgtgtgatttgaagAGTCAAAGGTTGAGGGAATCTC