sp|O22806|BUBR1_ARATH ----> Mitotic spindle checkpoint protein BUBR1
Intron 1 GTTGGTTCGT ... GCTTGGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 14.11 | 70 | 6 | 17 |
| A2 | 26.32 | 63 | 24 | 21 |
| A3 | 28.5 | 69 | 33 | 22 |
| A4 | 22.63 | 53 | 13 | 18 |
| A5 | 15.79 | 8 | 2 | 1 |
| A6 | 33.33 | 2 | 2 | 0 |
| A7 | 28.3 | 19 | 5 | 10 |
| A8 | 16.67 | 10 | 3 | 1 |
| A9 | 20 | 22 | 5 | 6 |
| A10 | 23.94 | 27 | 11 | 6 |
>TRINITY_DN107313_c0_g1_i2 from sample A3 / Example spliced isoformGGGGAAATCCTTACAAACTAAAATTTAGACTCAGATCGCCATCCATTCCCGCGCTTCGCTTGTACCTGTATTTGTATTGGGAGCTCTAGACACAGAGAAATGGCATGGTAAATCTCTTAAAACGAAGCTCAAATGGAGAATCCAGGATTTTCAAGGAAACAAATGGAGAATCCAAGCGATTTTTATACTTCGCTGATCAG
GGCCACCAAGACCTATGTCGGCAACGATCCTCTTTTACCATGGCTAGAAGGCATCAACAAAATCAAGGAGGTTCTTCAACCTGAGGTCGCCAAGCAGAAGTTACCTCGTTTCCTCGAGAAATGCGCACAAACGTTTCTGACTAGCAAACGTTACAAAAACGATCTGAGATACCTTCAAGTCTGGATTCAATTGCTTGAAT
TCGTGCCTAATCGGAGGGAGGCGCTATCGGTGATGGAGAATAATCAGATTGGACTGAAGCATGCTCTTTATTACCAAGCGTATGCGCTCCACTACGAGAAATTGAAAAAATTTCCAGAAGCCGACGCCATGTTCCGGCTGGGTATTCAAAGGTTTGCACATCCTACTGAGAGTTTGCATCAATCTTATGATGCCTTTCTT
GGACGTATGGCTTCTCGCAATAGAAGAAAACTGAAATCTCTGCAAGCGAGGTCAGAATTGCCCTCCAAAAACATTCATTATGAACCTAGGCATTTTGTAAGCCATGCAGACATGGGCATTAAAGAAGTTGGAAACGAGAAGGAGGTTTATCCAAAAGGTGAATATCAATTTGATGCTAATTCATCCTTAAATCATCAAGC
TGAAATCTGCAATAATGTGGAGAAGAGCTGTCCAACTTGGAATTCAATAGCAGAATCTGCTAGCAACCCAGAATCAAGTACCAAGTGCAAAAACGATCAGGTCGAATGTTCAAGGTCTTGGAGTCCAGAAACATCGGAACAGAGATCTATTGTAGTATCTTCTGACAAATCGACTGGTCATGGTCAAATTTGTGATGAAG
TTTCAATAAAATCTGGAAGATTATTTGACGGGACAAATTTACTGACCGTGGAAGATGGAGAAGCAAACAAAGAAAAAGTAGCCTCAGGAGTATATAACATAAGAGAGTTAGAGACAGTGGTTGATTCGAAAGCTACTCTGGTTTCTAATTCTAACTGTGAAGATACAATCAAGACATGTGAAAGCCTAGACTGTGCCGGT
TTTTGTAGTACTAAAAAAGTAGAAGATGCATGCCACAATGTCCTTATTGATGCATGCCAGTCACAGCATGTTGATAAACTCTTTAAAACAGGCTCATCCAAAAAAACCAACAGCACCATGCCAGCTGTCGAAATCATTCAGATATTGCCTGATGAAAGTTTGGAAGACCTAGCTTTGATACAGCAACCCAGTATTTCACG
TGAATTCAAGGAAAATAATTCTTCTGTTCCAGCTGATAAGAAGTTAGGGGATTCTGTACCTGCCAAAGGATTCAAGAAATTGAGTGATGAGTGTTTTGAAGGCAACCAAGAACAAAGACCCATAGAGGGTAATAGATCAAAGGATAACAGTTCTGCCTCCATACCAGCTGAAGTTTTCCAAGAAATTTCCATAGTGCACA
GAGAGTTGAATAAAGAATGCAGAACTGGATTGGGGATAAAAAATCAGAGGCAATCAGGTGAAGGTGCTTATACTATAGCTAGTTTTCCATCTAAGTCCTGTAGTGAAGACACAATCATTGTGCGCAAATTTGTGGATTCTGCTATTGTTTGTTATACAGGAAAAGTAGAGGATGCTTATCATCATGGTTTGGTAGAACCT
ACCATCAATACAAAAGAAGCTATGGCAGACATAAATGATATGTTTGGGAAACCACTGAATTTTGAAAAATTAAGAACAGGAAATCGATCATGGAGAAGGCAAACAAATAAAGCCACTGAAAGCTTTCAGGTATTGGCTGATGAAGATTTGAAAAAGGCAGGTTCAACAAAGCAATGTCTTCTTTCTGATACACTGGAGGG
ACATACCTCTATTTCTTCATTTTCACAAGACTTGCAGGTATTTGTAGATGAAGATCTCATGCACAGTTCCTCTAAAGAAGTTCCCAGTGTGACTAATTCATCTAAGAATCTTGCACCTGTCAAACACTTGCAAATATTGGCTGATAATAGTTTTAATGAGAACCAAAATGTATTATTCATGCAGAGGAATACATGTGAAG
ATGGGGAACTTTCCACTGTAGTGGAAGTTTTCCAAGATGGACTGGCCACAGAAGGAAAATGGGACAAAAACGGGAGCAGTTCAGAGAGAGAAAATGGTCATGGACAGTTGGGAAATGCTGAAGAAGTGAGCATGCATTCCAAGTTTTCTGGTGAGGACACAATTGCGATACGCAAATTTGTAGATTCTGCTATAGATTAT
GATAGTAAAGAATTGGAAATTGCTTGTCATCATGGTCTTGTCGATCCTACCATTAATACAAAGGAAGCTATGGCAGAAATAAATGATATGTTTGGGAAACCACTGAATTTTGAAAAATCAAGACCAGGAAATCAACCATGCAGAAGGCAAACAAATAAACCCATCGAAATCTTCCAGGTATTGGCTGATGAATATTTGGA
AGAGCCAGGTTCAACAGAGCAATGTCTTCTGTCTGATACACCGGAGGGACATACTTCTATTTCTCCATTTTCAAAAGACTTGCAGGTATTTGTAGATGAAAATCTCATGCACAGTCCGTCTAAAGAAGTTCCCAGTATGACTAATTCATCTAAGAACATTGCACCTGTCAAAGGCTTGCAAATATTGGCTGATAATAGTT
TTAACGAGAACCAAAATGTGATATTCATTCAGAGGAATACATGTGAAGATGGGGAACTTTCCACTGTCCAAGATGGACTAGCCACAGAAGGAAAATGGGACAAAAACAGTAGCAGTTCAGAAAGAAAAAGTGGTCATGGACAGTTGGGAAATGCTGAAGAAGTGAGCATGCATTCCAAGTTTTCTGGTGAGGACACAATT
GCGATACGCAAATTTGTAGATTCTGCTATAGATGGTGATAGTAAAGAATTGGAGGTTGCTTGTCATCATGGTCTTGTTGATCCAACCATTAATACAAAGGAAGCAATGGAAGAAATAAACAATATGTTTTGGAAACCACTGCAATTTGACAAATTAAAAGAAAGAAATCGACCAGCAGGAGTGGAAATTCTTAAGCAACC
TACCGAAACCTTTCGGATATTTGCTGATGAAAACTTGGAAGAACAAGATTCTCCTGTTTCATCTTTCAATGATTTTGAGGTTTTTATAGATGAGAATCTTATGAATGGTTCCTTGAAAAAACTTCCAAGAGAGTTGTCTTCATCTGTGAATCTTACACCTTTCCAAGGTTTGCAGATGTTATCTGATGAGAACTTTGAAA
ATAAGACATCCAGAGAGTGCAACACATTCAAAGATAAGGGACCCTATGTGCCAGTTGAAGTATTTCAAGCCAGACAGGTCTCTGCTACAGTTAGTCTGCCTACTAATTCTAGCAGTGAAGACACAATTATCGTAAAAAAATTTGTAGATTCTGCTATTGTTGGTACTGAAGTAGAAGGTGCATGCCATCATGGTCTGGTT
GAACCTACTATTAACACAAAGGAAGCCATGGCTGAGATCAATGATATGTTTGGGAAACCGTTGGATTTTCACAATACAAAAAGGAGTTGTACCCTGAAACCTGAAACAATTATGCAAACAGTTAAAAGCTCTCCAATATCAGCCAATGGAGATAGTGGGAAGAAAGGTTTGATGCAGCAGCATCATTTACCTGGTAATTT
GGAGGAACACGATTCTGCCATTCCACTGGATAAAGGTTTTCAGATATTTATAGATGAAGATGTACATTGTGAGTCTACAAAGAACCATAAAAAAAAATCCTGCCTGTCTAGGGACATTGCATATGGCCCAATTTTGACTAATGAAAGCTCTGTAGTCTTGCAAAAGAAGGCATCTATGGATTGTAATGTTTCTGAAAATG
AGAATGTCTGTAAACCAGCTGAAGTTTTTCAGGTGTATATTGATGAACAATTTCAGGACTAGGAGTGAATTAGTTGCAGTTTATGATACTCCTGTTCTAGCTTAGTTGATGGCTTAATTGTGCCTTCAAGAGTTTGAATGCTTCCGGAGCAATGGCATGTCTAGGTTTTAAGATAGCTTGTTGGTGCTTACAATGAACTG
AATGCTCAAGGCAGCAAGCGGCAAGTTGCAACAAGTTTGAAGACATCCTTTTCTGGTGGATGCGTTAATATATGCTGATACATGTTAAATATTTTTATATCAAGGTTGTTACTTCTTACTGAACATGTGGCTGGAATTTATTTTTGGATACTTATTATCAATATGACAGTCCAGAAAGATTCGGCTTTCTCTCTGATGGA
TTCAAGGATGGGGATCGACAATTGTATGGCAGTAGGAGAGGCTTCCAATGGGGGCAAAACAATGTTCTCCCCGTGTCATTCACTAGCATCATAACTTTTAATCTTACGAATCCAATAATGATACTTGTTTCTTAGACAATGGTAAGGGTTCCTAAACCTGAGTAACATGTATCATGTCTCTGGTTTTTAGTCTCTTTACC
TTGATTGTAACTAAGGACACTTTTCTATCATTTTGATGATATGTAAACATAACATCTGACCTAGG
>TRINITY_DN107313_c0_g1_i1 from sample A3 / Example unspliced isoform:GGGGAAATCCTTACAAACTAAAATTTAGACTCAGATCGCCATCCATTCCCGCGCTTCGCTTGTACCTGTATTTGTATTGGGAGCTCTAGACACAGAGAAATGGCATGGTAAATCTCTTAAAACGAAGCTCAAATGGAGAATCCAGGATTTTCAAGGAAACAAATGGAGAATCCAAGCGATTTTTATACTTCGCTGATCAG
GGCCACCAAGACCTATGTCGGCAACGATCCTCTTTTACCATGGCTAGAAGGCATCAACAAAATCAAGGAGGTTCTTCAACCTGAGGTCGCCAAGCAGAAGTTACCTCGTTTCCTCGAGAAATGCGCACAAACGTTTCTGACTAGCAAACGTTACAAAAACGATCTGAGATACCTTCAAGTCTGGATTCAATTGCTTGAAT
TCGTGCCTAATCGGAGGGAGGCGCTATCGGTGATGGAGAATAATCAGATTGGACTGAAGCATGCTCTTTATTACCAAGCGTATGCGCTCCACTACGAGAAATTGAAAAAATTTCCAGAAGCCGACGCCATGTTCCGGCTGGGTATTCAAAGGTTTGCACATCCTACTGAGAGTTTGCATCAATCTTATGATGCCTTTCTT
GGACGTATGGCTTCTCGCAATAGAAGAAAACTGAAATCTCTGCAAGCGAGGTCAGAATTGCCCTCCAAAAACATTCATTATGAACCTAGGCATTTTGTAAGCCATGCAGACATGGGCATTAAAGgttggttcgtttcattttcctcatcatctttaaagcaacagtttaagtagtatccattcctagaggagctttgatt
tatgtaggtctattattcttattgatctttgttatataaaacaattatgaacatttgtgcttggacagAAGTTGGAAACGAGAAGGAGGTTTATCCAAAAGGTGAATATCAATTTGATGCTAATTCATCCTTAAATCATCAAGCTGAAATCTGCAATAATGTGGAGAAGAGCTGTCCAACTTGGAATTCAATAGCAGAAT
CTGCTAGCAACCCAGAATCAAGTACCAAGTGCAAAAACGATCAGGTCGAATGTTCAAGGTCTTGGAGTCCAGAAACATCGGAACAGAGATCTATTGTAGTATCTTCTGACAAATCGACTGGTCATGGTCAAATTTGTGATGAAGTTTCAATAAAATCTGGAAGATTATTTGACGGGACAAATTTACTGACCGTGGAAGAT
GGAGAAGCAAACAAAGAAAAAGTAGCCTCAGGAGTATATAACATAAGAGAGTTAGAGACAGTGGTTGATTCGAAAGCTACTCTGGTTTCTAATTCTAACTGTGAAGATACAATCAAGACATGTGAAAGCCTAGACTGTGCCGGTTTTTGTAGTACTAAAAAAGTAGAAGATGCATGCCACAATGTCCTTATTGATGCATG
CCAGTCACAGCATGTTGATAAACTCTTTAAAACAGGCTCATCCAAAAAAACCAACAGCACCATGCCAGCTGTCGAAATCATTCAGATATTGCCTGATGAAAGTTTGGAAGACCTAGCTTTGATACAGCAACCCAGTATTTCACGTGAATTCAAGGAAAATAATTCTTCTGTTCCAGCTGATAAGAAGTTAGGGGATTCTG
TACCTGCCAAAGGATTCAAGAAATTGAGTGATGAGTGTTTTGAAGGCAACCAAGAACAAAGACCCATAGAGGGTAATAGATCAAAGGATAACAGTTCTGCCTCCATACCAGCTGAAGTTTTCCAAGAAATTTCCATAGTGCACAGAGAGTTGAATAAAGAATGCAGAACTGGATTGGGGATAAAAAATCAGAGGCAATCA
GGTGAAGGTGCTTATACTATAGCTAGTTTTCCATCTAAGTCCTGTAGTGAAGACACAATCATTGTGCGCAAATTTGTGGATTCTGCTATTGTTTGTTATACAGGAAAAGTAGAGGATGCTTATCATCATGGTTTGGTAGAACCTACCATCAATACAAAAGAAGCTATGGCAGACATAAATGATATGTTTGGGAAACCACT
GAATTTTGAAAAATTAAGAACAGGAAATCGATCATGGAGAAGGCAAACAAATAAAGCCACTGAAAGCTTTCAGGTATTGGCTGATGAAGATTTGAAAAAGGCAGGTTCAACAAAGCAATGTCTTCTTTCTGATACACTGGAGGGACATACCTCTATTTCTTCATTTTCACAAGACTTGCAGGTATTTGTAGATGAAGATC
TCATGCACAGTTCCTCTAAAGAAGTTCCCAGTGTGACTAATTCATCTAAGAATCTTGCACCTGTCAAACACTTGCAAATATTGGCTGATAATAGTTTTAATGAGAACCAAAATGTATTATTCATGCAGAGGAATACATGTGAAGATGGGGAACTTTCCACTGTAGTGGAAGTTTTCCAAGATGGACTGGCCACAGAAGGA
AAATGGGACAAAAACGGGAGCAGTTCAGAGAGAGAAAATGGTCATGGACAGTTGGGAAATGCTGAAGAAGTGAGCATGCATTCCAAGTTTTCTGGTGAGGACACAATTGCGATACGCAAATTTGTAGATTCTGCTATAGATTATGATAGTAAAGAATTGGAAATTGCTTGTCATCATGGTCTTGTCGATCCTACCATTAA
TACAAAGGAAGCTATGGCAGAAATAAATGATATGTTTGGGAAACCACTGAATTTTGAAAAATCAAGACCAGGAAATCAACCATGCAGAAGGCAAACAAATAAACCCATCGAAATCTTCCAGGTATTGGCTGATGAATATTTGGAAGAGCCAGGTTCAACAGAGCAATGTCTTCTGTCTGATACACCGGAGGGACATACTT
CTATTTCTCCATTTTCAAAAGACTTGCAGGTATTTGTAGATGAAAATCTCATGCACAGTCCGTCTAAAGAAGTTCCCAGTATGACTAATTCATCTAAGAACATTGCACCTGTCAAAGGCTTGCAAATATTGGCTGATAATAGTTTTAACGAGAACCAAAATGTGATATTCATTCAGAGGAATACATGTGAAGATGGGGAA
CTTTCCACTGTCCAAGATGGACTAGCCACAGAAGGAAAATGGGACAAAAACAGTAGCAGTTCAGAAAGAAAAAGTGGTCATGGACAGTTGGGAAATGCTGAAGAAGTGAGCATGCATTCCAAGTTTTCTGGTGAGGACACAATTGCGATACGCAAATTTGTAGATTCTGCTATAGATGGTGATAGTAAAGAATTGGAGGT
TGCTTGTCATCATGGTCTTGTTGATCCAACCATTAATACAAAGGAAGCAATGGAAGAAATAAACAATATGTTTTGGAAACCACTGCAATTTGACAAATTAAAAGAAAGAAATCGACCAGCAGGAGTGGAAATTCTTAAGCAACCTACCGAAACCTTTCGGATATTTGCTGATGAAAACTTGGAAGAACAAGATTCTCCTG
TTTCATCTTTCAATGATTTTGAGGTTTTTATAGATGAGAATCTTATGAATGGTTCCTTGAAAAAACTTCCAAGAGAGTTGTCTTCATCTGTGAATCTTACACCTTTCCAAGGTTTGCAGATGTTATCTGATGAGAACTTTGAAAATAAGACATCCAGAGAGTGCAACACATTCAAAGATAAGGGACCCTATGTGCCAGTT
GAAGTATTTCAAGCCAGACAGGTCTCTGCTACAGTTAGTCTGCCTACTAATTCTAGCAGTGAAGACACAATTATCGTAAAAAAATTTGTAGATTCTGCTATTGTTGGTACTGAAGTAGAAGGTGCATGCCATCATGGTCTGGTTGAACCTACTATTAACACAAAGGAAGCCATGGCTGAGATCAATGATATGTTTGGGAA
ACCGTTGGATTTTCACAATACAAAAAGGAGTTGTACCCTGAAACCTGAAACAATTATGCAAACAGTTAAAAGCTCTCCAATATCAGCCAATGGAGATAGTGGGAAGAAAGGTTTGATGCAGCAGCATCATTTACCTGGTAATTTGGAGGAACACGATTCTGCCATTCCACTGGATAAAGGTTTTCAGATATTTATAGATG
AAGATGTACATTGTGAGTCTACAAAGAACCATAAAAAAAAATCCTGCCTGTCTAGGGACATTGCATATGGCCCAATTTTGACTAATGAAAGCTCTGTAGTCTTGCAAAAGAAGGCATCTATGGATTGTAATGTTTCTGAAAATGAGAATGTCTGTAAACCAGCTGAAGTTTTTCAGGTGTATATTGATGAACAATTTCAG
GACTAGGAGTGAATTAGTTGCAGTTTATGATACTCCTGTTCTAGCTTAGTTGATGGCTTAATTGTGCCTTCAAGAGTTTGAATGCTTCCGGAGCAATGGCATGTCTAGGTTTTAAGATAGCTTGTTGGTGCTTACAATGAACTGAATGCTCAAGGCAGCAAGCGGCAAGTTGCAACAAGTTTGAAGACATCCTTTTCTGG
TGGATGCGTTAATATATGCTGATACATGTTAAATATTTTTATATCAAGGTTGTTACTTCTTACTGAACATGTGGCTGGAATTTATTTTTGGATACTTATTATCAATATGACAGTCCAGAAAGATTCGGCTTTCTCTCTGATGGATTCAAGGATGGGGATCGACAATTGTATGGCAGTAGGAGAGGCTTCCAATGGGGGCA
AAACAATGTTCTCCCCGTGTCATTCACTAGCATCATAACTTTTAATCTTACGAATCCAATAATGATACTTGTTTCTTAGACAATGGTAAGGGTTCCTAAACCTGAGTAACATGTATCATGTCTCTGGTTTTTAGTCTCTTTACCTTGATTGTAACTAAGGACACTTTTCTATCATTTTGATGATATGTAAACATAACATC
TGACCTAGG
Intron 2 GTATTTGTAG ... ATTCATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 74.13 | 63 | 178 | 183 |
| A2 | 77.83 | 46 | 183 | 140 |
| A3 | 69.79 | 66 | 145 | 160 |
| A4 | 75.77 | 42 | 145 | 117.8 |
| A5 | 72.22 | 15 | 43 | 35 |
| A6 | 87.23 | 3 | 24 | 17 |
| A7 | 83.01 | 31 | 150 | 153 |
| A8 | 86.62 | 18 | 122 | 111 |
| A9 | 75.13 | 48 | 137 | 153 |
| A10 | 84.15 | 27 | 161 | 125.8 |
>TRINITY_DN129916_c3_g1_i2 from sample A1 / Example spliced isoformATCCTTACAAACTAAAATTTAGACTCAGATCGCCATCCATTCCCGCGCTTCGCTTGTACCTGTATTTGTATTGGGAGCTCTAGACACAGAGAAATGGCATGGTAAATCTCTTAAAACGAAGCTCAAATGGAGAATCCAGGATTTTCAAGGAAACAAATGGAGAATCCAAGCGATTTTTATACTTCGCTGATCAGGGCCAC
CAAGACCTATGTCGGCAACGATCCTCTTTTACCATGGCTAGAAGGCATCAACAAAATCAAGGAGGTTCTTCAACCTGAGGTCGCCAAGCAGAAGTTACCTCGTTTCCTCGAGAAATGCGCACAAACGTTTCTGACTAGCAAACGTTACAAAAACGATCTGAGATACCTTCAAGTCTGGATTCAATTGCTTGAATTCGTGC
CTAATCGGAGGGAGGCGCTATCGGTGATGGAGAATAATCAGATTGGACTGAAGCATGCTCTTTATTACCAAGCGTATGCGCTCCACTACGAGAAATTGAAAAAATTTCCAGAAGCCGACGCCATGTTCCGGCTGGGTATTCAAAGGTTTGCACATCCTACTGAGAGTTTGCATCAATCTTATGATGCCTTTCTTGGACGT
ATGGCTTCTCGCAATAGAAGAAAACTGAAATCTCTGCAAGCGAGGTCAGAATTGCCCTCCAAAAACATTCATTATGAACCTAGGCATTTTGTAAGCCATGCAGACATGGGCATTAAAGAAGTTGGAAACGAGAAGGAGGTTTATCCAAAAGGTGAATATCAATTTGATGCTAATTCATCCTTAAATCATCAAGCTGAAAT
CTGCAATAATGTGGAGAAGAGCTGTCCAACTTGGAATTCAATAGCAGAATCTGCTAGCAACCCAGAATCAAGTACCAAGTGCAAAAACGATCAGGTCGAATGTTCAAGGTCTTGGAGTCCAGAAACATCGGAACAGAGATCTATTGTAGTATCTTCTGACAAATCGACTGGTCATGGTCAAATTTGTGATGAAGTTTCAA
TAAAATCTGGAAGATTATTTGACGGGACAAATTTACTGACCGTGGAAGATGGAGAAGCAAACAAAGAAAAAGTAGCCTCAGGAGTATATAACATAAGAGAGTTAGAGACAGTGGTTGATTCGAAAGCTACTCTGGTTTCTAATTCTAACTGTGAAGATACAATCAAGACATGTGAAAGCCTAGACTGTGCCGGTTTTTGT
AGTACTAAAAAAGTAGAAGATGCATGCCACAATGTCCTTATTGATGCATGCCAGTCACAGCATGTTGATAAACTCTTTAAAACAGGCTCATCCAAAAAAACCAACAGCACCATGCCAGCTGTCGAAATCATTCAGATATTGCCTGATGAAAGTTTGGAAGACCTAGCTTTGATACAGCAACCCAGTATTTCACGTGAATT
CAAGGAAAATAATTCTTCTGTTCCAGCTGATAAGAAGTTAGGGGATTCTGTACCTGCCAAAGGATTCAAGAAATTGAGTGATGAGTGTTTTGAAGGCAACCAAGAACAAAGACCCATAGAGGGTAATAGATCAAAGGATAACAGTTCTGCCTCCATACCAGCTGAAGTTTTCCAAGAAATTTCCATAGTGCACAGAGAGT
TGAATAAAGAATGCAGAACTGGATTGGGGATAAAAAATCAGAGGCAATCAGGTGAAGGTGCTTATACTATAGCTAGTTTTCCATCTAAGTCCTGTAGTGAAGACACAATCATTGTGCGCAAATTTGTGGATTCTGCTATTGTTTGTTATACAGGAAAAGTAGAGGATGCTTATCATCATGGTTTGGTAGAACCTACCATC
AATACAAAAGAAGCTATGGCAGACATAAATGATATGTTTGGGAAACCACTGAATTTTGAAAAATTAAGAACAGGAAATCGATCATGGAGAAGGCAAACAAATAAAGCCACTGAAAGCTTTCAGGTATTGGCTGATGAAGATTTGAAAAAGGCAGGTTCAACAAAGCAATGTCTTCTTTCTGATACACTGGAGGGACATAC
CTCTATTTCTTCATTTTCACAAGACTTGCAGAGGAATACATGTGAAGATGGGGAACTTTCCACTGTAGTGGAAGTTTTCCAAGATGGACTGGCCACAGAAGGAAAATGGGACAAAAACGGGAGCAGTTCAGAGAGAGAAAATGGTCATGGACAGTTGGGAAATGCTGAAGAAGTGAGCATGCATTCCAAGTTTTCTGGTG
AGGACACAATTGCGATACGCAAATTTGTAGATTCTGCTATAGATTATGATAGTAAAGAATTGGAAATTGCTTGTCATCATGGTCTTGTCGATCCTACCATTAATACAAAGGAAGCTATGGCAGAAATAAATGATATGTTTGGGAAACCACTGAATTTTGAAAAATCAAGACCAGGAAATCAACCATGCAGAAGGCAAACA
GATAAACCCATCGAAATCTTCCAGGTATTGGCTGATGAATATTTGGAAGAGCCAGGTTCAACAGAGCAATGTCTTCTGTCTGATACACCGGAGGGACATACTTCTATTTCTCCATTTTCAAAAGACTTGCAGGTATTTGTAGATGAAAATCTCATGCACAGTCCGTCTAAAGAAGTTCCCAGTATGACTAATTCATCTAA
GAACATTGCACCTGTCAAAGGCTTGCAAATATTGGCTGATAATAGTTTTAACGAGAACCAAAATGTGATATTTATTCAGAGGAATACATGTGAAGATGGGGAACTTTCCACTGTCCAAGATGGACTAGCCACAGAAGGAAAATGGGACAAAAACAGTAGCAGTTCAGAAAGAAAAAGTGGTCATGGACAGTTGGGAAATG
CTGAAGAAGTGAGCATGCATTCCAAGTTTTCTGGTGAGGACACAATTGCGATACGCAAATTTGTAGATTCTGCTATAGATGGTGATAGTAAAGAATTGGAGGTTGCTTGTCATCATGGTCTTGTTGATCCAACCATTAATACAAAGGAAGCAATGGAAGAAATAAACAATATGTTTTGGAAACCACTGCAATTTGACAAA
TTAAAAGAAAGAAATCGACCAGCAGGAGTGGAAATTCTTAAGCAACCTACCGAAACCTTTCGGATATTTGCTGATGAAAACTTGGAAGAACAAGATTCTCCTGTTTCATCTTTCAATGATTTTGAGGTTTTTATAGATGAGAATCTTATGAATGGTTCCTTGAAAAAACTTCCAAGAGAGTTGTCTTCATCTGTGAATCT
TACACCTTTCCAAGGTTTGCAGATGTTATCTGATGAGAACTTTGAAAATAAGACATCCAGAGAGTGCAACACATTCAAAGATAAGGGACCCTATGTGCCAGTTGAAGTATTTCAAGCCAGACAGGTCTCTGCTACAGTTAGTCTGCCTACTAATTCTAGCAGTGAAGACACAATTATCGTAAAAAAATTTGTAGATTCTG
CTATTGTTGGTACTGAAGTAGAAGGTGCATGCCATCATGGTCTGGTTGAACCTACTATTAACACAAAGGAAGCCATGGCTGAGATCAATGATATGTTTGGGAAACCGTTGGATTTTCACAATACAAAAAGGAGTTGTACCCTGAAACCTGAAACAATTATGCAAACAGTTAAAAGCTCTCCAATATCAGCCAATGGAGAT
AGTGGGAAGAAAGGTTTGATGCAGCAGCATCATTTACCTGGTAATTTGGAGGAACACGATTCTGCCATTCCACTGGATAAAGGTTTTCAGATATTTATAGATGAAGATGTACATTGTGAGTCTACAAAGAACCATAAAAAAAAATCCTGCCTGTCTAGGGACATTGCATATGGCCCAATTTTGACTAATGAAAGCTCTGT
AGTCTTGCAAAAGAAGGCATCTATGGATTGTAATGTTTCTGAAAATGAGAATGTCTGTAAACCAGCTGAAGTTTTTCAGGTGTATATTGATGAACAATTTCAGGACTAGGAGTGAATTAGTTGCAGTTTATGATACTCCTGTTCTAGCTTAGTTGATGGCTTAATTGTGCCTTCAAGAGTTTGAATGCTTCCGGAGCAAT
GGCATGTCTAGGTTTTAAGATAGCTTGTTGGTGCTTACAATGAACTGAATGCTCAAGGCAGCAAGCGGCAAGTTGCAACAAGTTTGAAGACATCCTTTTCTGGTGGATGCGTTAATATATGCTGATACATGTTAAATATTTTTATATCAAGGTTGTTACTTCTTACTGAACATGTGGCTGGAATTTATTTTTGGATACTT
ATTATCAATATGACAGTCCAGAAAGATTCGGCTTTCTCTCTGATGGATTCAAGGATGGGGATCGACAATTGTATGGCAGTAGGAGAGGCTTCCAATGGGGGCAAAACAATGTTCTCCCCGTGTCATTCACTAGCATCATAACTTTTAATCTTACGAATCCAATAATGATACTTGTTTCTTAGACAATGGTAAGGGTTCCT
AAACCTGAGTAACATGTATCATGTCTCTGGTTTTTAGTCTCTTTACCTTGATTGTAACTAAGGACACTTTTCTATCATTTTGATGATATGTAAACATAACATCTGACCCAAGC
>TRINITY_DN129916_c3_g1_i1 from sample A1 / Example unspliced isoform:ATCCTTACAAACTAAAATTTAGACTCAGATCGCCATCCATTCCCGCGCTTCGCTTGTACCTGTATTTGTATTGGGAGCTCTAGACACAGAGAAATGGCATGGTAAATCTCTTAAAACGAAGCTCAAATGGAGAATCCAGGATTTTCAAGGAAACAAATGGAGAATCCAAGCGATTTTTATACTTCGCTGATCAGGGCCAC
CAAGACCTATGTCGGCAACGATCCTCTTTTACCATGGCTAGAAGGCATCAACAAAATCAAGGAGGTTCTTCAACCTGAGGTCGCCAAGCAGAAGTTACCTCGTTTCCTCGAGAAATGCGCACAAACGTTTCTGACTAGCAAACGTTACAAAAACGATCTGAGATACCTTCAAGTCTGGATTCAATTGCTTGAATTCGTGC
CTAATCGGAGGGAGGCGCTATCGGTGATGGAGAATAATCAGATTGGACTGAAGCATGCTCTTTATTACCAAGCGTATGCGCTCCACTACGAGAAATTGAAAAAATTTCCAGAAGCCGACGCCATGTTCCGGCTGGGTATTCAAAGGTTTGCACATCCTACTGAGAGTTTGCATCAATCTTATGATGCCTTTCTTGGACGT
ATGGCTTCTCGCAATAGAAGAAAACTGAAATCTCTGCAAGCGAGGTCAGAATTGCCCTCCAAAAACATTCATTATGAACCTAGGCATTTTGTAAGCCATGCAGACATGGGCATTAAAGAAGTTGGAAACGAGAAGGAGGTTTATCCAAAAGGTGAATATCAATTTGATGCTAATTCATCCTTAAATCATCAAGCTGAAAT
CTGCAATAATGTGGAGAAGAGCTGTCCAACTTGGAATTCAATAGCAGAATCTGCTAGCAACCCAGAATCAAGTACCAAGTGCAAAAACGATCAGGTCGAATGTTCAAGGTCTTGGAGTCCAGAAACATCGGAACAGAGATCTATTGTAGTATCTTCTGACAAATCGACTGGTCATGGTCAAATTTGTGATGAAGTTTCAA
TAAAATCTGGAAGATTATTTGACGGGACAAATTTACTGACCGTGGAAGATGGAGAAGCAAACAAAGAAAAAGTAGCCTCAGGAGTATATAACATAAGAGAGTTAGAGACAGTGGTTGATTCGAAAGCTACTCTGGTTTCTAATTCTAACTGTGAAGATACAATCAAGACATGTGAAAGCCTAGACTGTGCCGGTTTTTGT
AGTACTAAAAAAGTAGAAGATGCATGCCACAATGTCCTTATTGATGCATGCCAGTCACAGCATGTTGATAAACTCTTTAAAACAGGCTCATCCAAAAAAACCAACAGCACCATGCCAGCTGTCGAAATCATTCAGATATTGCCTGATGAAAGTTTGGAAGACCTAGCTTTGATACAGCAACCCAGTATTTCACGTGAATT
CAAGGAAAATAATTCTTCTGTTCCAGCTGATAAGAAGTTAGGGGATTCTGTACCTGCCAAAGGATTCAAGAAATTGAGTGATGAGTGTTTTGAAGGCAACCAAGAACAAAGACCCATAGAGGGTAATAGATCAAAGGATAACAGTTCTGCCTCCATACCAGCTGAAGTTTTCCAAGAAATTTCCATAGTGCACAGAGAGT
TGAATAAAGAATGCAGAACTGGATTGGGGATAAAAAATCAGAGGCAATCAGGTGAAGGTGCTTATACTATAGCTAGTTTTCCATCTAAGTCCTGTAGTGAAGACACAATCATTGTGCGCAAATTTGTGGATTCTGCTATTGTTTGTTATACAGGAAAAGTAGAGGATGCTTATCATCATGGTTTGGTAGAACCTACCATC
AATACAAAAGAAGCTATGGCAGACATAAATGATATGTTTGGGAAACCACTGAATTTTGAAAAATTAAGAACAGGAAATCGATCATGGAGAAGGCAAACAAATAAAGCCACTGAAAGCTTTCAGGTATTGGCTGATGAAGATTTGAAAAAGGCAGGTTCAACAAAGCAATGTCTTCTTTCTGATACACTGGAGGGACATAC
CTCTATTTCTTCATTTTCACAAGACTTGCAGgtatttgtagatgaagatctcatgcacagttcctctaaagaagttcccagtgtgactaattcatctaagaatcttgcacctgtcaaacacttgcaaatattggctgataatagttttaatgagaaccaaaatgtattattcatgcagAGGAATACATGTGAAGATGGGG
AACTTTCCACTGTAGTGGAAGTTTTCCAAGATGGACTGGCCACAGAAGGAAAATGGGACAAAAACGGGAGCAGTTCAGAGAGAGAAAATGGTCATGGACAGTTGGGAAATGCTGAAGAAGTGAGCATGCATTCCAAGTTTTCTGGTGAGGACACAATTGCGATACGCAAATTTGTAGATTCTGCTATAGATTATGATAGT
AAAGAATTGGAAATTGCTTGTCATCATGGTCTTGTCGATCCTACCATTAATACAAAGGAAGCTATGGCAGAAATAAATGATATGTTTGGGAAACCACTGAATTTTGAAAAATCAAGACCAGGAAATCAACCATGCAGAAGGCAAACAGATAAACCCATCGAAATCTTCCAGGTATTGGCTGATGAATATTTGGAAGAGCC
AGGTTCAACAGAGCAATGTCTTCTGTCTGATACACCGGAGGGACATACTTCTATTTCTCCATTTTCAAAAGACTTGCAGGTATTTGTAGATGAAAATCTCATGCACAGTCCGTCTAAAGAAGTTCCCAGTATGACTAATTCATCTAAGAACATTGCACCTGTCAAAGGCTTGCAAATATTGGCTGATAATAGTTTTAACG
AGAACCAAAATGTGATATTTATTCAGAGGAATACATGTGAAGATGGGGAACTTTCCACTGTCCAAGATGGACTAGCCACAGAAGGAAAATGGGACAAAAACAGTAGCAGTTCAGAAAGAAAAAGTGGTCATGGACAGTTGGGAAATGCTGAAGAAGTGAGCATGCATTCCAAGTTTTCTGGTGAGGACACAATTGCGATA
CGCAAATTTGTAGATTCTGCTATAGATGGTGATAGTAAAGAATTGGAGGTTGCTTGTCATCATGGTCTTGTTGATCCAACCATTAATACAAAGGAAGCAATGGAAGAAATAAACAATATGTTTTGGAAACCACTGCAATTTGACAAATTAAAAGAAAGAAATCGACCAGCAGGAGTGGAAATTCTTAAGCAACCTACCGA
AACCTTTCGGATATTTGCTGATGAAAACTTGGAAGAACAAGATTCTCCTGTTTCATCTTTCAATGATTTTGAGGTTTTTATAGATGAGAATCTTATGAATGGTTCCTTGAAAAAACTTCCAAGAGAGTTGTCTTCATCTGTGAATCTTACACCTTTCCAAGGTTTGCAGATGTTATCTGATGAGAACTTTGAAAATAAGA
CATCCAGAGAGTGCAACACATTCAAAGATAAGGGACCCTATGTGCCAGTTGAAGTATTTCAAGCCAGACAGGTCTCTGCTACAGTTAGTCTGCCTACTAATTCTAGCAGTGAAGACACAATTATCGTAAAAAAATTTGTAGATTCTGCTATTGTTGGTACTGAAGTAGAAGGTGCATGCCATCATGGTCTGGTTGAACCT
ACTATTAACACAAAGGAAGCCATGGCTGAGATCAATGATATGTTTGGGAAACCGTTGGATTTTCACAATACAAAAAGGAGTTGTACCCTGAAACCTGAAACAATTATGCAAACAGTTAAAAGCTCTCCAATATCAGCCAATGGAGATAGTGGGAAGAAAGGTTTGATGCAGCAGCATCATTTACCTGGTAATTTGGAGGA
ACACGATTCTGCCATTCCACTGGATAAAGGTTTTCAGATATTTATAGATGAAGATGTACATTGTGAGTCTACAAAGAACCATAAAAAAAAATCCTGCCTGTCTAGGGACATTGCATATGGCCCAATTTTGACTAATGAAAGCTCTGTAGTCTTGCAAAAGAAGGCATCTATGGATTGTAATGTTTCTGAAAATGAGAATG
TCTGTAAACCAGCTGAAGTTTTTCAGGTGTATATTGATGAACAATTTCAGGACTAGGAGTGAATTAGTTGCAGTTTATGATACTCCTGTTCTAGCTTAGTTGATGGCTTAATTGTGCCTTCAAGAGTTTGAATGCTTCCGGAGCAATGGCATGTCTAGGTTTTAAGATAGCTTGTTGGTGCTTACAATGAACTGAATGCT
CAAGGCAGCAAGCGGCAAGTTGCAACAAGTTTGAAGACATCCTTTTCTGGTGGATGCGTTAATATATGCTGATACATGTTAAATATTTTTATATCAAGGTTGTTACTTCTTACTGAACATGTGGCTGGAATTTATTTTTGGATACTTATTATCAATATGACAGTCCAGAAAGATTCGGCTTTCTCTCTGATGGATTCAAG
GATGGGGATCGACAATTGTATGGCAGTAGGAGAGGCTTCCAATGGGGGCAAAACAATGTTCTCCCCGTGTCATTCACTAGCATCATAACTTTTAATCTTACGAATCCAATAATGATACTTGTTTCTTAGACAATGGTAAGGGTTCCTAAACCTGAGTAACATGTATCATGTCTCTGGTTTTTAGTCTCTTTACCTTGATT
GTAACTAAGGACACTTTTCTATCATTTTGATGATATGTAAACATAACATCTGACCCAAGC