NA ----> NA
Intron 1 GTATGTCAGA ... AGTATTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 69.23 | 4 | 11 | 7 |
| A2 | 37.5 | 10 | 8 | 4 |
| A3 | 77.78 | 2 | 2 | 12 |
| A4 | 72.41 | 4 | 8 | 13 |
| A5 | 50 | 2 | 4 | 0 |
| A6 | 64.44 | 8 | 12 | 17 |
| A7 | 62.16 | 7 | 11 | 12 |
| A8 | 59.38 | 13 | 18 | 20 |
| A9 | 57.89 | 8 | 9 | 13 |
| A10 | 62.79 | 8 | 15 | 12 |
>TRINITY_DN41904_c1_g1_i3 from sample A6 / Example spliced isoformAGTGCAGATTCCAGACTTTGATAATCATAAGATTAAGGATGGTCTTTCTGTTATGGATGAAGATGGTGACAGTGATGACAGTGATGATGATGACTTTGATGATGATGACAATGATGAGGATGAAGATGAAGATGAAGAGAAGCAAACCAGAGATTCAGGATTGAAATTTGTAGTGAAGCAAGAGGAAAGTGAGTGTGAGG
GAACAGGATTTCAAGGACTAGAAGGACTGTCTAGTGTTTTGGAGGATGAGAAAGGTTTGGATATGAAGGTTGAGGTAAAGGAGGACCAAAATGATGAGGCCTTTCTACCAGTAGTAGGTTCACACAGGGAAGATGTGATTCGAGATAATAAAAAAATGAGAAAGAAGAACAAAAAGAACAAGGGAGGGAAGGAAAATAAA
AGTTGCAAGGATTTAATTGGCAAGAAGTTTTCTGGCTATGAGATTGAGCCCGTAAGAGGTCCAAATAATGTGTTGTCTTATAAAAAAGTTCCAAAAAAGGCATTTTGCCCAAAGGAGGTAAGGAGGATAATGGAATCAGGTGTACTTGACCTTAAAAATGCACAGTCACATACAATACGGAAAATTATAGTGTTTGCTTC
TCTTGGAATAAGGCACGGGTGTGAAGATATGTATGATTTGGACTTCAGTTATTTCAGTATTTTACGGAAAGGAGATCCCTATATATCTCCAAAGGATCCTGGGGAGCATGTATTATATGAGCAGCCTGGTGTCCGAAGAAAGATATTCTATCCCAACCAACAGAATCCAATACTTTGTCCAGTACAAATCCTTGAAGAGG
AGAAGGCAATGCGTCCTTCTGATCCAAGTTGTCCATCATGTCTGTTTCTTTGTATTAAATATGGTGGAAGGACAAGGAATCTTCCTCAAAATGAGTCAGATGAGGATGCTCAAGGGGAGGAATTGTTTCATCCATACCCAATGTTTTATACAGGAGCTATGATGAATGCACCCTCGCTGCCAGGAAATGAAGTTTCAGCA
TTAAGCAAAGCTTCTGGAAAAAGACAACCTCCTTTGCTTCTTAGCAAACCCAATAATATGTCACAGCAGGCAGTTTACTTGCCCCCTATTTCAGCAAGGTCTATGTCATCAGCACAATTCGGACCATTAGGCTTCCCTCCTGTTCCAGTGCCTTCTGGAGCTACTCTCCCTCCTCTTCCACATCCACTACTTCCATCTGC
ACCTTTGTCCACCTCTGAATTTGCTACCTCCAATGTTGCCACTACTTCAAGCATTCCCTCTTTTACTGGTCCATTTCCCCCTCCACCACCTTATGCTATATTCCCCCCTTATATCCTCCAACGTCCAGCAAATGGGTTTCTACCTGTGCCAATGTGGCATTTTGTAAATTCTTACCCTCCCAGTATGTATCCATCCTCTT
CGTTTGGATATCAATCCTTTGCACCTTCTTCACAGTATGGATCTCATGCCTCACAACCTTATTACAATCAACCCATTTCCTGTCCTTTTGCTTCTAATGTAAAGGAGGGAATGGGGAAGAAGGTTGATGAGTTAGATGAGTTAGACAGTGATTCAGAATGTAGTTCAAGTGAAGTAGACGAAAAATGTAACAAAGCTAAT
ATGTCAGAAAGCAAGGTGATGTAGAATGTTGAGCCGATACACACAACAGTGACTTACTTTGTTGTATAAAGTGAAGTTTTAGGGGTGCTTGCCCCTTATACAAAAAATGATCGAGATCCATTGCAATGAAGAGTTCAACTGATCTGGGCAAAATGGAATGATTCTCTCTCTCTCTCTCTCAAATATGTTCCATATATGAG
TCTTGACTCTTAATCTTTTACAGGCAGTTTTGTCTTCTCTTACGCTTGTTATTGACTGTTTCTTTTTTAAATTCTTGTGATTTGCTGCATGCACGTGATAATTTTTAGATGCAGAAGATATGGTTGAACTTGGACTCTGGGTTGCCTGATTGCAAACCAGTGTCTAGGAGTCACTTTTGCTGCTTATATTTGAATTATGT
AATGCGAACCTAAAAACGAAGATAGAGATGCCATGTTGCAATGTTTACCTGAATGTGCCCGTGTCTTAACATGGAAACATTGAGGTATCTTGCAATTTAAAATCATTGTTCCTTAACACTTACATCCGAAAGGGTGGATAAAATCCAGTTTGTATGTATCATGAAGATCCAGTAATAGTATGTTTGCTTGCAACCTTCTT
AATTTACTATCACAACTGAACTCAGGAGCTCGGTGTCCGTGC
>TRINITY_DN41904_c1_g1_i1 from sample A6 / Example unspliced isoform:AGTGCAGATTCCAGACTTTGATAATCATAAGATTAAGGATGGTCTTTCTGTTATGGATGAAGATGGTGACAGTGATGACAGTGATGATGATGACTTTGATGATGATGACAATGATGAGGATGAAGATGAAGATGAAGAGAAGCAAACCAGAGATTCAGGATTGAAATTTGTAGTGAAGCAAGAGGAAAGTGAGTGTGAGG
GAACAGGATTTCAAGGACTAGAAGGACTGTCTAGTGTTTTGGAGGATGAGAAAGGTTTGGATATGAAGGTTGAGGTAAAGGAGGACCAAAATGATGAGGCCTTTCTACCAGTAGTAGGTTCACACAGGGAAGATGTGATTCGAGATAATAAAAAAATGAGAAAGAAGAACAAAAAGAACAAGGGAGGGAAGGAAAATAAA
AGTTGCAAGGATTTAATTGGCAAGAAGTTTTCTGGCTATGAGATTGAGCCCGTAAGAGGTCCAAATAATGTGTTGTCTTATAAAAAAGTTCCAAAAAAGGCATTTTGCCCAAAGGAGGTAAGGAGGATAATGGAATCAGGTGTACTTGACCTTAAAAATGCACAGTCACATACAATACGGAAAATTATAGTGTTTGCTTC
TCTTGGAATAAGGCACGGGTGTGAAGATATGTATGATTTGGACTTCAGTTATTTCAGTATTTTACGGAAAGGAGATCCCTATATATCTCCAAAGGATCCTGGGGAGCATGTATTATATGAGCAGCCTGGTGTCCGAAGAAAGATATTCTATCCCAACCAACAGAATCCAATACTTTGTCCAGTACAAATCCTTGAAGAGG
AGAAGGCAATGCGTCCTTCTGATCCAAGTTGTCCATCATGTCTGTTTCTTTGTATTAAATATGGTGGAAGGACAAGGAATCTTCCTCAAAATGAgtatgtcagacaacgcatggggaggaataaattaaaatcttttgggccttcaatgtgtcaaatggcattgctagtgaatataagaactgggagtttttttttcaag
gccttgggcattacacttctttttatggctggattttcagaagaccttgtccagaaagaaacgaagtaccgtaacttggatctacttcagaagtattacagGTCAGATGAGGATGCTCAAGGGGAGGAATTGTTTCATCCATACCCAATGTTTTATACAGGACAGGCTATGATGAATGCACCCTCGCTGCCAGGAAATGA
AGTTTCAGCATTAAGCAAAGCTTCTGGAAAAAGACAACCTCCTTTGCTTCTTAGCAAACCCAATAATATGTCACAGCAGGCAGTTTACTTGCCCCCTATTTCAGCAAGGTCTATGTCATCAGCACAATTCGGACCATTAGGCTTCCCTCCTGTTCCAGTGCCTTCTGGAGCTACTCTCCCTCCTCTTCCACATCCACTAC
TTCCATCTGCACCTTTGTCCACCTCTGAATTTGCTACCTCCAATGTTGCCACTACTTCAAGCATTCCCTCTTTTACTGGTCCATTTCCCCCTCCACCACCTTATGCTATATTCCCCCCTTATATCCTCCAACGTCCAGCAAATGGGTTTCTACCTGTGCCAATGTGGCATTTTGTAAATTCTTACCCTCCCAGTATGTAT
CCATCCTCTTCGTTTGGATATCAATCCTTTGCACCTTCTTCACAGTATGGATCTCATGCCTCACAACCTTATTACAATCAACCCATTTCCTGTCCTTTTGCTTCTAATGTAAAGGAGGGAATGGGGAAGAAGGTTGATGAGTTAGATGAGTTAGACAGTGATTCAGAATGTAGTTCAAGTGAAGTAGACGAAAAATGTAA
CAAAGCTAATATGTCAGAAAGCAAGGTGATGTAGAATGTTGAGCCGATACACACAACAGTGACTTACTTTGTTGTATAAAGTGAAGTTTTAGGGGTGCTTGCCCCTTATACAAAAAATGATCGAGATCCATTGCAATGAAGAGTTCAACTGATCTGGGCAAAATGGAATGATTCTCTCTCTCTCTCTCTCAAATATGTTC
CATATATGAGTCTTGACTCTTAATCTTTTACAGGCAGTTTTGTCTTCTCTTACGCTTGTTATTGACTGTTTCTTTTTTAAATTCTTGTGATTTGCTGCATGCACGTGATAATTTTTAGATGCAGAAGATATGGTTGAACTTGGACTCTGGGTTGCCTGATTGCAAACCAGTGTCTAGGAGTCACTTTTGCTGCTTATATT
TGAATTATGTAATGCGAACCTAAAAACGAAGATAGAGATGCCATGTTGCAATGTTTACCTGAATGTGCCCGTGTCTTAACATGGAAACATTGAGGTATCTTGCAATTTAAAATCATTGTTCCTTAACACTTACATCCGAAAGGGTGGATAAAATCCAGTTTGTATGTATCATGAAGATCCAGTAATAGTATGTTTGCTTG
CAACCTTCTTAATTTACTATCACAACTGAACTCAGGAGCTCGGTGTCCGTGC