sp|F4I171|MD15A_ARATH ----> Mediator of RNA polymerase II transcription subunit 15a
Intron 1 GTTTGGGCAC ... CACATTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 8 | 5 | 3 |
| A2 | 15.56 | 19 | 6 | 1 |
| A3 | 39.13 | 7 | 4 | 5 |
| A4 | 28.57 | 15 | 8 | 4 |
| A5 | 33.33 | 2 | 0 | 2 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 31.25 | 11 | 8 | 2 |
| A8 | 63.64 | 2 | 3 | 4 |
| A9 | 33.33 | 10 | 8 | 2 |
| A10 | 30.77 | 9 | 6 | 2 |
>TRINITY_DN46008_c5_g1_i4 from sample A8 / Example spliced isoformATTGTACTCTGCATGGTATAGATTCATTCCTCTAGATATCCCCAGGCAGAAGAGAACTCATTCATTCGATTCATTAATTGAACGCAATCTCTATAACGACAACAGTGGCACCAATTGGAGGCTGATCACTCAGACAGATAACGTCTGCTCTGCTGTTGGCTACAGTGAAATGGAGGTCGATCCTAATTGGAGAAACGATT
TTCCCTTGGAATCCCGCCGAAGGATCGTCAATAGGATAAAGCACATCCTAGAGAGCTGCAAGCGAAAGAACAACAAGGGCATGGTTGAGCTGGAGAACGTTGCATTCATGTTTGAAAATAAGTTTTATTCTGCTGCGGCAAGTAAGGAAGATTATATGCTGAAAATTTCCTCCAGTCTGAAGAAACTCGAAACAAGAAGT
CAAGGACAAACAATAAATCCTTTGCCAGGCAACTCTTCTGGATGTGACCAAAAGTTGCCGGATTCAGCTACACCTGTCATCCAACCTAGCCAAGTTCAAGCTTGGCCACAGCTACTATCTGAAAATATGCAATCTAGCATTACACAGGGTTCAGCTGGTTTTGCATCTGCATTATCTACTATACCAGGATTGTCACAGGC
TGGAATACCTACAATTGGTGTACAGACGACTGGCATGACAAATATGTCAAGGGTATCCCAAATTTCTGTGAATAATTCAACAGGACAAGTTTTGTCCCAGAATACTCTGCTAGCAAACTCTCCAAGATGCCAGCTGCAAGCAAGACAACCTCAGCAGCAACAGAAACAAACACAATCTCAGCACCATTTGATATATCAAC
AGCAGCCACCTGCTGTTTTGATGCAGAATGTTCAAGCACAGTCCCATCTCCAGCCTTCAGTTCAGCAGCAGTCCCACCTCCAGCCTTCAGTTCAGCAGCAGTCGCAACCTCAACAGTCATTTCTTGAACAGAAACAACAGCATCAGCAACCACCTGCCCATGTTCAATTACCACAGCGAGTACAATCTGCTCAACAGTCC
ATCGTCCAATCATCTCAACAATCTGGCTACCAGCAAACTGCTGTTTTGCAACAAACTAAGCAACCTGTTCAACAGTCACAACAGTCCACCAGGCAAACAGTTACCCAGTTTGCTCTTCATCAGCTTCAGAAGCCTGTTCACAGGCAGAACCAGTCAGTACAACATTCTGTTGCACAGCAGCAACAGCCCATGGGTCAACA
GCCAGCTCTCCATTCACAGCATCAACATATGGGAAAACCAAATGATGTTCTGCATTCACAGCAACAGATTTTTGAGCATCCAAAGTCCGGTAATATGAATCAAACATTGCAGCCTTCACAAGCATTATTGCAGGCACACAGCCAGCATTCACAGCAGGAATTGCAAAAGTACCCACAACTTCATTCCCAGTTGCAGTCTC
AACCCCAACAATTACAGCAACAATCATTGTTGCAGCAACCACATTCAAACCAACAAGATTTGCAGTGCAGGGTTCAAACATCTGATTCCTTGTTACAGCAGCAGAACACTCCTGAACAGTATAATCAGCCTTCACAGCAAAGAGGGCTTCAGGACGTTTCTTCAACTTCTATCGATTCATCTGGTCAAACTGGATGGCGA
ACTGTTGATGATGAGGATCAGCAAGAGAAGATGTATCAGAAGCTACAAGGTTTAAAGGAGGCATATTATCCTAAATTAAAGGAAATGCATAACCAGCTTGTCGAAAGGTGTCAACAGTTTTTTCCAGGTGAGCAATTGGAAAGGATAAAAAAGATAAGGAATGTAGTACAACAATTAATGGCATATTTACAACAAAAGAG
AGATAATAGACAAGTGTTCAATGAAGACAAATTCCTTAAGCTTGAGAAGCAGATGAATTATTTTATAGATAATTATATGTCAAGGAAACCTATTTCACAGCAACATGAAGGACAACAGCAACTTCAATCACAGACTAGCAATAAAGTGCAACCTGTGAAACAGTCACCCCAGCCCCAAATACCTCAGGTTCAGCAACCAG
ACAAGAATGCTTTTCAACAACAGCAGCTCAGTTCACAGGCTTCTTTGGTACCAATACAGCATGGGTCTGGAAATATGTTACAGCAAACAGCTTCAATGTCATTACAGCAAAACATGATAAAATCAGTACCACTAAATAGCAATAGTTCCCAACAACAAAAGAGGGCCCTAGTGCAAAAGCAAGATCATCACCAGCATCTC
ATCCAAGCGAAACAACTAAAACAATTACAACAAAGCCAGAAGCAACATCCCTTGTTTCATCAGCAACATCAGCAGCAACAGATGCAACACCAACAGAAAAATCATCAAGTTGCTCAGCAGGCACAAACTAAGACACCGCAAACAGCACAAGTTCAATTGAGGAGTGATATAAATAGTGAAGTCAAGGCAAAACTGACTGC
TACATTCAAACCAGCATCTGTCAAACATCAGCAGCTTGGTCAAGTATCAGTTTATCAGCCACAAAAACAGCAGCATCAGCCGTTTAATGATACAGCATCATTGCCTTCCTCTTCACCACATCATTTTCAGGACTCTTGTCAAGTTTCTCAGCATTTTACTCCCCAGATAGATAAACAGAGTCTAATAACATCATCACCAC
AGTTACCCAAAGTTGAAACTCCTGTACAGCCTGCTGCGTCCCCTTGTTTGGCATCCTCACCTTCAACTCTTCCAATGCCTTCAACCCTAATGGAGAATGTTGATACGAAGTCCTCTCCTGTTGTTTATTCTGTCTCAAATACTGGAAGTGCTCAGGGTCTTCAGCAGTCAGTTACTACATCTGCCAATGGTCAGACTCTA
ACTATTGGCACGCCAGGAATTTCTGCTTCTCCTCTTTTGGGCACATCCTCTCCAAACCTTGCACAAAATCTTGTCAGTCAGGATGGATCTCAAACTATGTCTCCTGGGTTTATGACGGATGGAAAACAAGCTGCAGAGGCTCCCATTGAGCGTCTGGTCAAAAGGATCCGATCGATGTCCCCAGTGACCTTCAACTCTGC
AGTGAGTGATTTGCATGCAGTATACAATTTGTACGATAGCATGGTGGGTTCTGCGCCAGGTAGAAGGTCCAATGCTGCTATTGGGGAGGACCTTGTTGCTATGACAAGGTGTCGTTTGCAGGCAAGTAATTTCATGTCACTGGATAGCAGTGCTACAAGGAGAGTGAGGCATTGTATGAGTTCATTGCCTCTCACTGTTG
CATCTTCAGGTAGAAGTTTGGATGACAGTCCTCATCAGATGACAGATCTGGAGTCTTCTGAAATGCTCTCGACAGCAACATCGACTGCTAAAAGGCCTAGGCTTGAGCTTGATCGTGTTTTGCAGCTTGAAATTCGGGATGTGAATAAACAATTGATTGAGACTGTGGTGGATTTAAGTGATAATGATATTGATTCTGCT
TCCTGTGGAGGGAGTGATGGAATTGTCGTCAAATGTTCCTATAATGCAATGGCATTTCGTACAAGATTGAACTCTGGATACAAACAGGCCCATAAGTCACTAATTTCACCATTATGGCTGCTGATTCCTTTGAGCTACCCGAAGTGTTCTCCTGTAGTTCTAAACAGATTTCCAGTTGAAACAGTTGAAACAATCAAGGA
TCACGAAGACCAAGACCTTTCATTGAAAACAAAAGCTCTGTTCGATGTATCTGTTTGTAATCTCCCAGAACCAATGACATTGGGAACTCTGGCAAGAACATGGGATGTTTGTGCTCGCAATGTAGTAGCTGAATATGCACATCAGATGGGAGGGGGTAACTTCAGTTCAAAATATGGTGCATGGGAATATTGTATAAGTG
CCTGAACTTGCCATCTTGAAAGTTGAAACTACTAGCTTCTGTGGTCTCCATATGTTAACTGATCAAGAATTGCTGGCTTACGATGCCTGAATATATTAGTAGTACTAGTAACATGCTGATTTTAGTTATTGGAACCTGATATCTACCATCTTCTCTTTTAGCCATTAAAATAATCATAAAGATCTGATGTGTATAGATTG
ATACACCCCTTGGGGTGGAACGGACTACAGTTTGAACAGAACACTGTGGCCCTCTTGCTTATGCAATAAAAGTCACCGGAATTGTGCAAGAACTTGCACATAATGTTCTTTAACAGGTAGCTGGTATAGTCTCCATATAGAATTGATTAGTCTGTATTAAATACTTTGTATGTTAGAATAAACTATCTTCTGTGGTCTCC
ATATGTTAACTGATCAAGAATTGCTGGCTTA
>TRINITY_DN46008_c5_g1_i2 from sample A8 / Example unspliced isoform:ATTGTACTCTGCATGGTATAGATTCATTCCTCTAGATATCCCCAGGCAGAAGAGAACTCATTCATTCGATTCATTAATTGAACGCAATCTCTATAACGACAACAGTGGCACCAATTGGAGGCTGATCACTCAGACAGATAACGTCTGCTCTGCTGTTGGCTACAGTGAAATGGAGGTCGATCCTAATTGGAGAAACGATT
TTCCCTTGGAATCCCGCCGAAGGATCGTCAATAGGATAAAGCACATCCTAGAGAGCTGCAAGCGAAAGAACAACAAGGGCATGGTTGAGCTGGAGAACGTTGCATTCATGTTTGAAAATAAGTTTTATTCTGCTGCGGCAAGTAAGGAAGATTATATGCTGAAAATTTCCTCCAGTCTGAAGAAACTCGAAACAAGAAGT
CAAGGACAAACAATAAATCCTTTGCCAGGCAACTCTTCTGGATGTGACCAAAAGTTGCCGGATTCAGgtttgggcacatattaaaacataatgtttggagtagataactccgattttaagtttttctacggtggcatgttaacataatatggagttggagaagtgtaggttgtcatttagattttgttccagggagctct
tctctcaaatctcagtatttttcttaaagtagtgatgttgacaagcttttttgttgctgttccaccacattttagCTACACCTGTCATCCAACCTAGCCAAGTTCAAGCTTGGCCACAGCTACTATCTGAAAATATGCAATCTAGCATTACACAGGGTTCAGCTGGTTTTGCATCTGCATTATCTACTATACCAGGATTG
TCACAGGCTGGAATACCTACAATTGGTGTACAGACGACTGGCATGACAAATATGTCAAGGGTATCCCAAATTTCTGTGAATAATTCAACAGGACAAGTTTTGTCCCAGAATACTCTGCTAGCAAACTCTCCAAGATGCCAGCTGCAAGCAAGACAACCTCAGCAGCAACAGAAACAAACACAATCTCAGCACCATTTGAT
ATATCAACAGCAGCCACCTGCTGTTTTGATGCAGAATGTTCAAGCACAGTCCCATCTCCAGCCTTCAGTTCAGCAGCAGTCCCACCTCCAGCCTTCAGTTCAGCAGCAGTCGCAACCTCAACAGTCATTTCTTGAACAGAAACAACAGCATCAGCAACCACCTGCCCATGTTCAATTACCACAGCGAGTACAATCTGCTC
AACAGTCCATCGTCCAATCATCTCAACAATCTGGCTACCAGCAAACTGCTGTTTTGCAACAAACTAAGCAACCTGTTCAACAGTCACAACAGTCCACCAGGCAAACAGTTACCCAGTTTGCTCTTCATCAGCTTCAGAAGCCTGTTCACAGGCAGAACCAGTCAGTACAACATTCTGTTGCACAGCAGCAACAGCCCATG
GGTCAACAGCCAGCTCTCCATTCACAGCATCAACATATGGGAAAACCAAATGATGTTCTGCATTCACAGCAACAGATTTTTGAGCATCCAAAGTCCGGTAATATGAATCAAACATTGCAGCCTTCACAAGCATTATTGCAGGCACACAGCCAGCATTCACAGCAGGAATTGCAAAAGTACCCACAACTTCATTCCCAGTT
GCAGTCTCAACCCCAACAATTACAGCAACAATCATTGTTGCAGCAACCACATTCAAACCAACAAGATTTGCAGTGCAGGGTTCAAACATCTGATTCCTTGTTACAGCAGCAGAACACTCCTGAACAGTATAATCAGCCTTCACAGCAAAGAGGGCTTCAGGACGTTTCTTCAACTTCTATCGATTCATCTGGTCAAACTG
GATGGCGAACTGTTGATGATGAGGATCAGCAAGAGAAGATGTATCAGAAGCTACAAGGTTTAAAGGAGGCATATTATCCTAAATTAAAGGAAATGCATAACCAGCTTGTCGAAAGGTGTCAACAGTTTTTTCCAGGTGAGCAATTGGAAAGGATAAAAAAGATAAGGAATGTAGTACAACAATTAATGGCATATTTACAA
CAAAAGAGAGATAATAGACAAGTGTTCAATGAAGACAAATTCCTTAAGCTTGAGAAGCAGATGAATTATTTTATAGATAATTATATGTCAAGGAAACCTATTTCACAGCAACATGAAGGACAACAGCAACTTCAATCACAGACTAGCAATAAAGTGCAACCTGTGAAACAGTCACCCCAGCCCCAAATACCTCAGGTTCA
GCAACCAGACAAGAATGCTTTTCAACAACAGCAGCTCAGTTCACAGGCTTCTTTGGTACCAATACAGCATGGGTCTGGAAATATGTTACAGCAAACAGCTTCAATGTCATTACAGCAAAACATGATAAAATCAGTACCACTAAATAGCAATAGTTCCCAACAACAAAAGAGGGCCCTAGTGCAAAAGCAAGATCATCACC
AGCATCTCATCCAAGCGAAACAACTAAAACAATTACAACAAAGCCAGAAGCAACATCCCTTGTTTCATCAGCAACATCAGCAGCAACAGATGCAACACCAACAGAAAAATCATCAAGTTGCTCAGCAGGCACAAACTAAGACACCGCAAACAGCACAAGTTCAATTGAGGAGTGATATAAATAGTGAAGTCAAGGCAAAA
CTGACTGCTACATTCAAACCAGCATCTGTCAAACATCAGCAGCTTGGTCAAGTATCAGTTTATCAGCCACAAAAACAGCAGCATCAGCCGTTTAATGATACAGCATCATTGCCTTCCTCTTCACCACATCATTTTCAGGACTCTTGTCAAGTTTCTCAGCATTTTACTCCCCAGATAGATAAACAGAGTCTAATAACATC
ATCACCACAGTTACCCAAAGTTGAAACTCCTGTACAGCCTGCTGCGTCCCCTTGTTTGGCATCCTCACCTTCAACTCTTCCAATGCCTTCAACCCTAATGGAGAATGTTGATACGAAGTCCTCTCCTGTTGTTTATTCTGTCTCAAATACTGGAAGTGCTCAGGGTCTTCAGCAGTCAGTTACTACATCTGCCAATGGTC
AGACTCTAACTATTGGCACGCCAGGAATTTCTGCTTCTCCTCTTTTGGGCACATCCTCTCCAAACCTTGCACAAAATCTTGTCAGTCAGGATGGATCTCAAACTATGTCTCCTGGGTTTATGACGGATGGAAAACAAGCTGCAGAGGCTCCCATTGAGCGTCTGGTCAAAAGGATCCGATCGATGTCCCCAGTGACCTTC
AACTCTGCAGTGAGTGATTTGCATGCAGTATACAATTTGTACGATAGCATGGTGGGTTCTGCGCCAGGTAGAAGGTCCAATGCTGCTATTGGGGAGGACCTTGTTGCTATGACAAGGTGTCGTTTGCAGGCAAGTAATTTCATGTCACTGGATAGCAGTGCTACAAGGAGAGTGAGGCATTGTATGAGTTCATTGCCTCT
CACTGTTGCATCTTCAGGTAGAAGTTTGGATGACAGTCCTCATCAGATGACAGATCTGGAGTCTTCTGAAATGCTCTCGACAGCAACATCGACTGCTAAAAGGCCTAGGCTTGAGCTTGATCGTGTTTTGCAGCTTGAAATTCGGGATGTGAATAAACAATTGATTGAGACTGTGGTGGATTTAAGTGATAATGATATTG
ATTCTGCTTCCTGTGGAGGGAGTGATGGAATTGTCGTCAAATGTTCCTATAATGCAATGGCATTTCGTACAAGATTGAACTCTGGATACAAACAGGCCCATAAGTCACTAATTTCACCATTATGGCTGCTGATTCCTTTGAGCTACCCGAAGTGTTCTCCTGTAGTTCTAAACAGATTTCCAGTTGAAACAGTTGAAACA
ATCAAGGATCACGAAGACCAAGACCTTTCATTGAAAACAAAAGCTCTGTTCGATGTATCTGTTTGTAATCTCCCAGAACCAATGACATTGGGAACTCTGGCAAGAACATGGGATGTTTGTGCTCGCAATGTAGTAGCTGAATATGCACATCAGATGGGAGGGGGTAACTTCAGTTCAAAATATGGTGCATGGGAATATTG
TATAAGTGCCTGAACTTGCCATCTTGAAAGTTGAAACTACTAGCTTCTGTGGTCTCCATATGTTAACTGATCAAGAATTGCTGGCTTACGATGCCTGAATATATTAGTAGTACTAGTAACATGCTGATTTTAGTTATTGGAACCTGATATCTACCATCTTCTCTTTTAGCCATTAAAATAATCATAAAGATCTGATGTGT
ATAGATTGATACACCCCTTGGGGTGGAACGGACTACAGTTTGAACAGAACACTGTGGCCCTCTTGCTTATGCAATAAAAGTCACCGGAATTGTGCAAGAACTTGCACATAATGTTCTTTAACAGGTAGCTGGTATAGTCTCCATATAGAATTGATTAGTCTGTATTAAATACTTTGTATGTTAGAATAAACTATCTTCTG
TGGTCTCCATATGTTAACTGATCAAGAATTGCTGGCTTA
Intron 2 GCAAGTAATT ... GCATCTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70.31 | 3.4 | 9 | 7 |
| A2 | 80.88 | 2.2 | 11 | 6 |
| A3 | 75.94 | 2.4 | 7 | 8 |
| A4 | 72.12 | 1.4 | 4 | 3 |
| A5 | 100 | 0 | 2 | 1 |
| A6 | 76.47 | 4 | 10 | 16 |
| A7 | 57.52 | 14.8 | 16 | 24 |
| A8 | 56.05 | 20.8 | 24 | 29 |
| A9 | 71.01 | 12.2 | 31 | 27 |
| A10 | 72.39 | 5.4 | 13 | 13 |
>TRINITY_DN116749_c5_g5_i2 from sample A1 / Example spliced isoformTATTGTACTCTGCATGGTATAGATTCATTCCTCTAGATATCCCCAGGCAGAAGAGAACTCATTCATTCGATTCATTAATTGAACGCAATCTCTATAACGACAACAGTGGCACCAATTGGAGGCTGATCACTCAGACAGATAACGTCTGCTCTGCTGTTGGCTACAGTGAAATGGAGGTCGATCCTAATTGGAGAAACGAT
TTTCCCTTGGAATCCCGCCGAAGGATCGTCAATAGGATAAAGCACATCCTAGAGAGCTGCAAGCGAAAGAACAACAAGGGCATGGTTGAGCTGGAGAACGTTGCATTCATGTTTGAAAATAAGTTTTATTCTGCTGCGGCAAGTAAGGAAGATTATATGCTGAAAATTTCCTCCAGTCTGAAGAAACTCGAAACAAGAAG
TCAAGGACAAACAATAAATCCTTTGCCAGGCAACTCTTCTGGATGTGACCAAAAGTTGCCGGATTCAGCTACACCTGTCATCCAACCTAGCCAAGTTCAAGCTTGGCCACAGCTACTATCTGAAAATATGCAATCTAGCATTACACAGGGTTCAGCTGGTTTTGCATCTGCATTATCTACTATACCAGGATTGTCACAGG
CTGGAATACCTACAATTGGTGTACAGACGACTGGCATGACAAATATGTCAAGGGTATCCCAAATTTCTGTGAATAATTCAACAGGACAAGTTTTGTCCCAGAATACTCTGCTAGCAAACTCTCCAAGATGCCAGCTGCAAGCAAGACAACCTCAGCAGCAACAGAAACAAACACAATCTCAGCACCATTTGATATATCAA
CAGCAGCCACCTGCTGTTTTGATGCAGAATGTTCAAGCACAGTCCCATCTCCAGCCTTCAGTTCAGCAGCAGTCCCACCTCCAGCCTTCAGTTCAGCAGCAGTCGCAACCTCAACAGTCATTTCTTGAACAGAAACAACAGCATCAGCAACCACCTGCCCATGTTCAATTACCACAGCGAGTACAATCTGCTCAACAGTC
CATCGTCCAATCATCTCAACAATCTGGCTACCAGCAAACTGCTGTTTTGCAACAAACTAAGCAACCTGTTCAACAGTCACAACAGTCCACCAGGCAAACAGTTACCCAGTTTGCTCTTCATCAGCTTCAGAAGCCTGTTCACAGGCAGAACCAGTCAGTACAACATTCTGTTGCACAGCAGCAACAGCCCATGGGTCAAC
AGCCAGCTCTCCATTCACAGCATCAACATATGGGAAAACCAAATGATGTTCTGCATTCACAGCAACAGATTTTTGAGCATCCAAAGTCCGGTAATATGAATCAAACATTGCAGCCTTCACAAGCATTATTGCAGGCACACAGCCAGCATTCACAGCAGCAATTGCAAAAGTACCCACAACTTCATTCCCAGTTGCAGTCT
CAACCCCAACAATTACAGCAACAATCATTGTTGCAGCAACCACATTCAAACCAACAAGATTTGCAGTGCAGGGTTCAAACATCTGATTCCTTGTTACAGCAGCAGAACACTCCTGAACAGTATAATCAGCCTTCACAGCAAAGAGGGCTTCAGGACGTTTCTTCAACTTCTATCGATTCATCTGGTCAAACTGGATGGCG
AACTGTTGATGATGAGGATCAGCAAGAGAAGATGTATCAGAAGCTACAAGGTTTAAAGGAGGCATATTATCCTAAATTAAAGGAAATGCATAACCAGCTTGTCGAAAGGTGTCAACAGTTTTTTCCAGGTGAGCAATTGGAAAGGATAAAAAAGATAAGGAATGTAGTACAACAATTAATGGCATATTTACAACAAAAGA
GAGATAATAGACAAGTGTTCAATGAAGACAAATTCCTTAAGCTTGAGAAGCAGATGAATTATTTTATAGATAATTATATGTCAAGGAAACCTATTTCACAGCAACATGAAGGACAACAGCAACTTCAATCACAGACTAGCAATAAAGTGCAACCTGTGAAACAGTCACCCCAGCCCCAAATACCTCAGGTTCAGCAACCA
GACAAGAATGCTTTTCAACAACAGCAGCTCAGTTCACAGGCTTCTTTGGTACCAATACAGCATGGGTCTGGAAATATGTTACAGCAAACAGCTTCAATGTCATTACAGCAAAACATGATAAAATCAGTACCACTAAATAGCAATAGTTCCCAACAACAAAAGAGGGCCCTAGTGCAAAAGCAAGATCATCACCAGCATCT
CATCCAAGCGAAACAACTAAAACAATTACAACAAAGCCAGAAGCAACATCCCTTGTTTCATCAGCAACATCAGCAGCAACAGATGCAACACCAACAGAAAAATCATCAAGTTGCTCAGCAGGCACAAACTAAGACACCGCAAACAGCACAAGTTCAATTGAGGAGTGATATAAATAGTGAAGTCAAGGCAAAACTGACTG
CTACATTCAAACCAGCATCTGTCAAACATCAGCAGCTTGGTCAAGTATCAGTTTATCAGCCACAAAAACAGCAGCATCAGCCGTTTAATGATACAGCATCATTGCCTTCCTCTTCACCACATCATTTTCAGGACTCTTGTCAAGTTTCTCAGCATTTTACTCCCCAGATAGATAAACAGAGTCTAATAACATCATCACCA
CAGTTACCCAAAGTTGAAACTCCTGTACAGCCTGCTGCGTCCCCTTGTTTGGCATCCTCACCTTCAACTCTTCCAATGCCTTCAACCCTAATGGAGAATGTTGATACGAAGTCCTCTCCTGTTGTTTATTCTGTCTCAAATACTGGAAGTGCTCAGGGTCTTCAGCAGTCAGTTACTACATCTGCCAATGGTCAGACTCT
AACTATTGGCACGCCAGGAATTTCTGCTTCTCCTCTTTTGGGCACATCCTCTCCAAACCTTGCACAAAATCTTGTCAGTCAGGATGGATCTCAAACTATGTCTCCTGGGTTTATGACGGATGGAAAACAAGCTGCAGAGGCTCCCATTGAGCGTCTGGTCAAAAGGATCCGATCGATGTCCCCAGTGACCTTCAACTCTG
CAGTGAGTGATTTGCATGCAGTATACAATTTGTACGATAGCATGGTGGGTTCTGCGCCAGGTAGAAGGTCCAATGCTGCTATTGGGGAGGACCTTGTTGCTATGACAAGGTGTCGTTTGCAGGTAGAAGTTTGGATGACAGTCCTCATCAGATGACAGATCTGGAGTCTTCTGAAATGCTCTCGACAGCAACATCGACTG
CTAAAAGGCCTAGGCTTGAGCTTGATCGTGTTTTGCAGCTTGAAATTCGGGATGTGAATAAACAATTGATTGAGACTGTGGTGGATTTAAGTGATAATGATATTGATTCTGCTTCCTGTGGAGGGAGTGATGGAATTGTCGTCAAATGTTCCTATAATGCAATGGCATTTCGTACAAGATTGAACTCTGGATACAAACAG
GCCCATAAGTCACTAATTTCACCATTATGGCTGCTGATTCCTTTGAGCTACCCGAAGTGTTCTCCTGTAGTTCTAAACAGATTTCCAGTTGAAACAGTTGAAACAATCAAGGATCACGAAGACCAAGACCTTTCATTGAAAACAAAAGCTCTGTTCGATGTATCTGTTTGTAATCTCCCAGAACCAATGACATTGGGAAC
TCTGGCAAGAACATGGGATGTTTGTGCTCGCAATGTAGTAGCTGAATATGCACATCAGATGGGAGGGGGTAACTTCAGTTCAAAATATGGTGCATGGGAATATTGTATAAGTGCCTGAACTTGCCATCTTGAAAGTTGAAACTACTAGCTTCTGTGGTCTCCATATGTTAACTGATCAAGAATTGCTGGCTTACGATGCC
TGAATATATTAGTAGTACTAGTAACATGCTGATTTTAGTTATTGGAACCTGATATCTACCATCTTCTCTTTTAGCCATTAAAATAATCATAAAGATCTGATGTGTATAGATTGATACACCCCTTGGGGTGGAACGGACTACAGTTTGAACAGAACACTGTGGCCCTCTTGCTTATGCAATAAAAGTCACCGGAATTGTGC
AAGAACTTGCACATAATGTTCTTTAACAGGTAGCTGGTATAGTCTCC
>TRINITY_DN116749_c5_g5_i3 from sample A1 / Example unspliced isoform:TATTGTACTCTGCATGGTATAGATTCATTCCTCTAGATATCCCCAGGCAGAAGAGAACTCATTCATTCGATTCATTAATTGAACGCAATCTCTATAACGACAACAGTGGCACCAATTGGAGGCTGATCACTCAGACAGATAACGTCTGCTCTGCTGTTGGCTACAGTGAAATGGAGGTCGATCCTAATTGGAGAAACGAT
TTTCCCTTGGAATCCCGCCGAAGGATCGTCAATAGGATAAAGCACATCCTAGAGAGCTGCAAGCGAAAGAACAACAAGGGCATGGTTGAGCTGGAGAACGTTGCATTCATGTTTGAAAATAAGTTTTATTCTGCTGCGGCAAGTAAGGAAGATTATATGCTGAAAATTTCCTCCAGTCTGAAGAAACTCGAAACAAGAAG
TCAAGGACAAACAATAAATCCTTTGCCAGGCAACTCTTCTGGATGTGACCAAAAGTTGCCGGATTCAGCTACACCTGTCATCCAACCTAGCCAAGTTCAAGCTTGGCCACAGCTACTATCTGAAAATATGCAATCTAGCATTACACAGGGTTCAGCTGGTTTTGCATCTGCATTATCTACTATACCAGGATTGTCACAGG
CTGGAATACCTACAATTGGTGTACAGACGACTGGCATGACAAATATGTCAAGGGTATCCCAAATTTCTGTGAATAATTCAACAGGACAAGTTTTGTCCCAGAATACTCTGCTAGCAAACTCTCCAAGATGCCAGCTGCAAGCAAGACAACCTCAGCAGCAACAGAAACAAACACAATCTCAGCACCATTTGATATATCAA
CAGCAGCCACCTGCTGTTTTGATGCAGAATGTTCAAGCACAGTCCCATCTCCAGCCTTCAGTTCAGCAGCAGTCCCACCTCCAGCCTTCAGTTCAGCAGCAGTCGCAACCTCAACAGTCATTTCTTGAACAGAAACAACAGCATCAGCAACCACCTGCCCATGTTCAATTACCACAGCGAGTACAATCTGCTCAACAGTC
CATCGTCCAATCATCTCAACAATCTGGCTACCAGCAAACTGCTGTTTTGCAACAAACTAAGCAACCTGTTCAACAGTCACAACAGTCCACCAGGCAAACAGTTACCCAGTTTGCTCTTCATCAGCTTCAGAAGCCTGTTCACAGGCAGAACCAGTCAGTACAACATTCTGTTGCACAGCAGCAACAGCCCATGGGTCAAC
AGCCAGCTCTCCATTCACAGCATCAACATATGGGAAAACCAAATGATGTTCTGCATTCACAGCAACAGATTTTTGAGCATCCAAAGTCCGGTAATATGAATCAAACATTGCAGCCTTCACAAGCATTATTGCAGGCACACAGCCAGCATTCACAGCAGCAATTGCAAAAGTACCCACAACTTCATTCCCAGTTGCAGTCT
CAACCCCAACAATTACAGCAACAATCATTGTTGCAGCAACCACATTCAAACCAACAAGATTTGCAGTGCAGGGTTCAAACATCTGATTCCTTGTTACAGCAGCAGAACACTCCTGAACAGTATAATCAGCCTTCACAGCAAAGAGGGCTTCAGGACGTTTCTTCAACTTCTATCGATTCATCTGGTCAAACTGGATGGCG
AACTGTTGATGATGAGGATCAGCAAGAGAAGATGTATCAGAAGCTACAAGGTTTAAAGGAGGCATATTATCCTAAATTAAAGGAAATGCATAACCAGCTTGTCGAAAGGTGTCAACAGTTTTTTCCAGGTGAGCAATTGGAAAGGATAAAAAAGATAAGGAATGTAGTACAACAATTAATGGCATATTTACAACAAAAGA
GAGATAATAGACAAGTGTTCAATGAAGACAAATTCCTTAAGCTTGAGAAGCAGATGAATTATTTTATAGATAATTATATGTCAAGGAAACCTATTTCACAGCAACATGAAGGACAACAGCAACTTCAATCACAGACTAGCAATAAAGTGCAACCTGTGAAACAGTCACCCCAGCCCCAAATACCTCAGGTTCAGCAACCA
GACAAGAATGCTTTTCAACAACAGCAGCTCAGTTCACAGGCTTCTTTGGTACCAATACAGCATGGGTCTGGAAATATGTTACAGCAAACAGCTTCAATGTCATTACAGCAAAACATGATAAAATCAGTACCACTAAATAGCAATAGTTCCCAACAACAAAAGAGGGCCCTAGTGCAAAAGCAAGATCATCACCAGCATCT
CATCCAAGCGAAACAACTAAAACAATTACAACAAAGCCAGAAGCAACATCCCTTGTTTCATCAGCAACATCAGCAGCAACAGATGCAACACCAACAGAAAAATCATCAAGTTGCTCAGCAGGCACAAACTAAGACACCGCAAACAGCACAAGTTCAATTGAGGAGTGATATAAATAGTGAAGTCAAGGCAAAACTGACTG
CTACATTCAAACCAGCATCTGTCAAACATCAGCAGCTTGGTCAAGTATCAGTTTATCAGCCACAAAAACAGCAGCATCAGCCGTTTAATGATACAGCATCATTGCCTTCCTCTTCACCACATCATTTTCAGGACTCTTGTCAAGTTTCTCAGCATTTTACTCCCCAGATAGATAAACAGAGTCTAATAACATCATCACCA
CAGTTACCCAAAGTTGAAACTCCTGTACAGCCTGCTGCGTCCCCTTGTTTGGCATCCTCACCTTCAACTCTTCCAATGCCTTCAACCCTAATGGAGAATGTTGATACGAAGTCCTCTCCTGTTGTTTATTCTGTCTCAAATACTGGAAGTGCTCAGGGTCTTCAGCAGTCAGTTACTACATCTGCCAATGGTCAGACTCT
AACTATTGGCACGCCAGGAATTTCTGCTTCTCCTCTTTTGGGCACATCCTCTCCAAACCTTGCACAAAATCTTGTCAGTCAGGATGGATCTCAAACTATGTCTCCTGGGTTTATGACGGATGGAAAACAAGCTGCAGAGGCTCCCATTGAGCGTCTGGTCAAAAGGATCCGATCGATGTCCCCAGTGACCTTCAACTCTG
CAGTGAGTGATTTGCATGCAGTATACAATTTGTACGATAGCATGGTGGGTTCTGCGCCAGGTAGAAGGTCCAATGCTGCTATTGGGGAGGACCTTGTTGCTATGACAAGGTGTCGTTTGCAGgcaagtaatttcatgtcactggatagcagtgctacaaggagagtgaggcattgtatgagttcattgcctctcactgtt
gcatcttcagGTAGAAGTTTGGATGACAGTCCTCATCAGATGACAGATCTGGAGTCTTCTGAAATGCTCTCGACAGCAACATCGACTGCTAAAAGGCCTAGGCTTGAGCTTGATCGTGTTTTGCAGCTTGAAATTCGGGATGTGAATAAACAATTGATTGAGACTGTGGTGGATTTAAGTGATAATGATATTGATTCTGC
TTCCTGTGGAGGGAGTGATGGAATTGTCGTCAAATGTTCCTATAATGCAATGGCATTTCGTACAAGATTGAACTCTGGATACAAACAGGCCCATAAGTCACTAATTTCACCATTATGGCTGCTGATTCCTTTGAGCTACCCGAAGTGTTCTCCTGTAGTTCTAAACAGATTTCCAGTTGAAACAGTTGAAACAATCAAGG
ATCACGAAGACCAAGACCTTTCATTGAAAACAAAAGCTCTGTTCGATGTATCTGTTTGTAATCTCCCAGAACCAATGACATTGGGAACTCTGGCAAGAACATGGGATGTTTGTGCTCGCAATGTAGTAGCTGAATATGCACATCAGATGGGAGGGGGTAACTTCAGTTCAAAATATGGTGCATGGGAATATTGTATAAGT
GCCTGAACTTGCCATCTTGAAAGTTGAAACTACTAGCTTCTGTGGTCTCCATATGTTAACTGATCAAGAATTGCTGGCTTACGATGCCTGAATATATTAGTAGTACTAGTAACATGCTGATTTTAGTTATTGGAACCTGATATCTACCATCTTCTCTTTTAGCCATTAAAATAATCATAAAGATCTGATGTGTATAGATT
GATACACCCCTTGGGGTGGAACGGACTACAGTTTGAACAGAACACTGTGGCCCTCTTGCTTATGCAATAAAAGTCACCGGAATTGTGCAAGAACTTGCACATAATGTTCTTTAACAGGTAGCTGGTATAGTCTCC