sp|Q40784|AAPC_CENCI ----> Putative glucose-6-phosphate 1-epimerase
Intron 1 GTCAGCTCAC ... TTGCAATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 43.85 | 365 | 19 | 285 |
| A2 | 41.25 | 386 | 31 | 271 |
| A3 | 42.42 | 475 | 18 | 350 |
| A4 | 43.91 | 341 | 16 | 267 |
| A5 | 43.35 | 264 | 15 | 202 |
| A6 | 43.33 | 1202 | 39 | 919 |
| A7 | 41.51 | 1636 | 68 | 1161 |
| A8 | 40.75 | 884 | 32 | 608 |
| A9 | 42.61 | 1790 | 60 | 1329 |
| A10 | 39.61 | 1642 | 84 | 1077 |
>TRINITY_DN127787_c1_g1_i5 from sample A1 / Example spliced isoformCGGGGAATAGGATTTTCTGTTATTCGGGTCCCACGAGCTACACTACTCCTTTTGTCTGTTTGTGCATGCCGATTTGTCTTCTCACGGAGGTCAGAGGTTCGAATGTCGTTATGGCTAAGGTGGCTGCAGCGCCTATATAAGCGGCCCCTGTGGTAGGAGTAACTTGCCAGAATTTTTTTTTTAATCTTATCTTCATCGAT
CGTCCAATCTTCGAAGGTGTGTTGTTGAGTAGGCTGAGGGCTTTGGATGGGCAATTTGACGATGTCGGACCAGAAGGTTTCTGTGGAGATGCAGAAGGACGCCAATGGGCTTGAAAAAGTTGTACTGAAGGAACCCCGTGGAGCCTCTGCTCAGGTGCACCTTTTTGGAGGTCATGTGACATCATGGAAGAATGATCGTG
GAGAAGAATTATTGTTTGTCAGTAGTAAGGCCATATTCAGACCACCCAAAGCTATAAGAGGAGGGATTCCAATTTGCTTTCCTCAGTTTGGCAGTGGTGGTTCACTGGAGCAACATGGTTTTGCGAGAAATAGGTTTTGGAGTATTGACAGCGACCCTCCACCCTTTCCCACAAATACATCAAACAACAAGGCTGTAGTT
GATCTAATTCTTAAGCCCTCTGATGAAGATAGTAAGATTTGGCCCCACAGTTTTGAGTTTCGGTTTCGTGTGGTTTTGGCCCCTGGTGGAGATCTTACTTTGATTTCCCGAATCAGAAATACTGACAGCAAGCCATTTACTTTCACATTTGCTTATCATACATACTTTTCTGTGTCTGATATCAGTGAAGTACGAGTAGA
AGGACTGGAAACCTTAGACTACCTGGACAACTTACAAAATAAAGAACGTTTTACTGAGCAAGGCGATGCAATCACCTTTGAGTCTGAGGTGGACAGAATCTATCTTAGCACCCCAACAAAAATTGCAATAATTGACCATGAGAAGAAGAGAACATTTGTATTGAAAAAGGATGGCCTTGCTGATGCAGTTGTGTGGAATC
CTTGGGAGAAGAAAGCTAAAGCCATGGCCGACTTTGGGGATGATGAATACAAGCATATGCTGTGTATTGAGGCTGCAGCAGTAGAAAAGCCTATTACGTTAAAGCCAGGTGAAGAATGGAAAGGTCGTCAGGAGCTGTCTGCTGTGCCATCAAGTTACTTTAGTGGTCAGTTGGATCCCCAGAAAGTTTTACAAGGTTAA
GCAGCAATCTGGGCAAGTTACCAACTACTTCAGGTTATTGCATGTCGTATTCAAATTTCGTAGTTTTATATCGAGGACAAATAACTGGAAATTCACCATCTTACTGTACTAAATGATGGTATTTAAGTTTCATTTCCTGTTTTATATGTATAAATTTCTGACGAAGAGTTAGTTGGACTGGTCAATGAGTTCGAAAGATT
CTATTATGAAAACTTGTAATTGAATGCCACCCTCTTTACTTGTAATATAGTCAAGGAACATGAATATGGAAAACTGTGAACTTCTTAATGTCTGCTTTTATATTTTTTACATAAGAACTAATATAACAACATTAAAATTTACTAACATGTCTCCATATACTATTTAGAACCACATCATTGTTGGAGTAAGGACGAGTAAC
TAGACTTGTTTGCTGTAAGATTGGG
>TRINITY_DN127787_c1_g1_i1 from sample A1 / Example unspliced isoform:CGGGGAATAGGATTTTCTGTTATTCGGGTCCCACGAGCTACACTACTCCTTTTGTCTGTTTGTGCATGCCGATTTGTCTTCTCACGGAGGTCAGAGGTTCGAATGTCGTTATGGCTAAGGTGGCTGCAGCGCCTATATAAGCGGCCCCTGTGGTAGGAGTAACTTGCCAGAATTTTTTTTTTAATCTTATCTTCATCGAT
CGTCCAATCTTCGAAGGTGTGTTGTTGAGTAGgtcagctcacaggcgaaaattttgtgaattagtgttgaaatttttgaatcttgatatatactcattgtgtatatatccttcatatactcattgtgtgtatatccggctacatctgttttatgtaattttcgtgtattaatttgcaatcagGCTGAGGGCTTTGGATGG
GCAATTTGACGATGTCGGACCAGAAGGTTTCTGTGGAGATGCAGAAGGACGCCAATGGGCTTGAAAAAGTTGTACTGAAGGAACCCCGTGGAGCCTCTGCTCAGGTGCACCTTTTTGGAGGTCATGTGACATCATGGAAGAATGATCGTGGAGAAGAATTATTGTTTGTCAGTAGTAAGGCCATATTCAGACCACCCAAA
GCTATAAGAGGAGGGATTCCAATTTGCTTTCCTCAGTTTGGCAGTGGTGGTTCACTGGAGCAACATGGTTTTGCGAGAAATAGGTTTTGGAGTATTGACAGCGACCCTCCACCCTTTCCCACAAATACATCAAACAACAAGGCTGTAGTTGATCTAATTCTTAAGCCCTCTGATGAAGATAGTAAGATTTGGCCCCACAG
TTTTGAGTTTCGGTTTCGTGTGGTTTTGGCCCCTGGTGGAGATCTTACTTTGATTTCCCGAATCAGAAATACTGACAGCAAGCCATTTACTTTCACATTTGCTTATCATACATACTTTTCTGTGTCTGATATCAGTGAAGTACGAGTAGAAGGACTGGAAACCTTAGACTACCTGGACAACTTACAAAATAAAGAACGTT
TTACTGAGCAAGGCGATGCAATCACCTTTGAGTCTGAGGTGGACAGAATCTATCTTAGCACCCCAACAAAAATTGCAATAATTGACCATGAGAAGAAGAGAACATTTGTATTGAAAAAGGATGGCCTTGCTGATGCAGTTGTGTGGAATCCTTGGGAGAAGAAAGCTAAAGCCATGGCCGACTTTGGGGATGATGAATAC
AAGCATATGCTGTGTATTGAGGCTGCAGCAGTAGAAAAGCCTATTACGTTAAAGCCAGGTGAAGAATGGAAAGGTCGTCAGGAGCTGTCTGCTGTGCCATCAAGTTACTTTAGTGGTCAGTTGGATCCCCAGAAAGTTTTACAAGGTTAAGCAGCAATCTGGGCAAGTTACCAACTACTTCAGGTTATTGCATGTCGTAT
TCAAATTTCGTAGTTTTATATCGAGGACAAATAACTGGAAATTCACCATCTTACTGTACTAAATGATGGTATTTAAGTTTCATTTCCTGTTTTATATGTATAAATTTCTGACGAAGAGTTAGTTGGACTGGTCAATGAGTTCGAAAGATTCTATTATGAAAACTTGTAATTGAATGCCACCCTCTTTACTTGTAATATAG
TCAAGGAACATGAATATGGAAAACTGTGAACTTCTTAATGTCTGCTTTTATATTTTTTACATAAGAACTAATATAACAACATTAAAATTTACTAACATGTCTCCATATACTATTTAGAACCACATCATTGTTGGAGTAAGGACGAGTAACTAGACTTGTTTGCTGTAAGATTGGG
Intron 2 GTGTGTTGTT ... TTGCAATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 43.45 | 371 | 24 | 285 |
| A2 | 41 | 390 | 39 | 271 |
| A3 | 42.02 | 483 | 17 | 350 |
| A4 | 43.34 | 349 | 16 | 267 |
| A5 | 42.53 | 273 | 22 | 202 |
| A6 | 42.68 | 1234 | 60 | 919 |
| A7 | 41.04 | 1668 | 95 | 1161 |
| A8 | 40.43 | 896 | 58 | 608 |
| A9 | 42 | 1835 | 101 | 1329 |
| A10 | 39.15 | 1674 | 129 | 1077 |
>TRINITY_DN127787_c1_g1_i4 from sample A1 / Example spliced isoformCGGGGAATAGGATTTTCTGTTATTCGGGTCCCACGAGCTACACTACTCCTTTTGTCTGTTTGTGCATGCCGATTTGTCTTCTCACGGAGGTCAGAGGTTCGAATGTCGTTATGGCTAAGGTGGCTGCAGCGCCTATATAAGCGGCCCCTGTGGTAGGAGTAACTTGCCAGAATTTTTTTTTTAATCTTATCTTCATCGAT
CGTCCAATCTTCGAAGGCTGAGGGCTTTGGATGGGCAATTTGACGATGTCGGACCAGAAGGTTTCTGTGGAGATGCAGAAGGACGCCAATGGGCTTGAAAAAGTTGTACTGAAGGAACCCCGTGGAGCCTCTGCTCAGGTGCACCTTTTTGGAGGTCATGTGACATCATGGAAGAATGATCGTGGAGAAGAATTATTGTT
TGTCAGTAGTAAGGCCATATTCAGACCACCCAAAGCTATAAGAGGAGGGATTCCAATTTGCTTTCCTCAGTTTGGCAGTGGTGGTTCACTGGAGCAACATGGTTTTGCGAGAAATAGGTTTTGGAGTATTGACAGCGACCCTCCACCCTTTCCCACAAATACATCAAACAACAAGGCTGTAGTTGATCTAATTCTTAAGC
CCTCTGATGAAGATAGTAAGATTTGGCCCCACAGTTTTGAGTTTCGGTTTCGTGTGGTTTTGGCCCCTGGTGGAGATCTTACTTTGATTTCCCGAATCAGAAATACTGACAGCAAGCCATTTACTTTCACATTTGCTTATCATACATACTTTTCTGTGTCTGATATCAGTGAAGTACGAGTAGAAGGACTGGAAACCTTA
GACTACCTGGACAACTTACAAAATAAAGAACGTTTTACTGAGCAAGGCGATGCAATCACCTTTGAGTCTGAGGTGGACAGAATCTATCTTAGCACCCCAACAAAAATTGCAATAATTGACCATGAGAAGAAGAGAACATTTGTATTGAAAAAGGATGGCCTTGCTGATGCAGTTGTGTGGAATCCTTGGGAGAAGAAAGC
TAAAGCCATGGCCGACTTTGGGGATGATGAATACAAGCATATGCTGTGTATTGAGGCTGCAGCAGTAGAAAAGCCTATTACGTTAAAGCCAGGTGAAGAATGGAAAGGTCGTCAGGAGCTGTCTGCTGTGCCATCAAGTTACTTTAGTGGTCAGTTGGATCCCCAGAAAGTTTTACAAGGTTAAGCAGCAATCTGGGCAA
GTTACCAACTACTTCAGGTTATTGCATGTCGTATTCAAATTTCGTAGTTTTATATCGAGGACAAATAACTGGAAATTCACCATCTTACTGTACTAAATGATGGTATTTAAGTTTCATTTCCTGTTTTATATGTATAAATTTCTGACGAAGAGTTAGTTGGACTGGTCAATGAGTTCGAAAGATTCTATTATGAAAACTTG
TAATTGAATGCCACCCTCTTTACTTGTAATATAGTCAAGGAACATGAATATGGAAAACTGTGAACTTCTTAATGTCTGCTTTTATATTTTTTACATAAGAACTAATATAACAACATTAAAATTTACTAACATGTCTCCATATACTATTTAGAACCACATCATTGTTGGAGTAAGGACGAGTAACTAGACTTGTTTGCTGT
AAGATTGGG
>TRINITY_DN127787_c1_g1_i1 from sample A1 / Example unspliced isoform:CGGGGAATAGGATTTTCTGTTATTCGGGTCCCACGAGCTACACTACTCCTTTTGTCTGTTTGTGCATGCCGATTTGTCTTCTCACGGAGGTCAGAGGTTCGAATGTCGTTATGGCTAAGGTGGCTGCAGCGCCTATATAAGCGGCCCCTGTGGTAGGAGTAACTTGCCAGAATTTTTTTTTTAATCTTATCTTCATCGAT
CGTCCAATCTTCGAAGgtgtgttgttgagtaggtcagctcacaggcgaaaattttgtgaattagtgttgaaatttttgaatcttgatatatactcattgtgtatatatccttcatatactcattgtgtgtatatccggctacatctgttttatgtaattttcgtgtattaatttgcaatcagGCTGAGGGCTTTGGATGG
GCAATTTGACGATGTCGGACCAGAAGGTTTCTGTGGAGATGCAGAAGGACGCCAATGGGCTTGAAAAAGTTGTACTGAAGGAACCCCGTGGAGCCTCTGCTCAGGTGCACCTTTTTGGAGGTCATGTGACATCATGGAAGAATGATCGTGGAGAAGAATTATTGTTTGTCAGTAGTAAGGCCATATTCAGACCACCCAAA
GCTATAAGAGGAGGGATTCCAATTTGCTTTCCTCAGTTTGGCAGTGGTGGTTCACTGGAGCAACATGGTTTTGCGAGAAATAGGTTTTGGAGTATTGACAGCGACCCTCCACCCTTTCCCACAAATACATCAAACAACAAGGCTGTAGTTGATCTAATTCTTAAGCCCTCTGATGAAGATAGTAAGATTTGGCCCCACAG
TTTTGAGTTTCGGTTTCGTGTGGTTTTGGCCCCTGGTGGAGATCTTACTTTGATTTCCCGAATCAGAAATACTGACAGCAAGCCATTTACTTTCACATTTGCTTATCATACATACTTTTCTGTGTCTGATATCAGTGAAGTACGAGTAGAAGGACTGGAAACCTTAGACTACCTGGACAACTTACAAAATAAAGAACGTT
TTACTGAGCAAGGCGATGCAATCACCTTTGAGTCTGAGGTGGACAGAATCTATCTTAGCACCCCAACAAAAATTGCAATAATTGACCATGAGAAGAAGAGAACATTTGTATTGAAAAAGGATGGCCTTGCTGATGCAGTTGTGTGGAATCCTTGGGAGAAGAAAGCTAAAGCCATGGCCGACTTTGGGGATGATGAATAC
AAGCATATGCTGTGTATTGAGGCTGCAGCAGTAGAAAAGCCTATTACGTTAAAGCCAGGTGAAGAATGGAAAGGTCGTCAGGAGCTGTCTGCTGTGCCATCAAGTTACTTTAGTGGTCAGTTGGATCCCCAGAAAGTTTTACAAGGTTAAGCAGCAATCTGGGCAAGTTACCAACTACTTCAGGTTATTGCATGTCGTAT
TCAAATTTCGTAGTTTTATATCGAGGACAAATAACTGGAAATTCACCATCTTACTGTACTAAATGATGGTATTTAAGTTTCATTTCCTGTTTTATATGTATAAATTTCTGACGAAGAGTTAGTTGGACTGGTCAATGAGTTCGAAAGATTCTATTATGAAAACTTGTAATTGAATGCCACCCTCTTTACTTGTAATATAG
TCAAGGAACATGAATATGGAAAACTGTGAACTTCTTAATGTCTGCTTTTATATTTTTTACATAAGAACTAATATAACAACATTAAAATTTACTAACATGTCTCCATATACTATTTAGAACCACATCATTGTTGGAGTAAGGACGAGTAACTAGACTTGTTTGCTGTAAGATTGGG
Intron 3 GTAAGATCTA ... TTTCGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.18 | 787 | 146 | 329 |
| A2 | 23.21 | 685 | 115 | 299 |
| A3 | 21.32 | 764 | 120 | 294 |
| A4 | 23.55 | 620 | 102 | 280 |
| A5 | 20.27 | 358 | 50 | 132 |
| A6 | 22.82 | 4982 | 809 | 2137 |
| A7 | 23.34 | 4724 | 787 | 2090 |
| A8 | 22.77 | 5509.3 | 913 | 2336 |
| A9 | 22.23 | 5271 | 761 | 2253 |
| A10 | 21.58 | 3428 | 460 | 1427 |
>TRINITY_DN39898_c0_g1_i6 from sample A9 / Example spliced isoformGCGGGGAATAGGATTTTCTGTTATTCGGGTCCCACGAGCTACACTACTCCTTTTGTCTGTTTGTGCATGCCGATTTGTCTTCTCACGGAGGTCAGAGGTTCGAATGTCGTTATGGCTAAGGTGGCTGCAGCGCCTATATAAGCGGCCCCTGTGGTAGGAGTAACTTGCCAGAATTTTTTTTTTAATCTTATCTTCATCGA
TCGTCCAATCTTCGAAGGTGTGTTGTTGAGTAGGCTGAGGGCTTTGGATGGGCAATTTGACGATGTCGGACCAGAAGGTTTCTGTGGAGATGCAGAAGGACGCCAATGGGCTTGAAAAAGTTGTACTGAAGGAACCCCGTGGAGCCTCTGCTCAGGTGCACCTTTTTGGAGGTCATGTGACATCATGGAAGAATGATCGT
GGAGAAGAATTATTGTTTGTCAGTAGTAAGGCCATATTCAGACCACCCAAAGCTATAAGAGGAGGGATTCCAATTTGCTTTCCTCAGTTTGGCAGTGGTGGTTCACTGGAGCAACATGGTTTTGCGAGAAATAGGTTTTGGAGTATTGACAGCGACCCTCCACCCTTTCCCACAAATACATCAAACAACAAGGCTGTAGT
TGATCTAATTCTTAAGCCCTCTGATGAAGATAGTAAGATTTGGCCCCACAGTTTTGAGTTTCGGTTTCGTGTGGTTTTGGCCCCTGGTGGAGATCTTACTTTGATTTCCCGAATCAGAAATACTGACAGCAAGCCATTTACTTTCACATTTGCTTATCATACATACTTTTCTGTGTCTGATATCAGTGAAGTACGAGTAG
AAGGACTGGAAACCTTAGACTACCTGGACAACTTACAAAATAAAGAACGTTTTACTGAGCAAGGCGATGCAATCACCTTTGAGTCTGAGGTGGACAGAATCTATCTTAGCACCCCAACAAAAATTGCAATAATTGACCATGAGAAGAAGAGAACATTTGTATTGAAAAAGGATGGCCTTGCTGATGCAGTTGTGTGGAAT
CCTTGGGAGAAGAAAGCTAAAGCCATGGCCGACTTTGGGGATGATGAATACAAGCATATGCTGTGTATTGAGGCTGCAGCAGTAGAAAAGCCTATTACGTTAAAGCCAGGTGAAGAATGGAAAGGTCGTCAGGAGCTGTCTGCTGTGCCATCAAGTTACTTTAGTGGTCAGTTGGATCCCCAGAAAGTTTTACAAGGTTA
AGCAGCAATCTGGGCAAGTTACCAACTACTTCAGGTTATTGCATGTCGTATTCAAATTTCGTAGTTTTATATCGAGGACAAATAACTGGAAATTCACCATCTTACTGTACTAAATGATGGTATTTGTTTAAGTTTCATTTCCTGTTTTATATGTATAAATTTCTGACGAAGAGTTAGTTGGACTGGTCAATGAGTTCGAA
AGATTCTATTATGAAAACTTGTAATTGAATGCCACCCTCTTTACTTGTAATATAGTCAAGGAACATGAATATGGAAAACTGTGAACTTCTTAATGTCTGCTTTTATATTTTTTACATAAGAACTAATATAACAACATTAAATTTACTAACCTGTCTCCATATACTATTTAGAACCACATCATTGTTGGAGTAAGGACGAG
TAACTAGACTTGTTTGCTGTAAGATTGGACACGATATAACTCTGTGTTGCATCCGTTGTAGACCTACATGGAAACAAATCATATATGAAATAAATTTAATTTGCAT
>TRINITY_DN39898_c0_g1_i5 from sample A9 / Example unspliced isoform:CAGGTGCACCTTTTTGGAGGTCATGTGACATCATGGAAGAATGATCGTGGAGAAGAATTATTGTTTGTCAGTAGTAAGGCCATATTCAGACCACCCAAAGCTATAAGAGGAGGGATTCCAATTTGCTTTCCTCAGTTTGGCAGTGGTGGTTCACTGGAGCAACATGGTTTTGCGAGAAATAGGTTTTGGAGTATTGACAG
CGACCCTCCACCCTTTCCCACAAATACATCAAACAACAAGGCTGTAGTTGATCTAATTCTTAAGCCCTCTGATGAAGATAGTAAGATTTGGCCCCACAGTTTTGAGTTTCGGTTTCGTGTGGTTTTGGCCCCTGGTGGAGATCTTACTTTGATTTCCCGAATCAGAAATACTGACAGCAAGCCATTTACTTTCACATTTG
CTTATCATACATACTTTTCTGTGTCTGATATCAGTGAAGTACGAGTAGAAGGACTGGAAACCTTAGACTACCTGGACAACTTACAAAATAAAGAACGTTTTACTGAGCAAGGCGATGCAATCACCTTTGAGTCTGAGGTGGACAGAATCTATCTTAGCACCCCAACAAAAATTGCAATAATTGACCATGAGAAGAAGAGA
ACATTTGTATTGAAAAAGGATGGCCTTGCTGATGCAGgtaagatctattttcttcaagtatatggggatttgtacagtccaacagtatgaccaatattgacatgtaatcagtgacaaatcaaggatttgtgctttgttaatatgattaatagttgcatcataaattgttaagtactatatcaatgcttgattggatatgg
actattttcgtgcagTTGTGTGGAATCCTTGGGAGAAGAAAGCTAAAGCCATGGCCGACTTTGGGGATGATGAATACAAGCATATGCTGTGTATTGAGGCTGCAGCAGTAGAAAAGCCTATTACGTTAAAGCCAGGTGAAGAATGGAAAGGTCGTCAGGAGCTGTCTGCTGTGCCATCAAGTTACTTTAGTGGTCAGTTG
GATCCCCAGAAAGTTTTACAAGGTTAAGCAGCAATCTGGGCAAGTTACCAACTACTTCAGGTTATTGCATGTCGTATTCAAATTTCGTAGTTTTATATCGAGGACAAATAACTGGAAATTCACCATCTTACTGTACTAAATGATGGTATTTGTTTAAGTTTCATTTCCTGTTTTATATGTATAAATTTCTGACGAAGAGT
TAGTTGGACTGGTCAATGAGTTCGAAAGATTCTATTATGAAAACTTGTAATTGAATGCCACCCTCTTTACTTGTAATATAGTCAAGGAACATGAATATGGAAAACTGTGAACTTCTTAATGTCTGCTTTTATATTTTTTACATAAGAACTAATATAACAACATTAAATTTACTAACCTGTCTCCATATACTATTTAGAAC
CACATCATTGTTGGAGTAAGGACGAGTAACTAGACTTGTTTGCTGTAAGATTGGACACGATATAACTCTGTGTTGCATCCGTTGTAGACCTACATGGAAACAAATCATATATGAAATAAATTTAATTTGCAT
Intron 4 GTATGCCATT ... CTTTCTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 2.19 | 1340 | 30 | 6 |
| A2 | 1.34 | 1177 | 16 | 5 |
| A3 | 1.47 | 1677 | 25 | 9 |
| A4 | 1.03 | 1061 | 11 | 2 |
| A5 | 1.65 | 836 | 14 | 4 |
| A6 | 0.04 | 5341.7 | 2 | 0 |
| A7 | 0.03 | 6798.7 | 2 | 2 |
| A8 | 0 | 3712 | 0 | 0 |
| A9 | 0.08 | 6549 | 5 | 1 |
| A10 | 0 | 6056.3 | 0 | 0 |
>TRINITY_DN127787_c1_g1_i5 from sample A1 / Example spliced isoformCGGGGAATAGGATTTTCTGTTATTCGGGTCCCACGAGCTACACTACTCCTTTTGTCTGTTTGTGCATGCCGATTTGTCTTCTCACGGAGGTCAGAGGTTCGAATGTCGTTATGGCTAAGGTGGCTGCAGCGCCTATATAAGCGGCCCCTGTGGTAGGAGTAACTTGCCAGAATTTTTTTTTTAATCTTATCTTCATCGAT
CGTCCAATCTTCGAAGGTGTGTTGTTGAGTAGGCTGAGGGCTTTGGATGGGCAATTTGACGATGTCGGACCAGAAGGTTTCTGTGGAGATGCAGAAGGACGCCAATGGGCTTGAAAAAGTTGTACTGAAGGAACCCCGTGGAGCCTCTGCTCAGGTGCACCTTTTTGGAGGTCATGTGACATCATGGAAGAATGATCGTG
GAGAAGAATTATTGTTTGTCAGTAGTAAGGCCATATTCAGACCACCCAAAGCTATAAGAGGAGGGATTCCAATTTGCTTTCCTCAGTTTGGCAGTGGTGGTTCACTGGAGCAACATGGTTTTGCGAGAAATAGGTTTTGGAGTATTGACAGCGACCCTCCACCCTTTCCCACAAATACATCAAACAACAAGGCTGTAGTT
GATCTAATTCTTAAGCCCTCTGATGAAGATAGTAAGATTTGGCCCCACAGTTTTGAGTTTCGGTTTCGTGTGGTTTTGGCCCCTGGTGGAGATCTTACTTTGATTTCCCGAATCAGAAATACTGACAGCAAGCCATTTACTTTCACATTTGCTTATCATACATACTTTTCTGTGTCTGATATCAGTGAAGTACGAGTAGA
AGGACTGGAAACCTTAGACTACCTGGACAACTTACAAAATAAAGAACGTTTTACTGAGCAAGGCGATGCAATCACCTTTGAGTCTGAGGTGGACAGAATCTATCTTAGCACCCCAACAAAAATTGCAATAATTGACCATGAGAAGAAGAGAACATTTGTATTGAAAAAGGATGGCCTTGCTGATGCAGTTGTGTGGAATC
CTTGGGAGAAGAAAGCTAAAGCCATGGCCGACTTTGGGGATGATGAATACAAGCATATGCTGTGTATTGAGGCTGCAGCAGTAGAAAAGCCTATTACGTTAAAGCCAGGTGAAGAATGGAAAGGTCGTCAGGAGCTGTCTGCTGTGCCATCAAGTTACTTTAGTGGTCAGTTGGATCCCCAGAAAGTTTTACAAGGTTAA
GCAGCAATCTGGGCAAGTTACCAACTACTTCAGGTTATTGCATGTCGTATTCAAATTTCGTAGTTTTATATCGAGGACAAATAACTGGAAATTCACCATCTTACTGTACTAAATGATGGTATTTAAGTTTCATTTCCTGTTTTATATGTATAAATTTCTGACGAAGAGTTAGTTGGACTGGTCAATGAGTTCGAAAGATT
CTATTATGAAAACTTGTAATTGAATGCCACCCTCTTTACTTGTAATATAGTCAAGGAACATGAATATGGAAAACTGTGAACTTCTTAATGTCTGCTTTTATATTTTTTACATAAGAACTAATATAACAACATTAAAATTTACTAACATGTCTCCATATACTATTTAGAACCACATCATTGTTGGAGTAAGGACGAGTAAC
TAGACTTGTTTGCTGTAAGATTGGG
>TRINITY_DN127787_c1_g1_i6 from sample A1 / Example unspliced isoform:GGGGTGAGAAGTTCTCTATAGGTCCTTGTTTAATATGATTTGCAAGCTCGCAGGTGCACCTTTTTGGAGGTCATGTGACATCATGGAAGAATGATCGTGGAGAAGAATTATTGTTTGTCAGTAGTAAGgtatgccatttttatatggaataagtactgtattgttctttagggtgttttatgggatatctcgttggagaa
agtagcaaagaatcagttatcagaatcagtcaataacttgggacataagagtacaatgcacttgtatttggttacactctgaattctaaactttttttctgtactctgcttataatgagtttgaagcttatgtaaaaatattgctttttcttgcattgtgtggtgagaagctttgcatgttcttctcgataggtatattt
agacttcaggattcatatgttcaaagtcttctatgcaaatagagttttagcgactgagtaagccttaccatcatatcctttttctccctttcattgataagattttgcactggtctttggatagggtccaaatccatattgactgagtggtcttaacatgccattttggttgagcacgtgaaactgtacttgcaagtttg
ccacttgagtttatagttttccccttaattgcgattgtctacctcaattcctttctctttctggaactgtttaaagtgttattctaagaaactccttttattattacatagatgtttccaattataaagtgcttaccattttacatattcactgcactaaagcatcaccttggtaagaaagctgaatctgagcattcatg
ttgccaattatatgtgctttctgcagGCCATATTCAGACCACCCAAAGCTATAAGAGGAGGGATTCCAATTTGCTTTCCTCAGGTACACCAGGGAAAATTCTTTTCTACTCCCATTAAGAGTCTTTTAATCCAGTGAAAAAATTTATTGTTAGGTGATACGTCCTGTATGTAACAGTTTGGCAGTGGTGGTTCACTGGAG
CAACATGGTTTTGCGAGAAATAGGTTTTGGAGTATTGACAGCGACCCTCCACCCTTTCCCACAAATACATCAAACAACAAGGCTGTAGTTGATCTAATTCTTAAGCCCTCTGATGAAGATAGTAAGATTTGGCCCCACAGTTTTGAGTTTCGGTTTCGTGTGGTTTTGGCCCCTGGTGGAGATCTTACTTTGATTTCCCG
AATCAGAAATACTGACAGCAAGCCATTTACTTTCACATTTGCTTATCATACATACTTTTCTGTGTCTGATATCAGTGAAGTACGAGTAGAAGGACTGGAAACCTTAGACTACCTGGACAACTTACAAAATAAAGAACGTTTTACTGAGCAAGGCGATGCAATCACCTTTGAGTCTGAGGTGGACAGAATCTATCTTAGCA
CCCCAACAAAAATTGCAATAATTGACCATGAGAAGAAGAGAACATTTGTATTGAAAAAGGATGGCCTTGCTGATGCAGTTGTGTGGAATCCTTGGGAGAAGAAAGCTAAAGCCATGGCCGACTTTGGGGATGATGAATACAAGCATATGCTGTGTATTGAGGCTGCAGCAGTAGAAAAGCCTATTACGTTAAAGCCAGGT
GAAGAATGGAAAGGTCGTCAGGAGCTGTCTGCTGTGCCATCAAGTTACTTTAGTGGTCAGTTGGATCCCCAGAAAGTTTTACAAGGTTAAGCAGCAATCTGGGCAAGTTACCAACTACTTCAGGTTATTGCATGTCGTATTCAAATTTCGTAGTTTTATATCGAGGACAAATAACTGGAAATTCACCATCTTACTGTACT
AAATGATGGTATTTAAGTTTCATTTCCTGTTTTATATGTATAAATTTCTGACGAAGAGTTAGTTGGACTGGTCAATGAGTTCGAAAGATTCTATTATGAAAACTTGTAATTGAATGCCACCCTCTTTACTTGTAATATAGTCAAGGAACATGAATATGGAAAACTGTGAACTTCTTAATGTCTGCTTTTATATTTTTTAC
ATAAGAACTAATATAACAACATTAAAATTTACTAACATGTCTCCATATACTATTTAGAACCACATCATTGTTGGAGTAAGGACGAGTAACTAGACTTGTTTGCTGTAAGATTGGG
Intron 5 GTACACCAGG ... TATGTAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.74 | 1080 | 6 | 172 |
| A2 | 17.03 | 1072 | 4 | 220 |
| A3 | 16.04 | 1481 | 9 | 283 |
| A4 | 13.17 | 930 | 2 | 141 |
| A5 | 13.5 | 705 | 3 | 110 |
| A6 | 16.43 | 5350 | 0 | 1052 |
| A7 | 15.6 | 6579 | 2 | 1216 |
| A8 | 16.31 | 3781 | 0 | 737 |
| A9 | 16.25 | 6373 | 4 | 1237 |
| A10 | 15.35 | 5669 | 0 | 1028 |
>TRINITY_DN127787_c1_g1_i5 from sample A1 / Example spliced isoformCGGGGAATAGGATTTTCTGTTATTCGGGTCCCACGAGCTACACTACTCCTTTTGTCTGTTTGTGCATGCCGATTTGTCTTCTCACGGAGGTCAGAGGTTCGAATGTCGTTATGGCTAAGGTGGCTGCAGCGCCTATATAAGCGGCCCCTGTGGTAGGAGTAACTTGCCAGAATTTTTTTTTTAATCTTATCTTCATCGAT
CGTCCAATCTTCGAAGGTGTGTTGTTGAGTAGGCTGAGGGCTTTGGATGGGCAATTTGACGATGTCGGACCAGAAGGTTTCTGTGGAGATGCAGAAGGACGCCAATGGGCTTGAAAAAGTTGTACTGAAGGAACCCCGTGGAGCCTCTGCTCAGGTGCACCTTTTTGGAGGTCATGTGACATCATGGAAGAATGATCGTG
GAGAAGAATTATTGTTTGTCAGTAGTAAGGCCATATTCAGACCACCCAAAGCTATAAGAGGAGGGATTCCAATTTGCTTTCCTCAGTTTGGCAGTGGTGGTTCACTGGAGCAACATGGTTTTGCGAGAAATAGGTTTTGGAGTATTGACAGCGACCCTCCACCCTTTCCCACAAATACATCAAACAACAAGGCTGTAGTT
GATCTAATTCTTAAGCCCTCTGATGAAGATAGTAAGATTTGGCCCCACAGTTTTGAGTTTCGGTTTCGTGTGGTTTTGGCCCCTGGTGGAGATCTTACTTTGATTTCCCGAATCAGAAATACTGACAGCAAGCCATTTACTTTCACATTTGCTTATCATACATACTTTTCTGTGTCTGATATCAGTGAAGTACGAGTAGA
AGGACTGGAAACCTTAGACTACCTGGACAACTTACAAAATAAAGAACGTTTTACTGAGCAAGGCGATGCAATCACCTTTGAGTCTGAGGTGGACAGAATCTATCTTAGCACCCCAACAAAAATTGCAATAATTGACCATGAGAAGAAGAGAACATTTGTATTGAAAAAGGATGGCCTTGCTGATGCAGTTGTGTGGAATC
CTTGGGAGAAGAAAGCTAAAGCCATGGCCGACTTTGGGGATGATGAATACAAGCATATGCTGTGTATTGAGGCTGCAGCAGTAGAAAAGCCTATTACGTTAAAGCCAGGTGAAGAATGGAAAGGTCGTCAGGAGCTGTCTGCTGTGCCATCAAGTTACTTTAGTGGTCAGTTGGATCCCCAGAAAGTTTTACAAGGTTAA
GCAGCAATCTGGGCAAGTTACCAACTACTTCAGGTTATTGCATGTCGTATTCAAATTTCGTAGTTTTATATCGAGGACAAATAACTGGAAATTCACCATCTTACTGTACTAAATGATGGTATTTAAGTTTCATTTCCTGTTTTATATGTATAAATTTCTGACGAAGAGTTAGTTGGACTGGTCAATGAGTTCGAAAGATT
CTATTATGAAAACTTGTAATTGAATGCCACCCTCTTTACTTGTAATATAGTCAAGGAACATGAATATGGAAAACTGTGAACTTCTTAATGTCTGCTTTTATATTTTTTACATAAGAACTAATATAACAACATTAAAATTTACTAACATGTCTCCATATACTATTTAGAACCACATCATTGTTGGAGTAAGGACGAGTAAC
TAGACTTGTTTGCTGTAAGATTGGG
>TRINITY_DN127787_c1_g1_i6 from sample A1 / Example unspliced isoform:GGGGTGAGAAGTTCTCTATAGGTCCTTGTTTAATATGATTTGCAAGCTCGCAGGTGCACCTTTTTGGAGGTCATGTGACATCATGGAAGAATGATCGTGGAGAAGAATTATTGTTTGTCAGTAGTAAGGTATGCCATTTTTATATGGAATAAGTACTGTATTGTTCTTTAGGGTGTTTTATGGGATATCTCGTTGGAGAA
AGTAGCAAAGAATCAGTTATCAGAATCAGTCAATAACTTGGGACATAAGAGTACAATGCACTTGTATTTGGTTACACTCTGAATTCTAAACTTTTTTTCTGTACTCTGCTTATAATGAGTTTGAAGCTTATGTAAAAATATTGCTTTTTCTTGCATTGTGTGGTGAGAAGCTTTGCATGTTCTTCTCGATAGGTATATTT
AGACTTCAGGATTCATATGTTCAAAGTCTTCTATGCAAATAGAGTTTTAGCGACTGAGTAAGCCTTACCATCATATCCTTTTTCTCCCTTTCATTGATAAGATTTTGCACTGGTCTTTGGATAGGGTCCAAATCCATATTGACTGAGTGGTCTTAACATGCCATTTTGGTTGAGCACGTGAAACTGTACTTGCAAGTTTG
CCACTTGAGTTTATAGTTTTCCCCTTAATTGCGATTGTCTACCTCAATTCCTTTCTCTTTCTGGAACTGTTTAAAGTGTTATTCTAAGAAACTCCTTTTATTATTACATAGATGTTTCCAATTATAAAGTGCTTACCATTTTACATATTCACTGCACTAAAGCATCACCTTGGTAAGAAAGCTGAATCTGAGCATTCATG
TTGCCAATTATATGTGCTTTCTGCAGGCCATATTCAGACCACCCAAAGCTATAAGAGGAGGGATTCCAATTTGCTTTCCTCAGgtacaccagggaaaattcttttctactcccattaagagtcttttaatccagtgaaaaaatttattgttaggtgatacgtcctgtatgtaacagTTTGGCAGTGGTGGTTCACTGGAG
CAACATGGTTTTGCGAGAAATAGGTTTTGGAGTATTGACAGCGACCCTCCACCCTTTCCCACAAATACATCAAACAACAAGGCTGTAGTTGATCTAATTCTTAAGCCCTCTGATGAAGATAGTAAGATTTGGCCCCACAGTTTTGAGTTTCGGTTTCGTGTGGTTTTGGCCCCTGGTGGAGATCTTACTTTGATTTCCCG
AATCAGAAATACTGACAGCAAGCCATTTACTTTCACATTTGCTTATCATACATACTTTTCTGTGTCTGATATCAGTGAAGTACGAGTAGAAGGACTGGAAACCTTAGACTACCTGGACAACTTACAAAATAAAGAACGTTTTACTGAGCAAGGCGATGCAATCACCTTTGAGTCTGAGGTGGACAGAATCTATCTTAGCA
CCCCAACAAAAATTGCAATAATTGACCATGAGAAGAAGAGAACATTTGTATTGAAAAAGGATGGCCTTGCTGATGCAGTTGTGTGGAATCCTTGGGAGAAGAAAGCTAAAGCCATGGCCGACTTTGGGGATGATGAATACAAGCATATGCTGTGTATTGAGGCTGCAGCAGTAGAAAAGCCTATTACGTTAAAGCCAGGT
GAAGAATGGAAAGGTCGTCAGGAGCTGTCTGCTGTGCCATCAAGTTACTTTAGTGGTCAGTTGGATCCCCAGAAAGTTTTACAAGGTTAAGCAGCAATCTGGGCAAGTTACCAACTACTTCAGGTTATTGCATGTCGTATTCAAATTTCGTAGTTTTATATCGAGGACAAATAACTGGAAATTCACCATCTTACTGTACT
AAATGATGGTATTTAAGTTTCATTTCCTGTTTTATATGTATAAATTTCTGACGAAGAGTTAGTTGGACTGGTCAATGAGTTCGAAAGATTCTATTATGAAAACTTGTAATTGAATGCCACCCTCTTTACTTGTAATATAGTCAAGGAACATGAATATGGAAAACTGTGAACTTCTTAATGTCTGCTTTTATATTTTTTAC
ATAAGAACTAATATAACAACATTAAAATTTACTAACATGTCTCCATATACTATTTAGAACCACATCATTGTTGGAGTAAGGACGAGTAACTAGACTTGTTTGCTGTAAGATTGGG