sp|Q9FME4|PP438_ARATH ----> Small ribosomal subunit protein mL104 (rPPR9)
Intron 1 GCCTTTCAAG ... TCATTACTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 59.75 | 65 | 99 | 94 |
| A2 | 69.02 | 56 | 132 | 117.5 |
| A3 | 64.83 | 59 | 117 | 100.5 |
| A4 | 60.95 | 35.8 | 62.8 | 49 |
| A5 | 58.54 | 17 | 29 | 19 |
| A6 | 67.49 | 92 | 190.5 | 191.5 |
| A7 | 63.89 | 273 | 541 | 425 |
| A8 | 64.73 | 381 | 745.5 | 653.5 |
| A9 | 65.78 | 286 | 612.5 | 487 |
| A10 | 68.36 | 170 | 409.5 | 325 |
>TRINITY_DN116150_c0_g1_i1 from sample A1 / Example spliced isoformTGATTATCTATTGATATCCTAGGACTATACGACATTAATACTTTCCTTGTCAACGTTACCATGGAAACTTTAAACTTAAACCCTCTCAAAGTTTTTTCCATCAGCTTAAACCTTACAAAACCCCTCTGAACAAAATCAAACTCTGAGCTTTGGAGTCCTTTAGCGATGGCGAAACCTTTTCTCATATTTACAACACGAAG
GATTATCGAGGCATCCTCCACGAAGCTGCTGCGATCCGGGACGATTTCTGCTGCAAGTGCGGCGAAAATCAGCTCGATCCCATATTTACAAGGTGCAGAACATTCGTCTGAACATTTCGATTATTCCTTTACTGTTTTTGGTGCAGGAAATGGCCCCGGATCGTTTCAAAACAGTCCTGCATTGTTCCCCACAGCCCCAT
GGAACCGTAAATACTCCACAAAGGTTTCTAATGAACCGAAAACTGAAAAAAAGACGGGGAAAGGGGCTAATGGAACCGGAGAAAAAGGGGCGAAAGCTAAAGATAAAACCCTGGAGCTCTCAGACTCTGAAAAGATTTGCCTAATTCTAGGAGATGTAAATTTGGAAGATTTGGTGGAGAAATTAGAGGAAACTGGAATT
GAAATTAATCCCATTTTGTTTGAACAAGTGATGGCGAAGGTTTCAAAGGATGCAGGGAGAAGGGTTATAAGGTTCTATAAATGGGCACTAGAACAGCCGGTATTCGAGCCGAATGTAGAGATTTTCAATGCTGTAATAGACTTTTTGGGAAGAAGGAAAGATTTCAAGGCAGTTCAGACTTTGCTCAAAGAAAATGTGTC
ATCTGGCCACTATGATGTTGGTGTACCAGTTGATCTGAAGACCTTTGAGATTGTTGTGGAAAGGCTTGTTAAGGCAGGCAGAGAGAAGCATACTGTTGATTTCTTCAATAAAATGGAGGAGTATGGGTTTAAGCAGAATGAAGAAGCTCAGAAGATTGTCGTCGAATGGCTTTGTGAGAGAGGGTTTGCAAGTCATGCAG
AGAAGTTAGTGAAAAATTTGGCAGATACGTATTATCCCGATGAAGAGATCTGTAATACACTCGTCAAAGGCTGGTGCGTTGCGGGGAAATTGAATGAAGCCGAGAGAATGATGGATGAGATGTCAGTTGGACAAATTGCCAAGGGGGTGATGGCTTACAATGCTTTGCTTGATTGCATTTGCAAGTTGTGCCGAGAGAAG
GACCCTTTTCGGCTTTTGCCTGAAGCCAATAAGATCCTCGTTGAAATGGAGGCAGCAGGTGTGCCTCGCAACGAATCGACCTTTAATATCCTTATTACCCATTTATGCAAAATCCGAAAAACTGAGGATGCTTACCAGCTCTTCTTGAAAATGGAAGAATATGGTTGCTCACCGAACTTGACCACTTATGTTGTTCTCAT
CAGGAGTCTGTTCCAGGCAGCTAGAGTGGCTGAGGGCCATGAAATGCTGGATGGGATGAAGAAAGCTGGCTTTGAGGCAAATGTGAAAGCTTATTATAGCTTCATCAAAGTTTTATGCGGAATTCAACGAATCGAGCATGCTCATAAAGTCTTCAGCACAATGAAAAGACATGGTTGCCTTCCTGGGAAAGAAACTTTTG
AGCTGCTAATCCCTAAGCTCTGTGAAATTGGGCATACCGGCAAAGCTAAGGGACTATTTCGTGAAGCTGTTGCAAAAGGATTGATGCCTAGCAGTAGACAAGATATACTTGAAGAAAGCAAAGTTAAAAAGCCTGTGAAGGTAAAAAATGAGAAGCCCAAAAGATTGACATTGCCAATGATAAAAAAGAAGAAGAATCTG
AGACTGAAGAGGATCAGGTTGAGTTTTGTTAGGAAGCCAAAGAAATCCAGGAGGCTACGTTATTGATGGAACTGGCTCTACAATGAAAGAATGATGAGATACCCCTGCAACATATGCGGACTCATATTTTGAGACCACCACGAGAAGGTAGTTGCCCACTTTATATGCAACAAGGGTGAAGATATTTGAACATACTATTC
TTTTGAAGAGTAGTGCAATGAAATGTTGCAAACAGCAAATTGACATGAAGCAAACAATAGCTGATGAAGTTGTCACACTTGATGAAGAGTACTGTTTTGAAGTTTGAACATTTCCCCATTACTGCTGATTTTTGACAATTAAATGAGTAAATGTTGGCACACATTTTATTATCAAGTTGAAATTTAAATTCCAATATTGA
ATATGGTATGTTGTTTCATTGTTCAAGAATGGTATTATGGTTAGACTTAAATTTTGTTCCTTGGTATTATAAATCATGGTTAACTTGTCG
>TRINITY_DN116150_c0_g1_i2 from sample A1 / Example unspliced isoform:TGATTATCTATTGATATCCTAGGACTATACGACATTAATACTTTCCTTGTCAACGTTACCATGGAAACTTTAAACTTAAACCCTCTCAAAGTTTTTTCCATCAGCTTAAACCTTACAAAACCCCTCTGAACAAAATCAAACTCTGAGCTTTGGAGTCCTTTAGCGATGGCGAAACCTTTTCTCATATTTACAACACGAAG
GATTATCGAGGCATCCTCCACGAAGCTGCTGCGATCCGGGACGATTTCTGCTGCAAGTGCGGCGAAAATCAGCTCGATCCCATATTTACAAGGTGCAGAACATTCGTCTGAACATTTCGATTATTCCTTTACTGTTTTTGGTGCAGGAAATGGCCCCGGATCGTTTCAAAACAGTCCTGCATTGTTCCCCACAGCCCCAT
GGAACCGTAAATACTCCACAAAGGTTTCTAATGAACCGAAAACTGAAAAAAAGACGGGGAAAGGGGCTAATGGAACCGGAGAAAAAGGGGCGAAAGCTAAAGATAAAACCCTGGAGCTCTCAGACTCTGAAAAGATTTGCCTAATTCTAGGAGATGTAAATTTGGAAGATTTGGTGGAGAAATTAGAGGAAACTGGAATT
GAAATTAATCCCATTTTGTTTGAACAAGTGATGGCGAAGGTTTCAAAGGATGCAGGGAGAAGGGTTATAAGGTTCTATAAATGGGCACTAGAACAGCCGGTATTCGAGCCGAATGTAGAGATTTTCAATGCTGTAATAGACTTTTTGGGAAGAAGGAAAGATTTCAAGGCAGTTCAGACTTTGCTCAAAGAAAATGTGTC
ATCTGGCCACTATGATGTTGGTGTACCAGTTGATCTGAAGACCTTTGAGATTGTTGTGGAAAGGCTTGTTAAGGCAGGCAGAGAGAAGCATACTGTTGATTTCTTCAATAAAATGGAGGAGTATGGGTTTAAGCAGAATGAAGAAGCTCAGAAGATTGTCGTCGAATGGCTTTGTGAGAGAGGGTTTGCAAGTCATGCAG
AGAAGTTAGTGAAAAATTTGGCAGATACGTATTATCCCGATGAAGAGATCTGTAATACACTCGTCAAAGGCTGGTGCGTTGCGGGGAAATTGAATGAAGCCGAGAGAATGATGGATGAGATGTCAGTTGGACAAATTGCCAAGGGGGTGATGGCTTACAATGCTTTGCTTGATTGCATTTGCAAGTTGTGCCGAGAGAAG
GACCCTTTTCGGCTTTTGCCTGAAGCCAATAAGATCCTCGTTGAAATGGAGGCAGCAGGTGTGCCTCGCAACGAATCGACCTTTAATATCCTTATTACCCATTTATGCAAAATCCGAAAAACTGAGGATGCTTACCAGCTCTTCTTGAAAATGGAAGAATATGGTTGCTCACCGAACTTGACCACTTATGTTGTTCTCAT
CAGGAGTCTGTTCCAGGCAGCTAGAGTGGCTGAGGGCCATGAAATGCTGGATGGGATGAAGAAAGCTGGCTTTGAGGCAAATGTGAAAGCTTATTATAGCTTCATCAAAGTTTTATGCGGAATTCAACGAATCGAGCATGCTCATAAAGTCTTCAGCACAATGAAAAGACATGGTTGCCTTCCTGGGAAAGAAACTTTTG
AGCTGCTAATCCCTAAGCTCTGTGAAATTGGGCATACCGGCAAAGCTAAGGGACTATTTCGTGAAGCTGTTGCAAAAGGATTGATGCCTAGCAGTAGACAAGATATACTTGAAGAAAGCAAAGTTAAAAAGCCTGTGAAGGTAAAAAATGAGAAGCCCAAAAGATTGACATTGCCAATGATAAAAAAGAAGAAGAATCTG
AGACTGAAGAGGATCAGGTTGAGTTTTGTTAGGAAGCCAAAGAAATCCAGGAGGCTACGTTATTGATGGAACTGgcctttcaagttcatcaaatatatccagctaacaaaccattcttgcaattcattactagGCTCTACAATGAAAGAATGATGAGATACCCCTGCAACATATGCGGACTCATATTTTGAGACCACCAC
GAGAAGGTAGTTGCCCACTTTATATGCAACAAGGGTGAAGATATTTGAACATACTATTCTTTTGAAGAGTAGTGCAATGAAATGTTGCAAACAGCAAATTGACATGAAGCAAACAATAGCTGATGAAGTTGTCACACTTGATGAAGAGTACTGTTTTGAAGTTTGAACATTTCCCCATTACTGCTGATTTTTGACAATTA
AATGAGTAAATGTTGGCACACATTTTATTATCAAGTTGAAATTTAAATTCCAATATTGAATATGGTATGTTGTTTCATTGTTCAAGAATGGTATTATGGTTAGACTTAAATTTTGTTCCTTGGTATTATAAATCATGGTTAACTTGTCG