sp|Q93VH6|GIF3_ARATH ----> GRF1-interacting factor 3
Intron 1 ATCAGCAACA ... CATCAGCAAC
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50.81 | 86.3 | 86.4 | 91.8 |
| A2 | 52.72 | 52 | 58.8 | 57.3 |
| A3 | 51.72 | 51.2 | 54.6 | 55.2 |
| A4 | 53 | 29.6 | 34.4 | 32.6 |
| A5 | 49.33 | 17.6 | 17.2 | 17 |
| A6 | 52.85 | 136.8 | 151.6 | 155.2 |
| A7 | 52.27 | 282.7 | 302.5 | 316.9 |
| A8 | 50.99 | 325.4 | 332 | 344.5 |
| A9 | 52.16 | 349.2 | 387.5 | 373.9 |
| A10 | 52.65 | 307.6 | 332.4 | 351.3 |
>TRINITY_DN115987_c6_g1_i2 from sample A2 / Example spliced isoformCCGTCCTTGAAATTGTTTAAAAAAAAAAAAAAAAAAACACACCTATCAAGTTAACCCCTCCACCATCAGTGGGTCGCTCGAAGTCTTCGTCTAACTGTAGTCTTGTTAGTCACCTTGTTCCCCCTTCGGATATTTGGAACGGTAAACCCCAGTGTTCCCTTTTTATCCCAGTGGTAATTTTCTTGGTAGATCTTGTAAAC
CTCTGCGTTCCCTATTTTCTCCCGAGGTATTTTTCTCGGCACATCTTGTAAACCCCAACGTCAAAGACATAATTATCATAAAATTTTGAGCCTCCTTAAGCAGACGAAGGTCCCTGGAAGAGTCAAATTTTAGCTGGAAGCAACTTGTGGGTGCTCTATTTGGAGTTTTGGTGTGCGGATTATACTATTTAGCATGGTGG
TACTGTAGAATTTGGGAGAGAGTAGAAGAGCTACAAACACTCAACAGAAAGATAGAAGTAAGATACAGCAACACCCAATGCAGGGGCACCAGATGCAACCCATGATTCCGACATTTGCCACTGCCAACATCACTACAGAGCACATCCAGAAGTACTTGGATGAGAACAAGCAGTTAATTCTGGCAATTCTTGATAACCAA
AACTTGGGAAAGCTTAATGAATGTGCACAATACCAAGCAAAACTGCAGCAGAATCTGATGTATTTGGCTGCCATTGCTGATTCTCAACCTCAACCGCCAGCAGCTCATTCTCAGATGACACCAAATGCTGCAATGCAGCCTGGCACACATTACTTGCAACACCAACAAGCACAACAACAAGTAGCACAGTCTGTCATGGC
AAGTAGGTTTCCTATGCAACAGCTACAACAGGAACATCAGCACCAACAGCAACTGCAGCATCAGCATCAGCAACAGCAGCATCAGCAGCATCAGCAACAGCAGCATCAGCAGCAACAGCATCAGCAGCAACAGCAACAGCAGCATCAGCAACAGCAGCAGCAATTGCAGCATCACCAGCATCAACAATCTATTCACAGCC
AGCTAGGAATGAGCTCTGGAGGAAATAATGGATTACAAATGCTACACAGTGAGGCAGGAATGGGAGGCAATGGACCTCTCTCCTCTAGGGGCTTACCTGACTTTGGGCGTGGTGCTTCCGGTAGCACTGGAGAAACCATGCAATCAAACAGGGGTTTGGGTGCAGATACACGTGTTGGCAATAAACAAGATGGTGTTTCC
TCGGAAAATGCCCATCCAGGTTCTGGTGATGTACATGGCAATTCAACAGGACACAATGCAGATGAATCAGAGCCATTGTACTTGAAAGGCCCAGAAGAAGAAGGGAATTAGATAGATTTCCATAGGTCTGCTGGAGTCAATATGGGCAGTATGTAAGCTGTTGGATGACTGCAGAATGAATCAGAACGGCTAAACCTGAA
AACCTCCAAACAATTGGAAAAGTAGGATTTGCCAATGATACTATACTAGGATTTCCATGTTCAACTTTAGACACTGGTGCAGATTGAGTTTCATAACATTAGCTAAAGTAAATTTTTTATGAGATTCGGTAGCATATTTTCAATTACTCTCCATGGCATGCAGACCTTACTGAATCTTAATGGTTATTGGAGTTTGTTTA
AGGACTAATGTGGATTGATAGCGGTTGGGCCAAAGTAAATATGACTTCCTGTTAATCTTTGCCTGTGTTCTG
>TRINITY_DN115987_c6_g1_i5 from sample A2 / Example unspliced isoform:CCGTCCTTGAAATTGTTTAAAAAAAAAAAAAAAAAAACACACCTATCAAGTTAACCCCTCCACCATCAGTGGGTCGCTCGAAGTCTTCGTCTAACTGTAGTCTTGTTAGTCACCTTGTTCCCCCTTCGGATATTTGGAACGGTAAACCCCAGTGTTCCCTTTTTATCCCAGTGGTAATTTTCTTGGTAGATCTTGTAAAC
CTCTGCGTTCCCTATTTTCTCCCGAGGTATTTTTCTCGGCACATCTTGTAAACCCCAACGTCAAAGACATAATTATCATAAAATTTTGAGCCTCCTTAAGCAGACGAAGGTCCCTGGAAGAGTCAAATTTTAGCTGGAAGCAACTCTTTTTTAGCTGGAAGCAACTTGTGGGTGCTCTATTTGGAGTTTTGGTGTGCGGA
TTATACTATTTAGCATGGTGGTACTGTAGAATTTGGGAGAGAGTAGAAGAGCTACAAACACTCAACAGAAAGATAGAAGTAAGATACAGCAACACCCAATGCAGGGGCACCAGATGCAACCCATGATTCCGACATTTGCCACTGCCAACATCACTACAGAGCACATCCAGAAGTACTTGGATGAGAACAAGCAGTTAATT
CTGGCAATTCTTGATAACCAAAACTTGGGAAAGCTTAATGAATGTGCACAATACCAAGCAAAACTGCAGCAGAATCTGATGTATTTGGCTGCCATTGCTGATTCTCAACCTCAACCGCCAGCAGCTCATTCTCAGATGACACCAAATGCTGCAATGCAGCCTGGCACACATTACTTGCAACACCAACAAGCACAACAACA
AGTAGCACAGTCTGTCATGGCAAGTAGGTTTCCTATGCAACAGCTACAACAGGAACATCAGCACCAACAGCAACTGCAGCATCAGCATCAGCAACAGCAGCATCAGCAGCatcagcaacagcagcatcagcaacATCAGCAACAGCAGCATCAGCAGCAACAGCATCAGCAGCAACAGCAACAGCAGCATCAGCAACAGC
AGCAGCAATTGCAGCATCACCAGCATCAACAATCTATTCACAGCCAGCTAGGAATGAGCTCTGGAGGAAATAATGGATTACAAATGCTACACAGTGAGGCAGGAATGGGAGGCAATGGACCTCTCTCCTCTAGGGGCTTACCTGACTTTGGGCGTGGTGCTTCCGGTAGCACTGGAGAAACCATGCAATCAAACAGGGGT
TTGGGTGCAGATACACGTGTTGGCAATAAACAAGATGGTGTTTCCTCGGAAAATGCCCATCCAGGTTCTGGTGATGTACATGGCAATTCAACAGGACACAATGCAGATGAATCAGAGCCATTGTACTTGAAAGGCCCAGAAGAAGAAGGGAATTAGATAGATTTCCATAGGTCTGCTGGAGTCAATATGGGCAGTATGTA
AGCTGTTGGATGACTGCAGAATGAATCAGAACGGCTAAACCTGAAAACCTCCAAACAATTGGAAAAGTAGGATTTGCCAATGATACTATACTAGGATTTCCATGTTCAACTTTAGACACTGGTGCAGATTGAGTTTCATAACATTAGCTAAAGTAAATTTTTTATGAGATTCGGTAGCATATTTTCAATTACTCTCCATG
GCATGCAGACCTTACTGAATCTTAATGGTTATTGGAGTTTGTTTAAGGACTAATGTGGATTGATAGCGGTTGGGCCAAAGTAAATATGACTTCCTGTTAATCTTTGCCTGTGTTCTG